fbxw8 (fbxw8,LOC107667234,LOC107599639,LOC107566479)


Basic Information

Item Value
gene id fbxw8
gene name fbxw8,LOC107667234,LOC107599639,LOC107566479
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 1271898 ~ 1287998 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043239925.1
ATACTATGTTCCAGCCGAGGCCGTTTCGAGGTCGGATCGCTGTTTGTTTTGATGGCAGCAGCCGGGGTCCGCAAGACTTTTGCGTTTGACTATAACgtgtgtaaaaatatgaatgaaaacgCAACGTGATTAAATGGTGATGGAAGAAGACGAGCTTTCGGCCTTCCGAGAGCAATGGAAACAAGAGTTGCAGAAAAACACCGAGACGTCAAATAAAGACAAGGAGGGATATTTCGGGCACCCCGATAACGACAGCTCATCTCTTTACCAAAGCACGAGCTTTTGGGAGAAACAGAGCAGCTCGTCGAAGCAGACTCAGCCCGCACCGAAGGACCAGCCGCAGTACGTGTCGATCGCCGAGGGTTTGTTGGACGGAAGGAGCGGTCCTCTGCTGGACAGAATCGAGCAGGAGCGGACGCGCAGGAAACGCGCTCCCTGGAGCGAGGCGATCCGCACAGACGCGCCCCCCAGCAAAGTCAACAAGGGCCAGAAACTGCTCGAGCAGTTCCTTCAGGATCTGAATGAGGTGAATGACATCCCATTCTTTGATGTGGAGCTGCCTTATGAACTCGCTCTCAAGATTTTCTACTTCCTGGGCAGAACGGATCTAGGACGATGTGCTCAGGTGTCTAAATCCTGGAAGGTGCTGGCTGAAGATAAGGTCCTGTGGCACAGGTTGTGCTTGGAGGAAGGTTATCACAATGGGGCAAGTATCTCTGACTCCCCCTGCTGGAAGAGCACACTCAGAGACTGCCGCAACACAGAGACTGTGGTGAAGTCTAACTGGAAGAATCGTGTGGGGTCCATTCGCCACCTGCAGTACGAGTTAGGAAAGGTCTTGTGTGATGTCAGTTCCTGTGCTGGTCTTGTAATAGCCGGCTACACCTCTGGTGATGTGCGCCTGTGGGACACGCTTCACTGGGACAAATCCTACCTGCACCCCACACACTCCATCAGAGATGAAACCCCCGCACCTTACGTTAGTCACGTGCGCGTCAATAAGACCGTGGCTACAGCCGCTTATGAGAACGGCTGTGTAGACGTGTGGAGCACTGAAACCGGTCTCGAACCTATTCATCAGCACCAGCACCTCCAGAGAGTTCACGCTCTGGATCTAAGTCCCGACAGTCCGGCTGTGGCGTCTGCATCAGGACCGGATGTGAGGGTGGACGCCCCGGATGAGCAGGGCTACTGGAGATCACAGTGTCTGGTTCACTTACCAAAGCCCGTAGATGGGGTGTTGGTGGTACCAGGGAGGCGGGACTTCTCTTTGGTGGCGGCATGGGCAGATGAGAGTGTTTACCTGCTGGACTCGAGAGCGAATGAAGAGCAGGAACTAAGAGTCGTCCACTCTGTATACGGCCATCCAGTGACGTGTGTGGATGTGTCACCCAGCAGAGCCGCTCTGGGGATCAAGAGCTGCGGATGGGGCATGAACGACGGGGGAAACAAGATTCAGGTGTACAGCCTGGAGACCAGCCAGTGCGAGCTGACCGTGGGGAACTCGGCGGGAGACTTCACCTACGTCAACCTGAGAGACAGCCACCCTCACCTGCTGGTGTGTGGGAACAAAGACAGGCGAGTGAGAGTATTTGACTTGCGTACGGGCTCGTCAGTGGTCTCTTTATACGCCCATCACATGGGCGTGACCACCGTCCAGGCAGATGATTGGAAGATCGTGAGCGGCGGTGGCGAGGGATTGGTCAGTGTGTGGGAGATGAGGATAGGAGCCAAACTCTGGGAAATGCACAACAGacaCCCGGTTCGTCACATACGGTTCAACGCCAGCACCCTGGTGACGGCCAACGTCCCCGATGAGAAGAGCCCTCGCGGGGCTTGTATCACAGACGATGACCTCACCGCTCACCGCagATACAGAGGTCTGATCTGTCACTATGACTTCTCGATGGACTCGTCTGCTCCGGATCACGTTCTGCCCATCTGCAGGTCCAACTACACAGAGTCCTCTGGATACAACTATAACATTGGCTTGGCGATGCCGTATGACATACTGAATGGCCCTTATGTTGGCATCTGATGCTCTGTTCTTTTAGGAACAGTTGAACTGGAAAGATTGGCATtggatttgctttttttaaggtGATCTGCGTCATATTATCAACAGTTTCAGAATCGTGCGTTTGGATGACCCCGTTAAAATGTATAGGTTATGTGGACTAGCACTGTGTGCGTACTATTGAGCGTAGAatcattttctgtcttttcatattttaatatacgatattataatattaaatcacaGCGTGAGAAGGAATACAAGTGATACAAAATGA
>XM_043239926.1
AATACTATGTTCCAGCCGAGGCCGTTTCGAGGTCGGATCGCTGTTTGTTTTGATGGCAGCAGCCGGGGTCCGCAAGACTTTTGCGTTTGACTATAACgtgtgtaaaaatatgaatgaaaacgCAACGTGATTAAATGGTGATGGAAGAAGACGAGCTTTCGGCCTTCCGAGAGCAATGGAAACAAGAGTTGCAGAAAAACACCGAGACGTCAAATAAAGACAAGGAGGGATATTTCGGGCACCCCGATAACGACAGCTCATCTCTTTACCAAAGCACGAGCTTTTGGGAGAAACAGAGCAGCTCGTCGAAGCAGACTCAGCCCGCACCGAAGGACCAGCCGCAGTACGTGTCGATCGCCGAGGGTTTGTTGGACGGAAGGAGCGGTCCTCTGCTGGACAGAATCGAGCAGGAGCGGACGCGCAGGAAACGCGCTCCCTGGAGCGAGGCGATCCGCACAGACGCGCCCCCCAGCAAAGTCAACAAGGGCCAGAAACTGCTCGAGCAGTTCCTTCAGGATCTGCTGCCTTATGAACTCGCTCTCAAGATTTTCTACTTCCTGGGCAGAACGGATCTAGGACGATGTGCTCAGGTGTCTAAATCCTGGAAGGTGCTGGCTGAAGATAAGGTCCTGTGGCACAGGTTGTGCTTGGAGGAAGGTTATCACAATGGGGCAAGTATCTCTGACTCCCCCTGCTGGAAGAGCACACTCAGAGACTGCCGCAACACAGAGACTGTGGTGAAGTCTAACTGGAAGAATCGTGTGGGGTCCATTCGCCACCTGCAGTACGAGTTAGGAAAGGTCTTGTGTGATGTCAGTTCCTGTGCTGGTCTTGTAATAGCCGGCTACACCTCTGGTGATGTGCGCCTGTGGGACACGCTTCACTGGGACAAATCCTACCTGCACCCCACACACTCCATCAGAGATGAAACCCCCGCACCTTACGTTAGTCACGTGCGCGTCAATAAGACCGTGGCTACAGCCGCTTATGAGAACGGCTGTGTAGACGTGTGGAGCACTGAAACCGGTCTCGAACCTATTCATCAGCACCAGCACCTCCAGAGAGTTCACGCTCTGGATCTAAGTCCCGACAGTCCGGCTGTGGCGTCTGCATCAGGACCGGATGTGAGGGTGGACGCCCCGGATGAGCAGGGCTACTGGAGATCACAGTGTCTGGTTCACTTACCAAAGCCCGTAGATGGGGTGTTGGTGGTACCAGGGAGGCGGGACTTCTCTTTGGTGGCGGCATGGGCAGATGAGAGTGTTTACCTGCTGGACTCGAGAGCGAATGAAGAGCAGGAACTAAGAGTCGTCCACTCTGTATACGGCCATCCAGTGACGTGTGTGGATGTGTCACCCAGCAGAGCCGCTCTGGGGATCAAGAGCTGCGGATGGGGCATGAACGACGGGGGAAACAAGATTCAGGTGTACAGCCTGGAGACCAGCCAGTGCGAGCTGACCGTGGGGAACTCGGCGGGAGACTTCACCTACGTCAACCTGAGAGACAGCCACCCTCACCTGCTGGTGTGTGGGAACAAAGACAGGCGAGTGAGAGTATTTGACTTGCGTACGGGCTCGTCAGTGGTCTCTTTATACGCCCATCACATGGGCGTGACCACCGTCCAGGCAGATGATTGGAAGATCGTGAGCGGCGGTGGCGAGGGATTGGTCAGTGTGTGGGAGATGAGGATAGGAGCCAAACTCTGGGAAATGCACAACAGacaCCCGGTTCGTCACATACGGTTCAACGCCAGCACCCTGGTGACGGCCAACGTCCCCGATGAGAAGAGCCCTCGCGGGGCTTGTATCACAGACGATGACCTCACCGCTCACCGCagATACAGAGGTCTGATCTGTCACTATGACTTCTCGATGGACTCGTCTGCTCCGGATCACGTTCTGCCCATCTGCAGGTCCAACTACACAGAGTCCTCTGGATACAACTATAACATTGGCTTGGCGATGCCGTATGACATACTGAATGGCCCTTATGTTGGCATCTGATGCTCTGTTCTTTTAGGAACAGTTGAACTGGAAAGATTGGCATtggatttgctttttttaaggtGATCTGCGTCATATTATCAACAGTTTCAGAATCGTGCGTTTGGATGACCCCGTTAAAATGTATAGGTTATGTGGACTAGCACTGTGTGCGTACTATTGAGCGTAGAatcattttctgtcttttcatattttaatatacgatattataatattaaatcacaGCGTGAGAAGGAATACAAGTGATACAAAATGA

Function

symbol description
fbxw8 Predicted to be part of preribosome, large subunit precursor. Orthologous to human FBXW8 (F-box and WD repeat domain containing 8).

NR:

description
PREDICTED: F-box/WD repeat-containing protein 8-like

GO: NA

KEGG:

id description
K10264 FBXW8; F-box and WD-40 domain protein 8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043239925.1 True 2294 mRNA 0.52 11 1271898 1287997
XM_043239926.1 False 2259 mRNA 0.53 11 1271898 1287998

Neighbor

gene id symbol gene type direction distance location
nf2a nf2,nf2a,LOC107726729,LOC107599150,LOC108431713 coding downstream 15484 1224554 ~ 1256414 (-)
LOC122344672 LOC107599169,LOC100329495,LOC107704423,LOC107750761,LOC107667614,LOC108443917,LOC102231850,LOC103134964,LOC102295583 coding downstream 96624 1145529 ~ 1175274 (-)
prodhb prodhb,LOC107730849,LOC107704395,LOC103359847,LOC107566477 coding downstream 196121 1053144 ~ 1075777 (-)
rtn4r rtn4r,LOC107704387,LOC107599164,LOC107573425,LOC107728899,LOC107667279 coding downstream 303145 898109 ~ 968753 (-)
chek2 chek2,LOC107653214,LOC107667648,LOC107567453,LOC107550275 coding downstream 613705 650073 ~ 658193 (-)
rnft2 rnft2,LOC107599619,LOC107704451,LOC107667191 coding upstream 3833 1291831 ~ 1307537 (-)
nipsnap1 nipsnap1,LOC107599167,LOC107653245,LOC107726724,LOC107599621,LOC107667606,LOC107755818 coding upstream 49165 1337163 ~ 1342053 (-)
nos1 nos1,LOC107599638,LOC107726721,LOC107668720 coding upstream 67361 1355359 ~ 1403124 (-)
ksr2 ksr2,LOC107599618 coding upstream 136406 1424404 ~ 1494687 (-)
wsb2 wsb2,LOC107704505,LOC107716543,LOC107668737,LOC107599617 coding upstream 213469 1501467 ~ 1506232 (-)
G32292 NA non-coding downstream 219719 1051867 ~ 1052179 (-)
G32275 NA non-coding downstream 392756 877910 ~ 879142 (-)
LOC122344906 LOC107676118 non-coding downstream 449069 820190 ~ 822829 (-)
G32245 NA non-coding downstream 553488 718137 ~ 718410 (-)
G32239 NA non-coding downstream 567294 704234 ~ 704604 (-)
G32409 NA non-coding upstream 1280 1289278 ~ 1291763 (-)
G32440 NA non-coding upstream 225047 1513045 ~ 1513312 (-)
G32463 LOC107599159 non-coding upstream 249400 1537398 ~ 1539368 (-)
G32462 NA non-coding upstream 253228 1541226 ~ 1567149 (-)
G32486 pes,LOC107704970,LOC107741508 non-coding upstream 318427 1606425 ~ 1607747 (-)
wdr31 wdr31,si:ch73-266o15.4,LOC107653158,LOC107667323,LOC107751417 other downstream 640772 622514 ~ 631126 (-)
ddr2l ddr2l,LOC107704361,LOC107725118,LOC107550294,LOC107723312,LOC107667359,LOC108444179 other downstream 688803 556654 ~ 583095 (-)
kcnv2b atp5ib,atp5i,atp5ia,kcnv2b,LOC107703581,LOC107725101,LOC107704252,LOC107594594,LOC107723293 other downstream 884020 382052 ~ 387878 (-)
rictora rictora,LOC107704198,LOC107658248,LOC107567655,LOC107750288,LOC107594576,LOC107725140 other downstream 1010227 239951 ~ 261671 (-)
G32104 LOC107725162,LOC107594575 other downstream 1235550 35777 ~ 36348 (-)
castor1 gatsl3,LOC107755828,LOC107726730,LOC107704487 other upstream 24606 1312604 ~ 1336187 (-)
lrrc74b lrrc74b,LOC107755819,LOC107667596,LOC107599620 other upstream 54608 1342606 ~ 1354414 (-)
ypel1 ypel1,YPEL1,ypelc,ypel2b,LOC103374080,LOC106586007 other upstream 385026 1673024 ~ 1694286 (-)
G32676 NA other upstream 678639 1966637 ~ 1967748 (-)
LOC122344636 pex11a,LOC107556261,LOC107714788,LOC107690406,LOC107691149,LOC107715221,LOC107551461 other upstream 732098 2020096 ~ 2022922 (-)

Expression


Co-expression Network