unc5db (unc5db,unc5d,LOC107673416,LOC107709861,LOC107659286)


Basic Information

Item Value
gene id unc5db
gene name unc5db,unc5d,LOC107673416,LOC107709861,LOC107659286
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 9579488 ~ 9681801 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043239837.1
TTCTGCTAGTGAGCGTGCGGCACCTGCGAGTCTGAGCGCACTGGAACGAGGCTCCGAAGCAGCGCACAAGCCGGCGCGGCGTCTGAAGTTCGGCACACAGGAACGATGTCCGCTAAGCTTTCGCAAAGAAGTCAGGGCGTTAAAGTGAGGGAAAGACCGCTGACGCAAAAAATAAGGAACTGTCACAACATTATAAAACCGGGCGAATGTACCCCCTAAAATGACCGAGagaaacagaatagaaatggGAAGTACTGTGAAGAGACGTCGGCGCTTTTTGGAGATCATCTCGGCTCTCGCGCTCTGTGCAGCCCTCGTCAGCGGTCGAGGAACTGCCAGTGACGCCCTTGCTGATTCTCTGTCATCAGTTGGTGGGACATTACCTCACTTCCTGCAAGAGCCTGAGGATGCTTACATAATCAAAAACAACCCAATCAAGCTGCGCTGTCGAGCAACTCCTGCCCTGCAGATCTTCTTCAAATGTAATGGGGAATGGGTCCATCAGAGCCAACATATCTCACAAGAGTACATGGACCAAAACACTGGGCTGAAAATCCGTGAAGTGACTATCAATGTTACCAGGCAGCAGGTGGAAGATTTTCATGGTCCAGAAGACTACTGGTGCCTGTGTGTGGCCTGGAGTCACCTGGGAACCTCGAAGAGTCGTAAGGCTACAGTGAGGATAGCCTACCTCCGCAAGAACTTCGAGCAGGATCCTCAAGGGAAGGAAGTGCCAATCAAGGGCATGATTGTGCTGCATTGCCGTCCCCCGGAGGGAGTGCCCATGGCAGAGgtgGAGTGGTTAAAAAATGAAGAACTGGTTAGCTCTCTTGAAGACGATAACATTGACACTCGTGCTGACCACAATCTGATCATCAATGAAGCCCGACTCTCCGACTCCGGCAACTACACCTGCCTCGCCAGTAACGTAGTTGCAAAAAGACGCAGTGCTACAGCTACTGTAGTTGTGTTTGTGAACGGTGGATGGTCTCTGTGGACAGAGTGGTCTCCTTGCAGCGTGAACTGTGGGAGAGGAGTTCAGAAGCGATCTCGGACCTGCACTAACCCGGCTCCTCTGAACGGGGGAGCGTTCTGCGAGGGCATGTCTGTGCAGAAGATCACCTGCAATGCACTGTGTCCAGTTGATGGAGTCTGGGAGGAGTGGAGCGAGTGGACGATGTGTAGCGCGCAGTGTGAGAGGCAGCGTTGGAGGGAGTGCAATGCGCCACCGCCCCGTCACAGAGGCAAGATGTGCGAGGGAGAAGGTCAAAGCACGGAGAACTGCACGGGAGGACTGTGTACGCAAAATGGGAAGCTGATGCATGATGTTAAGCCTCAGAGCATGGACAACTCTATTGATGTTGCACTGTACTCTGGTTTGGCTGCGGGGGTGATCGCTGTGGTCGTCCTCATAGTGGCCATCACCCTCTACAGGAAGAGTCAAAGTGAGTATGGAGTGGACGTCATTGACTCATCTGCTCTTGCTGGCGGCTTCCAGTCCTTCAACTTCAAAACTACCAGACAGGGAAATCCACTTCTGCTGAATTCCTCCATGCAGCCCGATATAACTGTCGGCCAGACGTACAGCAGCCCGATCTGTTTTCAGGACTCCATAGACAAAGAGCTCTTTGACCCCCTGCCAGACAAGGTCAAAGTTCAGAGCTCCTTTATGGTTTCACTAGGTGTGGCGGACCGAGCCGAGTACCATGTGAAAACCCATCCGGAGACTCTTCCTCCTAACCTTCACCCAAACTACAGCACAGTGGAAGGAAAGAAGACCACTATTATTTCTCCTAATGGCATTCACACACTCAGGAAGACACAGTTCAAGACAAGCGCTGTGTTTGGGCACCTGGGTGGGCGTTTAGTCATTCCAAATGCAGGAGTAAGCTTGCTGGTACCTCACGGGGCAATTGCTGATGACACCTCTTGGGAATTGTACATGCTCATAAATCAAGAAGACTCTAGTGACCAGTCAGAGGAAAGGTGTGAGATTCTGTTAGGGCCAGAGATCACGTATGGACCTCCGGGGCTGAACCTGTCCTATCCTGTTGCCATGACGATAGCTCATTGTGCTGAAGTCAGCGCAGAAAACTGGAACATTAAACTCAAGAGACAAACCAAGGACAACAAGTGGGAGGATATAATGTCAGTAGATGAGGAATCAACCTCCTGCTATTGCCTGATGGACTCGCATAACTGTCACTTGTTGCTGGATCAGCCGGGCTGTTATGCACTAGTGGGGGAACCTATCACAGATGCTGCCATAAAGAGACTAAGGATTGCTGTGTTCGGCAGTATGGAGGCCTCCTCCATGGACTACAGCCTGCGAGTGCACTGTGTAGACGACACACCGCATGCCTTTCAGAGAGTGGTTACTGCTGAAACCAGCAGAGGAGGTCAGCTTCTCGAGGAGCCCAAGATGCTGTTCTTCAAAGGAAACTGCCTCAGTCTGCAGGTGTCCATCCAGGATATCCCTCAGTTTCTGTGGAGCATCAAACCCTTCACCACCTGTCAGGAATTCTCCTTCACCCAAGTGTGGTATAGTAACCAGCAGCCTGTGCACTGTGCCTTCTCACTGCAGAGACATAGCGCCTCAACCACCCAGCTCTCCTGCAAGATCAGTGTGCggcaggtcaaaggtcacgagCAGATCCTGCAGGTCTACACCTCAGTGGGAGAGagtgagaaagagataGTCCCATTTTTTATGCAGGCAGATTGCACAGTGACTTCACAGACGGGGGCCAAAGCCTTCAAAATCCCCCTGTCCATACGTCAGCGGATATGCACCACCTTCGATACTGCCAACGCCAAGGGCAAGGACTGGCAGCTCTTAGCTCAGAAACTCCACATTCAAAGGAACTTGTCCTACTTTACCAAGCAGAAGAGTCCCTCTGCTGTCATTCTCAGTCTCTGGGAGGCCAGGCATCAGGACAGTGGAGATCTTGACTCCCTTGCAAGTGCTTTGGAGGAGATCGGAAAGATCCACTGTAAAAGTCTGCCTCAGAGTCCAGATGACAAAGAAACAGACTTTACATTCTGAAGGACTACTTCACCAGGTGCAGTCCCCCAGCATCTTCAGTTTGGAGTCCAAGCAGAGCCAGCTGAGGCATACCCAGTCTGACAGAAGACTCGACAAAATGCGACCAATCAGACGGTTACACATATCTGTACATGTGCGAAGAAAGTATGAGTTGGTATGAATTTGGCACAGATTTAACAgcttcaaaatactttttttaaagtgccaAGACATCACAACTTTCATTACAATTACGCCTTAGTCTTTCCTCTgtgtttatgattttattattattagtattattattattgtgtgggATTTGAATAGTGACCAGACTGGGATGTTTTTGAGCATTTCCTTGTGTCAGCATtacaattaaaggaatagtccatCCAGAaatcactcaccctcatgtcactttttgactttttcccTTTAGAACTAGTGtcgtcaaatgattaaatgcgatttattgcattaaaatacatt

Function

symbol description
unc5db Predicted to enable netrin receptor activity. Predicted to be involved in axon guidance. Predicted to act upstream of or within netrin-activated signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Is expressed in brain; hindbrain; telencephalon; and thalamus. Orthologous to human UNC5D (unc-5 netrin receptor D).
unc5d Predicted to enable netrin receptor activity. Involved in cell-cell adhesion via plasma-membrane adhesion molecules. Predicted to be located in cell surface and plasma membrane. Predicted to be integral component of membrane.

NR:

description
PREDICTED: netrin receptor UNC5D

GO:

id name namespace
GO:0007165 signal transduction biological_process

KEGG:

id description
K07521 UNC5; netrin receptor unc-5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043239837.1 True 3514 mRNA 0.50 17 9579488 9681801

Neighbor

gene id symbol gene type direction distance location
hdr LOC107659287,LOC107721544,LOC107673363,LOC107709863,LOC107594999 coding downstream 3681 9571202 ~ 9575807 (-)
LOC122345250 cyb561a3a,LOC107673362,LOC107721551,LOC107595000,LOC107659288 coding downstream 10194 9566515 ~ 9569294 (-)
zgc:153409 LOC105896809,LOC106958509,LOC103460788,LOC103154043,LOC107671222 coding downstream 13556 9565479 ~ 9565932 (-)
LOC122345251 histh1l coding downstream 16192 9561925 ~ 9563296 (-)
loxl2b loxl2b,LOC107673422,LOC107721556,LOC107659291,LOC107709858 coding downstream 21117 9535533 ~ 9558371 (-)
tm2d2 tm2d2,LOC107709865,LOC107673424,LOC107750179,LOC107672780 coding upstream 68851 9750652 ~ 9752957 (-)
tbx3b LOC107709835,LOC107592413,LOC107673376 coding upstream 72233 9754034 ~ 9757833 (-)
araf araf,LOC107709867,LOC107595004,LOC107673380,LOC107750175,LOC107672764 coding upstream 99037 9780838 ~ 9791734 (-)
imp4 imp4,LOC107595005,LOC107709870,LOC107750176,LOC107592341,LOC107672800 coding upstream 110386 9792187 ~ 9796033 (-)
rabl6b rabl6b,rabl6,LOC107750171,LOC107672784,LOC107673384,LOC107709868 coding upstream 116493 9798294 ~ 9808373 (-)
G34704 NA non-coding downstream 331447 9246920 ~ 9248041 (-)
G34594 NA non-coding downstream 518674 9013306 ~ 9060814 (-)
G34607 NA non-coding downstream 588175 8991101 ~ 8991313 (-)
G34606 NA non-coding downstream 588465 8988611 ~ 8991023 (-)
G34583 NA non-coding downstream 645349 8933911 ~ 8934139 (-)
G34869 NA non-coding upstream 82272 9764073 ~ 9764532 (-)
G34871 NA non-coding upstream 84467 9766268 ~ 9766607 (-)
G34877 NA non-coding upstream 95832 9777633 ~ 9778238 (-)
G35035 NA non-coding upstream 599608 10281409 ~ 10296141 (-)
G35047 NA non-coding upstream 655946 10337747 ~ 10341167 (-)
G34789 vps37b,LOC107594993,LOC107673398,LOC107656485,LOC107587312,LOC107709855,LOC107721558 other downstream 176865 9337828 ~ 9402623 (-)
vamp5 LOC107594989,LOC107681225 other downstream 358960 9215498 ~ 9220528 (-)
G34580 LOC107681240,LOC107709820,LOC107560234,LOC107715750 other downstream 649435 8929470 ~ 8930053 (-)
LOC122345093 NA other downstream 901770 8674229 ~ 8677718 (-)
timm8b timm8b,LOC107717885,LOC107598437 other downstream 1147902 8429700 ~ 8431586 (-)
si:dkey-96l17.6 si:dkey-96l17.6,LOC107672751,LOC107738297,LOC107592400,LOC107744487,LOC108434467,LOC105902719 other upstream 643158 10324959 ~ 10335343 (-)
G35122 NA other upstream 779407 10461208 ~ 10461709 (-)
G35371 znf703,LOC107599934,LOC107672788,LOC107744445,LOC107687685,LOC107726392,LOC107592299 other upstream 1186563 10868364 ~ 10874064 (-)
G35384 NA other upstream 1242126 10923927 ~ 10926163 (-)
slc25a15b slc25a15b,LOC107744499,LOC107687678,LOC107599942,LOC107726376,LOC107672737 other upstream 1278510 10960311 ~ 10969118 (-)

Expression


Co-expression Network