pld2 (pld2,LOC107746406,LOC107663402,LOC107734122,LOC107661209,LOC107596108)


Basic Information

Item Value
gene id pld2
gene name pld2,LOC107746406,LOC107663402,LOC107734122,LOC107661209,LOC107596108
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 14191695 ~ 14212317 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043239938.1
GTGGGTCTCATCAGGGTGTTGTTTGAACTGCACAGATGCTCGTTTATCGTCTGTGAGGATTCTGTGATAAGACGCTGCTTATCAATGCTGCAGCATCCCGAGTCTCATCTACGCGTGTTACGGTGGACACGTGGGACGTTTACGCCAGGCACAGATGCAGCAAACCTACGCCTCGGGAGTTGCGATGGGGGATAAGTTATCCAGAAGTTTGAGTCCAACTGGGAAATAACAATCGACGGAACTACAAGGTGTCAGACGAGGATCAATCGCGACAGTTTCCTTGGTGGTGAGTCGCGGTCCAGTAGCCTTATGGCTAGTTCTGAGACGGATGCAGCAAAAAGGTGGCAGAAATGTGTGGACACTGTGCTGTGCAACCTTACTAAGGATCAGTTGAAATCTATTGAAAGCAACAGCGAGGAACGGGACTTTTTTGTGGTACATCACCTGGCAGACCTGAAAGAAGGTTGCATCTCTCCTCTCATTCATGGCACACCTATCACCTGTAAAGTGGAAAACACAGAGCGGTACACCACCCGCTCTAAGGTACATGTATGCACTCTATACACTGTCCGTCTGACACATGGCGAGTTCACATGGATGGTAAAAAGAAAGTACAAGCACTTCCAGGAGCTCCACAGAGACCTgtacaaacacaaaatgatgCTGCAGTTCTTGCCTCTGGGGAGATTTGCCATTCAGAGACAACAGATGGCAAGTTTGACAGAGGAAATGCCAACTCTACATGGAACCGATAGAATCAGGAGAACGTCTAGCAAACCGaaatatCTGGAGGAATATTTAAACAACTTGCTAGAAAACACTTTCTACAAGAACTATCATGGGATGTTGGACTTCCTGGCAATTAGTCCACTGTCCTTCATCAGAGACCTTGGACCCAAAGGCCTtgaaggTTATATTCTTAAACGATCCGGGGGTCACCGGATCCAGGGGCTCAACTGCATAGGTCACCATCAAGTCTGCTTCCGCTGGTCTCGTCGTTGGCTTGTGGTGAAGGATTCGTTTCTTCTCTACATGTCCAGAGATACTGGTGTTTTGTCGTTTGTGCTGCTGTTCGACCCTGAGCTGAAGGTGTTGGTTGGACGTGTTTACACTGATACCAAGCATGGCGTCTGCATCGAGAACTTcagcaggaAGCTGGTGATTAAGTGCAGTAGCTACAGGCAGGCCCAGTGGTGGAGTCATGAGATTCGGAGTCTCGCTGAGCGCAGTGATTTTCTCCAGACGCATCGCTTTGAAGGCTTTGCCCCCCCCAGACCGGACACTCTTACAAAGtgGTATGTCAATGGAAATGGCTATTTCTCAGACGTGGCTGATGCCCTGGAACAAGCCAAGGAGGAGATCTTCATCACTGATTGGTGGCTCAGTCCAGAGGTTTTCCTTAAACGTCCAGCTACAGGAATGTACTGGCGTTTGGACAAGATTCTCAAACGCAAAGCAGAACAGGGcgtgaaggtgtgtgtgttgttgtatAAGGAGGTGGAACTGGCTCTGGGTATCAGCAGTGGCTACAGCAAGAGAACACTGATGAACCTTCACCCCAATATTAAGGTTATGCGTCACCCTGATCATGTTGCCTCAGTTGTGTTTCTCTGGGCTCATCATGAGAAAATGGTTGCCATCGACCAATCAGTGGCCTTTGTGGGTGGGTTGGATCTGGCGTTTGGGAGGTGGGATGACAGCGACTATAGGCTGAGTGATTTGACACCCTCAAAAACAGCCAGTAATGCAGAGGCTGCCCCAGAGTCTGATGCTGTGGATGGCTCTGCAGTTCCTCTGACGGATCTTGTGTCGGAGTGTGGTGATGAAGTGGATCTGAGCTGTAATGCCCTCTTGTGGCTGGGAAAAGATTATAGCAACTTTATCAAGAGGGACTGGACACAGCTGGACCAGCCCTTTCAAGaCAATGTTGACAGGACTCAGGTGCCCCGCATCCCTTGGCGAGACCTGGGTGCGGTGCATCATGGGAAAGCAGCCAGAGATCTTGCACGACACTTCATCCAGCGCTGGAACTTCACTAAGATCTTTAAGAACAAGTACAAGGATGACTTTTACCCATACCTACTGCCGAAATCTCACTGCACTGCAGATAAACTGCCATTCACCATCCCTGGTGCCACAAAAGCCTCTGTACAGGTTCTTCGTTCTGTTGATCGCTGGTCTTCTGGCACATGTGAACATTCCATCCTTAATGCCTATATACATGTTATTGAGAACAGCGAGCATTACGTTTATCTAGAGaaccaGTTCTTCATCAGCTGCTCAGATCAGAAGTACGTATTCAATACCATTGGTGATGCTATTGTCAAACGGATCCTACGGGCTCACAGTGAGGGGAAGAAGTACAGGGTGTTTGTCGTGATTCCTCTGCTGCCTGGCTTTGAGGGTGACATCAGTCAGGGAGGAGGAAATGCCATTCAGGCTATCCTGCACTTCACCTACCGAACGATCAATCGAGGAGAACACTCCATTCTCTCAAGATTAAAGGAGCACATGCAGGATGAATGGACACGGTACATTTCTCTTTGTGGTCTGCGGACACACTCTGAGCTTGGCCAGTCCCCTGTAACAGAGCTCATCTACGTCCATAGCAAAGCCCTCATTGCTGACGACCGTTGCTACATCATAGGGTCAGCCAACATCAATGACAGGAGCATGCTGGGAAGTCGTGACAGTGAGCTAGCAGTGCTGGTAGAGGATGAGGAAAGAGTTCCCTCAGTCATGAACGGAGAGGAGTACCAGGCTGGACCACTAGCACTTGCTTTACGGAAAGAGTGCTTCAGCGTACTTCTCGGAGCAACATCTGATCCGAATCTGAACATTGATGATCCAGTCTGTGATCATTTCTTCAATGACGTTTGGAACAAAATCGCGCAAACAAATGCCATCATCTATGAGAAGGTCTTCCGATGTCTTCCACTGGACTCCATCCGCAACTTGCGTGAGCTGCAAGAACATGTAAATTCTCAAAACCTCAGTCTTACCGACCCGGAGAAAGCCAAAGAAGAAATACAGGCCATCCAGGGCATCCTGGTCCATTTCCCGCTGCACTTCCTGTGCGAGGAGTACCTTCTCCCACCTCTTAAAAGTAAAGAACGAATGGTTCCTATGGAGGTGTGGACCTAGCAAGGAAGACTTTCCAGTGAAGCATGCCAGTGAAACAGAAGATTTCAGAGCTTAAAATATCACACGTCTGCTAACTAAGCTGGAAGCTATGGTGTTTTCTTTCAGCCACACTTTTTGTCCATTTTGGTTTGGACTAAAGTAATGGTAGTAAATGGATGATTAGCTCTAAACACTAACGAAATTAGTGTAGAAacgcaaaaaaaatgttcttgcaTAAGAAGATAAACGTGTTTATACCAGGAGAATCACATAATGTAGTTGCtaattatatgaaaatacaatgaaattaaaagaaaaaattccaAATGGCCATTACGACCACGATTGGCACGATCTATGTAGGTAAAATGGCAGAGAATTAAAAGTGCTGCATATCAAATGAGGAAAGAAGAGCGAATCAGgcgaaaaagagagagagagtattttTGATGACCGAGGAACAGAACGTACATTTAttgttgtgaatgtgtgtgggTGGATGGTGCTGCTTTACCtccttttccctctctctttatttctttcttgtgtGCACTACACCTCTCAATGCAGTGGCAGCAAATCTGTCAGAACATTTGTGGTTGTTATGGTGACGGGTATAAAGAGCTGACTTGGTCTTGgctgctgagagagagagagagagatagagagaacgAAAGAAAGAGGCAGGAAGAGATTGAGAAGAAGCAGGAAAAAATAGACGAACCGTAAAAACACGTAtaactgtgtgtgcgtgtcgaGGCGAAGGGTATGCTGGCATACTTGGTCAGAGaaattatgtaatgttttttttttgaaacaggtAGAGGGGGAGTGTTACGGAGCAGGGATCAGGTGGGGCTTCAAACATGGTGAGATATTCAGGGGGAGTCTCAGCTCAACATTTATCACCCCCTCAAATCTCCATGACAACCAGGAGAAAttattgttatgtaataatgtCAGCAGCCCAGAAGATTCCACTTTTGGTTTTTTGGAGGGGGTGTTGACACAAGTAGAGAGTACACTGGAGGCCAAACAAGCAATGCTAATTTTGTCCGTGCCCCACTTCCACGATCACTAATCTGCGTGTGTAATGTTGTAGAATGTTATATAGTTGACATCGTCTGCACTTGAAGAGAATGTTTTAGTGTTTGACCACTGGAGACATGACCGTTATTATACTGTAAACATTCCAATCGCATCAAGCAATCACCTTTATGAAGTAACAGTTCTGAtctttttaaatttctattCCTATTAAGGCATATTAACATATCtgcttttgcacattttatactttatttacataaaattgcttttatttaaaaagcaaaactcaCTTACTAATACTTAAATGAATCTTGGCTAACACTATGTGTTTTCACAACTTTTGGACATCTGCATAGGCCTTTCCTAGGGTAGATGCCAAACTGAATTTTCTTCAGATGAAAATTATGCTGTGAACAGTCTTTACAATGGCATGCactctttcaaaacaaactcactattattatgttttttttgttttacggaggttttgttttaaatattatttttttgtaagctAAACAAATTGCTTGTTAAACAGTACAATCAGTTGAACAAACTACACTGCTTTCCCTCAcagctttgttttcatttctgtcaGAAATTAAATTTGGTGCTACCCTGACTAAGGTTTAtaagtgtgtgcgtgttttttttttctaaatgtacaaGATAATTTTTGGATTGATGACTATAAATATGTATCACAGTTGTTTGTAAACCGGTGAGCAATCAAATTTTTTCCCTCCATCTAACTTCTATCATatggacatttaaataaatgtattaattcacaagt

Function

symbol description
pld2 Predicted to enable N-acylphosphatidylethanolamine-specific phospholipase D activity; phosphatidylinositol binding activity; and phospholipase D activity. Predicted to be involved in cell motility. Predicted to act upstream of or within inositol lipid-mediated signaling; lipid catabolic process; and phosphatidic acid biosynthetic process. Is expressed in yolk syncytial layer. Orthologous to human PLD2 (phospholipase D2).

NR:

description
PREDICTED: phospholipase D2-like

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0035091 phosphatidylinositol binding molecular_function
GO:0003824 catalytic activity molecular_function

KEGG:

id description
K01115 PLD1_2; phospholipase D1/2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043239938.1 True 4969 mRNA 0.44 26 14191695 14212317

Neighbor

gene id symbol gene type direction distance location
mink1 mink1,LOC107746403,LOC107596107 coding downstream 1223 14156523 ~ 14190472 (-)
LOC122345196 LOC107663404,LOC107599202,LOC107746401,LOC107734151,LOC107661205 coding downstream 47904 14140242 ~ 14143791 (-)
slc12a9 LOC107746400,LOC107599203,LOC107663403,LOC107661204,LOC107734138 coding downstream 51644 14130798 ~ 14140051 (-)
gucy2d gc3,LOC107599205,LOC107661246,LOC107734113 coding downstream 79619 14100492 ~ 14112076 (-)
si:ch211-284e13.6 LOC107746420,LOC107663368,LOC107599222,LOC107734114,LOC107596187 coding downstream 91882 14094578 ~ 14099813 (-)
chrne chrne,LOC107663376,LOC107599201,LOC108428951,LOC108260097,LOC106603603 coding upstream 342 14212659 ~ 14220080 (-)
atp1b2b LOC107746408,LOC107599200,LOC107663400,LOC107596104,LOC107661212,LOC107734137 coding upstream 13673 14225990 ~ 14238346 (-)
LOC122344799 nyap1,LOC107746410,LOC107599218,LOC101885998,LOC107596102,LOC107661215,LOC107734142 coding upstream 28022 14240339 ~ 14274137 (-)
cnot6l cnot6l,LOC107752360,LOC107663397,LOC107567468,LOC107746779 coding upstream 121901 14334218 ~ 14346680 (-)
paqr3a paqr3a,paqr3,LOC107661222,LOC107567467,LOC107599192,LOC107663396 coding upstream 281272 14493589 ~ 14500572 (-)
G36385 LOC107596209,LOC107734118,LOC107661259 non-coding downstream 214625 13975352 ~ 13977070 (-)
G36337 NA non-coding downstream 372361 13818248 ~ 13819334 (-)
G36297 NA non-coding downstream 478275 13712680 ~ 13713420 (-)
G36224 LOC107700249,LOC107746377,LOC107548465,LOC107710575,LOC105912484,LOC105027847,LOC106603104,LOC106563440 non-coding downstream 479736 13708100 ~ 13711959 (-)
G36279 NA non-coding downstream 554372 13633670 ~ 13637323 (-)
G36541 NA non-coding upstream 63779 14276096 ~ 14310067 (-)
G36561 NA non-coding upstream 98307 14310624 ~ 14310860 (-)
G36562 NA non-coding upstream 98645 14310962 ~ 14311328 (-)
G36537 NA non-coding upstream 99451 14311768 ~ 14320994 (-)
G36567 NA non-coding upstream 136791 14349108 ~ 14349936 (-)
rnf214 LOC107663407,LOC107746393,LOC107599207,LOC107596114,LOC107734124,LOC107661199,LOC107599223 other downstream 134990 14040982 ~ 14056705 (-)
tmprss13b LOC107746439,LOC107663381,LOC107599230 other downstream 182159 14001934 ~ 14009536 (-)
LOC122345901 NA other downstream 343625 13845403 ~ 13848070 (-)
G36336 NA other downstream 372753 13817742 ~ 13818942 (-)
G36298 NA other downstream 473152 13717124 ~ 13718543 (-)
znhit1 znhit1,LOC107752359,LOC107661214,LOC106567874 other upstream 67357 14279674 ~ 14282620 (-)
LOC122345141 LOC107752369,LOC107661250,LOC107567461 other upstream 79746 14292063 ~ 14302381 (-)
pdzd2 pdzd2,LOC107746802,LOC107681406,LOC107661237 other upstream 993634 15205951 ~ 15264945 (-)
zfr zfr,LOC107746805,LOC107681158,LOC107552600,LOC107602019 other upstream 1081539 15293856 ~ 15308440 (-)
npr3 LOC107681138,LOC107746807,LOC107552598,LOC107602007,LOC107708637,LOC107661273 other upstream 1137699 15350016 ~ 15367413 (-)

Expression


Co-expression Network