tnfsf10l4 (LOC107741286,LOC107680360,LOC107565437)


Basic Information

Item Value
gene id tnfsf10l4
gene name LOC107741286,LOC107680360,LOC107565437
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 11619110 ~ 11621440 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043239836.1
GCGCGGAAGAGCGGAACCAGCGCACAGACCTTTGACTCCACAAGGATACGACAGGAAAAGCaactttctctttctgtcatgCGAGCATTCTGTAAAAACGCTGTCGGAACATGACATCAAACTTACCAAACAGCCCCAGTTACAGCCAGCTGGACGAAAGCACGTCTGAATACAAAACCTCAAAGGGCCAATACATGCTCTTCTTGATTCTGACTTTAATATTAAGCACGGAGACGTTTATCACGGCTTTTCTACTTTATGATTTCTCCGAGGATATTCACAGAactcGTGACGGAGGCAAAGATGGAGGGTATCCAGTCCACTGTCTCTCCACGGATCTTACCCAACCGACATATCCAGCAGGTATCGCAAGCTGTGACTTGTTCAATCAAGAACTGGAGCAAACCGCACAGCAGAGACTGCTGCTGGACATACAGAATTATGTACTGAGAACATTAACagaacataACGTCACTGATATTTTCAAACCAGCTGTGCACGTCGGGGCAAAACAAGGGCTTAAACAATATCAAAGGCTGCAGATAAACGACAAAATGCCTGAACTGGATCGCATTCAATGGGACAATATAAACGGCCAGTTCAGTCAGGAAGGATTAATGCGGCTGAGCCCGGAAGGAGAAATAGAGGTGCCACAAGATGGAATTTACTTCGTTTTCTCTCAGATTCATTTCGAAACACAATCAGGACAGAGTATGCACTTTAACCAGTACTTATACAAGAGGACAGGGTCCTATCCACGACCAGTGATGCTCGCAAAATCTGTGTTGACTTCCTGCGCAAGCGCAAACTCTAGTGTACAGCTTTATTCCAGTCATCAGGGGGCGCTGTTCCGCCTAGAAAAGGGTGACAGGCTCTCATTGTTCGTGCTGGATATTAGCGCCGTGCGCTTCCCACAGGAAGCCACTTATTTCGGGGCATTCATGATTAACTAAGCAAACCAGCagagttttatttcagttggtATCTTACAGAGATTATATACTTGACATTTGTTTACCAGAGAAATATtcgtaaaatatatacatactgaaataatgaatgacactttttttaaaccacactAAGACtaaatgggtttttttctgaaatgtttattgTAACTTAAATTCTTTTGTatgatgaaaatatgaataacagtttgttttaatgacATTAAACTATAcgagtttatttttattgttatcag

Function

NR:

description
PREDICTED: tumor necrosis factor ligand superfamily member 6-like

GO:

id name namespace
GO:0006955 immune response biological_process
GO:0005615 extracellular space cellular_component
GO:0016020 membrane cellular_component
GO:0005125 cytokine activity molecular_function
GO:0005164 tumor necrosis factor receptor binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043239836.1 True 1207 mRNA 0.42 5 11619110 11621440

Neighbor

gene id symbol gene type direction distance location
mtnr1c mtnr1c,LOC107756550,LOC107741285,LOC107672899,LOC107680355,LOC108442058 coding downstream 19268 11583955 ~ 11599842 (-)
vma21 vma21,LOC107741184,LOC107565438,LOC107680358,LOC107756551,LOC107672888,LOC107597345 coding downstream 36297 11580834 ~ 11582813 (-)
npas2 npas2,LOC107672582,LOC107597247,LOC107741183,LOC107565421,LOC107680380 coding downstream 45147 11527062 ~ 11573963 (-)
radx LOC107672617,LOC107756553,LOC107680386,LOC107597314,LOC107680354 coding downstream 93073 11519575 ~ 11526037 (-)
brwd3 brwd3,LOC107672566,LOC107680390 coding downstream 156349 11442622 ~ 11462761 (-)
rpl36a LOC100304549,LOC100219516,LOC106514001,LOC103353280 coding upstream 28999 11650439 ~ 11652716 (-)
LOC122345659 NA coding upstream 60780 11682220 ~ 11689922 (-)
LOC122345938 NA coding upstream 82791 11704231 ~ 11707716 (-)
arhgap20b LOC107672940,LOC107597255,LOC107663218,LOC107746244,LOC107573640 coding upstream 110079 11731519 ~ 11768014 (-)
fdx1b LOC107672951,LOC107746235,LOC107597349,LOC107741288,LOC107663211 coding upstream 156172 11777612 ~ 11786143 (-)
G35434 NA non-coding downstream 288744 11304281 ~ 11330366 (-)
G35522 NA non-coding downstream 306280 11311549 ~ 11312830 (-)
G35450 NA non-coding downstream 369104 11249199 ~ 11250006 (-)
G35499 NA non-coding downstream 398219 11219968 ~ 11220891 (-)
G35501 fam76b,LOC107680374,LOC107592275,LOC107687655,LOC107597227 non-coding downstream 405373 11212039 ~ 11213737 (-)
G35592 LOC107741189,LOC107680392,LOC107565414,LOC107733362,LOC107597318 non-coding upstream 49517 11670957 ~ 11674817 (-)
G35594 NA non-coding upstream 71110 11692550 ~ 11694947 (-)
G35597 NA non-coding upstream 74751 11696191 ~ 11697674 (-)
G35599 NA non-coding upstream 76508 11697948 ~ 11699666 (-)
G35601 NA non-coding upstream 79793 11701233 ~ 11703708 (-)
hmgn7 hmgn7,LOC107672554,LOC107756557,LOC107680402,LOC107565427,LOC107748629,LOC107597243,LOC108260037,LOC108442050 other downstream 151988 11419955 ~ 11467122 (-)
slc25a15b slc25a15b,LOC107744499,LOC107687678,LOC107599942,LOC107726376,LOC107672737 other downstream 649992 10960311 ~ 10969118 (-)
G35384 NA other downstream 692947 10923927 ~ 10926163 (-)
G35371 znf703,LOC107599934,LOC107672788,LOC107744445,LOC107687685,LOC107726392,LOC107592299 other downstream 745046 10868364 ~ 10874064 (-)
G35122 NA other downstream 1157401 10461208 ~ 10461709 (-)
msna msna,msn,moes,LOC107746233,LOC107597256,LOC107672695,LOC107663223,LOC107741191 other upstream 174216 11795656 ~ 11815944 (-)
sh2d1aa sh2d1aa,LOC107713049,LOC107741293,LOC107663232,LOC107557102 other upstream 543963 12165403 ~ 12169410 (-)
G35825 tenm1,LOC107557119,LOC107713050,LOC107597323,LOC107741271 other upstream 696363 12317803 ~ 12319685 (-)
G35936 NA other upstream 880474 12501914 ~ 12505958 (-)
G36047 NA other upstream 1432404 13053844 ~ 13054857 (-)

Expression


Co-expression Network