tesca (tesc,tesca,LOC107726727,LOC107667246,LOC107750755,LOC107566489)


Basic Information

Item Value
gene id tesca
gene name tesc,tesca,LOC107726727,LOC107667246,LOC107750755,LOC107566489
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 1266077 ~ 1271257 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043239927.1
TCAAAGTCTGAAGACGCGTCGTGAAAAGTTCTGATTATTCTTCACGCGACTCTCTTTCTGAGCTCTTCCGGACGTCAACATGGGAGCTTCTCAGTCTGGACGCGCGCACACGTTCCGAGATCTGGCTGATAAAACTGGCTTTTCCATAGAGCAGATAAATAACCTCCATAACAGATTTACGTACCTGACTCAAGACGAAGACACTTTAAGACGTGAACACCTTGAGAATATTAGCGATTTGGCCCTCAACCCAATCCGAAGACAGATCATTGAGGCTTTCTTTGATAAAAGGAACTTAGGTGAAAAAGAGAAGGGCTCTCTTCAGGAGATCGGTTTTCAGGAATTCGTTACGGTCCTGTCCTTCTTCAGACCGCCCAAACCACGCATAGCGGACGAAGAGATGAGAAACATCAAGAAGGAGAAACTGCGCTTTCTATTCAACATGCACGACACCGACAACGATGGCGTCATCACACTGGACGAATACAGACGTGTGGTGGAGGAGCTGCTGTCCAGCTACGAAACCATAGGAGCGGAAACCGCCAAAGCCATTTCAGACGCTGCGATGCTGGAGGTGGCGAGCGTCACAGTGGGTCAGATGggtCCCGATGAATTTTATGAAGGAATCACCTTTGAACAGTTCACGCAGATACTGAGAAATTTAGAGATCGAGACCAAGATGAATATTCACTTCTGGAACCTGGACACCAGGACAGTGCAGTGTGGGAAATGAGAGTCGCTTTGGCTTCGGCGCTTTACTTTTCAGGCTTTTTAGACCTAAACATGTTCGAATTTGTCTCAAGTGTTGCGAGTTGATTTCTTCTGGAGATATGTAGGTATCCAGATTAAGAAATGGAGGCAGGGAACATGAGTCAGGAGCaaagttatattataaatatttataaaagctaTTTCTGTGGCTTCGTATGTTCACCCATTTTTAATCGTAAGCACTTTCAAATGCTGTGTATATTGGATTTTGGTAAACGTGATCATAAATTTCCCATCTGAGCAAAGTGCTCATTTTATAATGGAggaagtctttaaaaaaatcaacaaacgAGTGCTGAAACACTCCACACCCAAAGTTAATGTATCCACAAATCTTATCGTTCAACTCAAAAACAGCAGGGAGTGATTGTTTTGTGGCCCTTGTGCATTTACTctcttattaaaagaatatttaatcCATCTGGCTTCCTTCCACCAAAGTTATATAT

Function

symbol description
tesca Predicted to enable calcium ion binding activity. Orthologous to human TESC (tescalcin).
tesc Enables calcium ion binding activity. Involved in several processes, including cellular response to retinoic acid; positive regulation of macromolecule metabolic process; and positive regulation of myeloid cell differentiation. Located in several cellular components, including cytosol; lamellipodium; and nucleoplasm.

NR:

description
PREDICTED: calcineurin B homologous protein 3

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043239927.1 True 1220 mRNA 0.43 8 1266077 1271257

Neighbor

gene id symbol gene type direction distance location
fbxo21 fbxo21,LOC107726726,LOC107750754 coding upstream 1133 1257072 ~ 1264944 (+)
zgc:112294 zgc:112294,LOC107750763,LOC107667255,LOC107566480,LOC107599152 coding upstream 146442 1116139 ~ 1119635 (+)
scarf2 scarf2,LOC107704405,LOC107730837,LOC107566488,LOC107750756,LOC107667270,LOC107599162 coding upstream 164594 1076462 ~ 1101483 (+)
hscb LOC107704372,LOC107751426,LOC107723301,LOC107667639,LOC107550281,LOC107567452 coding upstream 600206 661601 ~ 665871 (+)
LOC122344993 LOC107723300,LOC107667312,LOC107550274 coding upstream 619446 644255 ~ 646631 (+)
spring1 zgc:110063,LOC107667499,LOC107755806,LOC107599146,LOC107704950 coding downstream 36306 1307563 ~ 1310993 (+)
rfc5 rfc5,LOC107716544,LOC107668751,LOC107704514 coding downstream 223671 1494928 ~ 1501851 (+)
si:dkey-98f17.5 si:dkey-98f17.5,LOC107755832,LOC107599615,LOC107668759,LOC107704964,LOC108431725,LOC108255717,LOC107599159,LOC106580116 coding downstream 259504 1530761 ~ 1542384 (+)
pole pole,LOC107704563,LOC107668756 coding downstream 308666 1579923 ~ 1597728 (+)
pes pes1,pes,LOC107704970 coding downstream 332556 1603813 ~ 1612548 (+)
G32281 NA non-coding upstream 215463 1050389 ~ 1050614 (+)
G32280 NA non-coding upstream 215725 1050108 ~ 1050352 (+)
G32237 NA non-coding upstream 561889 703765 ~ 704188 (+)
G32234 NA non-coding upstream 565736 700105 ~ 700341 (+)
LOC122345815 NA non-coding upstream 576041 679630 ~ 690036 (+)
LOC122346206 NA non-coding downstream 18043 1289300 ~ 1293600 (+)
G32344 NA non-coding downstream 27994 1299251 ~ 1301855 (+)
G32351 NA non-coding downstream 66866 1338123 ~ 1341194 (+)
G32361 lrrc74b,LOC107599620,LOC107755819,LOC107667596,LOC107599161 non-coding downstream 71271 1342528 ~ 1345039 (+)
G32390 NA non-coding downstream 140466 1411723 ~ 1418486 (+)
selenoe fep15,LOC107667262,LOC107566481,LOC107750764,LOC108443918,LOC101066385,LOC105931211,LOC100703742 other upstream 150672 1112264 ~ 1115405 (+)
G32277 NA other upstream 208924 1055193 ~ 1057153 (+)
tal2 tal2,LOC107594599,LOC107725114,LOC107723303,LOC107667406 other upstream 814712 450168 ~ 451365 (+)
LOC122346012 cunh9orf84,LOC107704297 other upstream 818591 432779 ~ 447486 (+)
susd1 susd1,LOC107594557,LOC107704917,LOC107572260,LOC107667560 other upstream 834612 419242 ~ 431465 (+)
ccl19a.2 ccl19a.2,LOC107704660,LOC107755825,LOC107599642,LOC107668736,LOC107599131,LOC107741495 other downstream 520571 1791828 ~ 1793266 (+)
G32611 prrc2b,LOC107704672 other downstream 551397 1822654 ~ 1826114 (+)
G32620 prrc2b,LOC107704672,LOC107562325 other downstream 563891 1835148 ~ 1843013 (+)
LOC122346050 nutf2,LOC107726276,LOC107692933,LOC107733565 other downstream 629370 1900627 ~ 1905499 (+)
LOC122345711 LOC107556260,LOC107714787,LOC107691117,LOC107551460,LOC107715220,LOC107690391,LOC565819 other downstream 738960 2010217 ~ 2019150 (+)

Expression


Co-expression Network