LOC122345582 (LOC107548437,LOC107746434,LOC107734131,LOC107596189,LOC107661243)


Basic Information

Item Value
gene id LOC122345582
gene name LOC107548437,LOC107746434,LOC107734131,LOC107596189,LOC107661243
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 13965155 ~ 13967827 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043239846.1
CATCTCAAATCACTGCTGGCGACTGAGCAATCAAGTACTAGCTTTCAAACAGAGATGTTTCGGCGGTGTCTGTCTCCTCTTtgcatcctcatcctcatctgttTGGTGTTCACAAACTCTTCTTACCCTTTTGGACACAGAGGGGCGCTGTCCTTCTCCAATTCATTGCGCCTTACTCTCTCTATTCGTGCACGTGTTCAGCAGCTGCTGTCCCGCTACaaaCAACAGCTGTTTGGCGACGAGCTCTTTGAATACAGGGAGCTGATGCTGAATACGCTTCCCGCGGTCACCGTCAGCTATCGGACCTGGCTACGCATGCAGGACACTGAGCGTCTGCGTTTGGCCTCTCGCAACCTCCAAACTTTCTGGACTCATCTGGAAGTTCAACGGCAgcagctggagagagagagggacgcGACGAAGGAAAGAAGAGAGCAGAGAAGGGGCAAACGAGGAAGGCCTCAGCTCACCTTGTGCCAAAGATTCGATAGTCTGCAAGTAGATTTGCGGGACTTAATGAAACAAGTCAACTCTCAGTTGAACAGTCTGAGTATCACGGCATCTACAAATTCCCCACTTCTACACGCAACTTCATCTTCCAGTCCgactcccagcatgcatcatTCCACAGAGAGCACCACAATACTGCAGACCCCAACTCAGACAGATGATCATCGCAGCTCCACGCAGTCTTCTACTTCAGTGACGGAGAAGATTTCCGTCAGCCTTCCACAACCCACCCAGGCATCAGCAGGCTTAATTTTCACGGGAAGCCAGTTATCTGTGGACACCCTGCAGACAACAACAGCAGAGATGTCCCGCTGGATTCAGCATCTGAGGGGGTATGTGATACTGAGAGACCTGGAACGGTACTTAAGCAGATTGGCACGAGATTACTCTGTGCTCCAATCTAAATACTGACAAACGCACTTAAGTAATTTAACCAATGCggttaaaaaagtacaaaaaaaacaagtattgCACAAGTATTACACAGAATTAATTCTAAAACAAAACCAAGAAATTACGTAATTGAATACACTAACATTCATATCCATAAACATTTCCATGTCAGTTTCTGTTTACCttgtgctttaaatattttatttatgaaaataatttattactattttttatttactgtttgtttacaattaattaaacagattttactgcattctgtattttatatttaagtatttttgatGTATTTGGTAAGTCTCAGGGGTTCAGTACATCAGCAGGCAGCTAGTGTGGGTTATCATGAGATTgccaaacagtgtttttttgatCCAATAGTATTTTTAGATAATACAATTATTGTACTTGAATGTATATTTGTCTGTTTGAAGGGTAAGTgcgttattttatttatattggacaattttactgaaacaaaaaaaggttagtCAGCCATTCTGGAAGACCAAAATTCCCCAAACACCCCACTTCCCTCCTCTACTGTTAATCAGTAAATCAGAGGTCAGAATGAGATTTTACATCCCTTTTTCATTGTCATTCCCCTGTACTTTCCAccttgtgttatttattaaattatttattttatttatgtgatttatatttttttatagaatatttattgtttgtaattaaGTGCATaagtgaaatgtttattttgtacaagcttgatttgaataaaaccaTGAAGTGCATCTAGTGCATATTTGTGTgacagttttttcttcttttacatACAATAGACAGTAAGTAA

Function

NR:

description
PREDICTED: uncharacterized protein LOC107548437

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043239846.1 True 1732 mRNA 0.40 5 13965155 13967827

Neighbor

gene id symbol gene type direction distance location
chrm1b LOC107663375,LOC107548438,LOC107734116,LOC107596191,LOC107746419 coding downstream 24939 13938641 ~ 13940216 (-)
trnam-cau_27 NA coding downstream 120196 13844887 ~ 13844959 (-)
trnam-cau_26 NA coding downstream 126193 13838890 ~ 13838962 (-)
wdr44 LOC107548463,LOC107700250,LOC107746376 coding downstream 232672 13720781 ~ 13732483 (-)
il13ra2 LOC107700247,LOC107746374,LOC107693451,LOC107710577,LOC107548444,LOC107596132 coding downstream 312104 13646648 ~ 13653051 (-)
arhgap35b arhgap35,LOC107746386,LOC107596120,LOC107734134,LOC107663410,LOC108437035 coding upstream 19662 13987489 ~ 14000256 (-)
fxyd2 NA coding upstream 32732 14000559 ~ 14002075 (-)
scn4bb scn4bb,LOC107746389,LOC107599210,LOC107663372,LOC107661197,LOC107734128,LOC107596119 coding upstream 46587 14014414 ~ 14024552 (-)
mpzl2b LOC107599229,LOC107746390,LOC107663371,LOC107596204,LOC107661261,LOC107734129 coding upstream 60590 14028417 ~ 14032586 (-)
si:ch211-284e13.4 si:ch211-284e13.4,LOC107599204,LOC107663370,LOC107746440,LOC107734146,LOC107661201,LOC107596113 coding upstream 96722 14064549 ~ 14086478 (-)
G36337 NA non-coding downstream 145821 13818248 ~ 13819334 (-)
G36297 NA non-coding downstream 251735 13712680 ~ 13713420 (-)
G36224 LOC107700249,LOC107746377,LOC107548465,LOC107710575,LOC105912484,LOC105027847,LOC106603104,LOC106563440 non-coding downstream 253196 13708100 ~ 13711959 (-)
LOC122345175 NA non-coding downstream 321830 13619026 ~ 13643325 (-)
G36385 LOC107596209,LOC107734118,LOC107661259 non-coding upstream 7525 13975352 ~ 13977070 (-)
G36541 NA non-coding upstream 308269 14276096 ~ 14310067 (-)
G36561 NA non-coding upstream 342797 14310624 ~ 14310860 (-)
G36562 NA non-coding upstream 343135 14310962 ~ 14311328 (-)
G36537 NA non-coding upstream 343941 14311768 ~ 14320994 (-)
LOC122345901 NA other downstream 117085 13845403 ~ 13848070 (-)
G36336 NA other downstream 146213 13817742 ~ 13818942 (-)
G36298 NA other downstream 246612 13717124 ~ 13718543 (-)
lrch2 lrch2,LOC107700248,LOC107746375,LOC107710563 other downstream 265929 13654294 ~ 13699226 (-)
h3f3c h3f3b,H3F3A,LOC101073377,LOC105909691,LOC107388308,LOC105888650 other downstream 382865 13579061 ~ 13582290 (-)
tmprss13b LOC107746439,LOC107663381,LOC107599230 other upstream 34107 14001934 ~ 14009536 (-)
rnf214 LOC107663407,LOC107746393,LOC107599207,LOC107596114,LOC107734124,LOC107661199,LOC107599223 other upstream 73155 14040982 ~ 14056705 (-)
znhit1 znhit1,LOC107752359,LOC107661214,LOC106567874 other upstream 311847 14279674 ~ 14282620 (-)
LOC122345141 LOC107752369,LOC107661250,LOC107567461 other upstream 324236 14292063 ~ 14302381 (-)
pdzd2 pdzd2,LOC107746802,LOC107681406,LOC107661237 other upstream 1238124 15205951 ~ 15264945 (-)

Expression


Co-expression Network