ppil2 (ppil2)


Basic Information

Item Value
gene id ppil2
gene name ppil2
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 1623097 ~ 1652416 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043239928.1
CTCAACGCTGACCGGAAGTGTGTTTTAAACAGTCGGAGTATCTGTGTTGGTTTGTTAGGCTTTTATAAACCTTTATTCTTTTGTTTGCTACATCCTCTTGGTCCACAAAAATGGGGAAAAGACAGCATCAAAAAGATAAGATGTACATCACATGTACAGAATACACTCAGTTTTATGGAGGGAAGAAAACAGAAATCCCGCAAGCCAATTTCAGACGTCTGCCCTTTGATCACTGCAGTTTGTCTCTTCAGCCCTTTGAGTATCCCATGTGCACGGTGGAAGGCGTTGTTTTTGATCTAATGAGCATAGTGCCATGGATTAAGAAGTATGGAACCAATCCCATAACTGGAGAGaAACTTGAGGCTAAATCCCTCATCAAGCTTAACTTCAGCAAAAACAATGAAGGGAAATACCACTGTCCTGTGCTTTACACAGTGTTCACAAACAACTCCCACATTGTTGCCAACAAAGTCACAGGAAATGTTTTCTCTCATGAGgcAGTGGAACAGCTCAACATCAAGACAAAGACTTATAAAGACCTGTTGACAGATGAAGCGTTCACTCGCCAGGATCTCATCACACTACAGGATCCCACAAATCTGGATAAATTCAATGTCTCCAACTTCTTCCATGTGAAAAACAATATGAAACTCCTCGATCCTGATGAGGAGAAAGCCAAGCAGGACCCATCATACCATCTGAAAAGCACAAACCTGGAGACACGAGAAACGCTAGCAGAGCTCTACAGGGACTATAAAGGAGATGAGCTGTTGGCCTCCACTATGAAAGAGCcagaaaccaaaaaaacagaCAAGCTCAATGCCGCTCACTATTCTACTGGAAGAGTATCTGCCTCCTTCACATCTACAGCTATGGCTCCGGCCACCACCCATGAAGCAGATGCTATTTCCGACGATGCCGTTCGATACCAGTATGTTAAGAAGAAAGGCTATGTCCGCCTGCACACAAACAAAGGAGACGTGAATGTGGAGTTGCACTGTGATAAGGTCCCTAAGGCTGGAGAAAACTTTATTAAACTGTGTAAGAAAGGATACTATGACGGCACAGTATTCCACCGCTCTATTAGAAATTTCATGattcaaGGAGGAGACCCTACAGGGACTGGTACAGGAGGAGAGTCTTACTGGGGGAAGCCGTTCAAGGACGAGTTCAGGCCCAATCTGTCTCACACGGGTCGTGGTATTCTGAGCATGGCTAACTCGGGACCCAACACAAATAAATCCCAGTTCTTCATAACATTTCGTTCATGCACATACCTGGACAGGAAACACACGGTGTTTGGAAGAGTGGTTGGTGGTTTAGAGACCCTCACAGCGATGGAGAATGTTGAAAGTGATCCGAAGACAGACAAACCCAAGTCTGAGATCAAACTGCTGAGCGCTACAGTATTTGTGGACCCGTATGAGGAAGCCGATGCACAGATTGCAGCCGAGCGAGAGAAAGAAGCACAGAAACAGGAAGAAGAGAGAGCGCAAACCTCTGCTTCACTCATTAAGGCAAAAACAGAGGACAAGCCTAAAACCTTTAGACCAGGAGTGGGCAAATACATCAACATGACTGCCAcGAAACATTCCCACCCAGATGGTGACAAACCCTCCACCAGTGAAGCTCCTGCCAAGAAACCCAAAGGCAGAACAGGTTTCGGAGACTTCAGTTCCTGGTAGAAGCACGGCGCGTCCCTCCTCACTCTACTGATTGTGGGTAAATTGAGATATTGGACTGATCATACTCAGTTCAGACCTCTTGGTTTTTCCCTTTTATGGATCTGgttttgatttgtgtttttagatCATAATGTGGCAGTGAAGTCgagtctttttttatattgaggcctgtaaataatcagttatttttttgcgtatgaaatgatttaatgtttgcatcaattaatgcattttgcGAAAAGTTTGGCTTGTTCATACTGCagtgcttttatttctgttaattgtaGGGTTATGGAAGCCCGTAGAAACCTCACAATTCTCACTTTGTTTCTGgcaattttgtttaaatgacctttttttgtgtgtgccacagaatacaaaataaaacattttatatttctca

Function

symbol description
ppil2 Predicted to enable peptidyl-prolyl cis-trans isomerase activity and ubiquitin-ubiquitin ligase activity. Predicted to be involved in protein peptidyl-prolyl isomerization and protein polyubiquitination. Predicted to act upstream of or within protein folding and protein ubiquitination. Predicted to be active in nucleus. Orthologous to human PPIL2 (peptidylprolyl isomerase like 2).

NR:

description
peptidyl-prolyl cis-trans isomerase-like 2

GO:

id name namespace
GO:0000413 protein peptidyl-prolyl isomerization biological_process
GO:0006457 protein folding biological_process
GO:0016567 protein ubiquitination biological_process
GO:0000151 ubiquitin ligase complex cellular_component
GO:0004842 ubiquitin-protein transferase activity molecular_function
GO:0003755 peptidyl-prolyl cis-trans isomerase activity molecular_function

KEGG:

id description
K10598 PPIL2, CYC4, CHP60; peptidyl-prolyl cis-trans isomerase-like 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043239928.1 True 2088 mRNA 0.43 20 1623097 1652416

Neighbor

gene id symbol gene type direction distance location
gal3st1a gal3st1,gal3st1a,LOC107741514,LOC107653284,LOC107755837,LOC107668734 coding upstream 770 1616062 ~ 1622327 (+)
pes pes1,pes,LOC107704970 coding upstream 10549 1603813 ~ 1612548 (+)
pole pole,LOC107704563,LOC107668756 coding upstream 25369 1579923 ~ 1597728 (+)
si:dkey-98f17.5 si:dkey-98f17.5,LOC107755832,LOC107599615,LOC107668759,LOC107704964,LOC108431725,LOC108255717,LOC107599159,LOC106580116 coding upstream 80713 1530761 ~ 1542384 (+)
rfc5 rfc5,LOC107716544,LOC107668751,LOC107704514 coding upstream 121246 1494928 ~ 1501851 (+)
LOC122344671 LOC107755842,LOC107599645,LOC107599132 coding downstream 90899 1743315 ~ 1745171 (+)
ydjc LOC107741491,LOC107704612,LOC107599608,LOC107755843,LOC107668745,LOC107599128 coding downstream 121549 1773965 ~ 1779426 (+)
ccl19a.1 LOC107704652,LOC107741512 coding downstream 142118 1794534 ~ 1796438 (+)
tctn2 LOC107704714,LOC107741513,LOC107599155 coding downstream 144418 1796834 ~ 1806041 (+)
sec14l8 sec14l8,LOC107741494,LOC107599607,LOC107668747,LOC107704732,LOC107755846,LOC107599126,LOC108431737,LOC108255515 coding downstream 154534 1806950 ~ 1820557 (+)
G32443 NA non-coding upstream 46827 1544752 ~ 1576270 (+)
G32439 NA non-coding upstream 109548 1513050 ~ 1513549 (+)
G32406 NA non-coding upstream 114990 1497804 ~ 1508107 (+)
G32381 NA non-coding upstream 198000 1422607 ~ 1425097 (+)
G32390 NA non-coding upstream 204611 1411723 ~ 1418486 (+)
G32499 NA non-coding downstream 1017 1653433 ~ 1653899 (+)
G32504 NA non-coding downstream 20613 1673029 ~ 1674356 (+)
LOC122345819 NA non-coding downstream 37693 1690109 ~ 1697674 (+)
G32513 mapk1,LOC107386038 non-coding downstream 53558 1705974 ~ 1706887 (+)
G32538 NA non-coding downstream 107578 1759994 ~ 1760230 (+)
selenoe fep15,LOC107667262,LOC107566481,LOC107750764,LOC108443918,LOC101066385,LOC105931211,LOC100703742 other upstream 507692 1112264 ~ 1115405 (+)
G32277 NA other upstream 565944 1055193 ~ 1057153 (+)
tal2 tal2,LOC107594599,LOC107725114,LOC107723303,LOC107667406 other upstream 1171732 450168 ~ 451365 (+)
LOC122346012 cunh9orf84,LOC107704297 other upstream 1175611 432779 ~ 447486 (+)
susd1 susd1,LOC107594557,LOC107704917,LOC107572260,LOC107667560 other upstream 1191632 419242 ~ 431465 (+)
ccl19a.2 ccl19a.2,LOC107704660,LOC107755825,LOC107599642,LOC107668736,LOC107599131,LOC107741495 other downstream 139412 1791828 ~ 1793266 (+)
G32611 prrc2b,LOC107704672 other downstream 170238 1822654 ~ 1826114 (+)
G32620 prrc2b,LOC107704672,LOC107562325 other downstream 182732 1835148 ~ 1843013 (+)
LOC122346050 nutf2,LOC107726276,LOC107692933,LOC107733565 other downstream 248211 1900627 ~ 1905499 (+)
LOC122345711 LOC107556260,LOC107714787,LOC107691117,LOC107551460,LOC107715220,LOC107690391,LOC565819 other downstream 357801 2010217 ~ 2019150 (+)

Expression


Co-expression Network