zgc:101858 (zgc:101858,LOC107740831,LOC107699707,LOC107552635,LOC103359842)


Basic Information

Item Value
gene id zgc:101858
gene name zgc:101858,LOC107740831,LOC107699707,LOC107552635,LOC103359842
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 20127887 ~ 20130221 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043239939.1
cgCAACAGTAAGTCTGATataaaaatgaagacaaataTACTCTGGCACAAGAAAACAGAACAATGCGAGTAATATTTGTCTTGAGAAAGTAAAGGACTGAACCCTGAAATGCCCTTATCGCACGTGCACGTGACGTAACTGGTTCACTCGCACGTGAGcgaaaggaaaaataaaaggcCACTCAAGAGCTGTGAATATCATTTAAATCGAAATGGCAAGTCCAGACGCGTTCAAAGTTGGCTCTTTAAAGGGCAAAGTGACGCTGATCACGGGCGCCAGCTCGGGGATAGGAGCGGGCGCGGCGGCGCTGTTCTCCAGGCTGGGCGCTCACCTGGCGCTCAATGGACGCGACGTGGACAACCTCGCCAAAGTCGCCAAAGAGTGCGAGGCGCGGGGGGCAGTTAAACCCCTGTTAGTGCCGGGAGACTTGACAGATGAAGACACCGTGAGGAGGACGGTGGAAGAGGTCATCGCTCACTTTGGGAAGCTGGATGTCCTCGTCAACAGTGCAGGAATCCTTGCCATGGGCAGTATAGAGACAACAGACATGGCCCAGTATGACAAGGTCATGTCTGTCAATGTCAGATCGGTGTATCATCTCACTCATCTCTGTGTGCCTCATCTCATCAAAACAAAAGGCTCGATTGTGAATGTGTCCAGCGTGAATGGGCAACGATCATTTCCTGGTGTACTGGCCTACTGCATGTCCAAATCAGCCATCGACCAGTTCACACGCTGCGTTGCTCTTGAGTTGGCATCAAAGCAAGTGCGTGTCAACTCAGTTTGCCCAGGAGTAATTATTACCGAGGTTCACAAGCGTGCGGGACTTGACGAGGACCAGTATGCTCAGTTCCTTGAGAAGTGCAAGGTGACCCATGCTCTCGGCAGACCAGGTGAAGTAGACGAAGTAGCTCATGCTATCGCTTTCCTGGCATCTGATGCGGCAACATTTATAACAGGTGTCAATCTTCCAGTGGACGGAGGTCGACATGCTATGTGTCCACGGTAATGATTCGCTGCCACGATAACGGCTGCCAGAAGCAAAGAAATAAACCAAGTTGGAATCGA

Function

symbol description
zgc:101858 Predicted to enable oxidoreductase activity. Is expressed in several structures, including alar plate midbrain region; eye; immature eye; midbrain; and pectoral fin.

NR:

description
unnamed protein product

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016491 oxidoreductase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043239939.1 True 1068 mRNA 0.51 8 20127887 20130221

Neighbor

gene id symbol gene type direction distance location
ptgs1 ptgs1,LOC107720239,LOC107699776,LOC107672577,LOC107587657,LOC107731054,LOC108255976 coding downstream 18649 20095469 ~ 20109238 (-)
pmpca pmpca,LOC107672556,LOC107699775,LOC107731046 coding downstream 52179 20071282 ~ 20075708 (-)
ptrh1 ptrh1 coding downstream 66690 20058275 ~ 20061197 (-)
cfap157 cfap157,LOC107587652,LOC107672550,LOC107731015 coding downstream 87718 20035492 ~ 20040169 (-)
LOC122345820 LOC107720235,LOC107699702,LOC107587551,LOC107756287,LOC107567124 coding downstream 364779 19759722 ~ 19763108 (-)
ppil3 ppil3 coding upstream 238 20130459 ~ 20131947 (-)
lrrc8ab lrrc8ab,LOC107699779,LOC107552633,LOC107740800,LOC107731052,LOC107587658,LOC107672572,LOC108423682 coding upstream 1963 20132184 ~ 20138436 (-)
olfm1a olfm1a,LOC107699781,LOC107552636,LOC107587661,LOC107672574,LOC108423683 coding upstream 42022 20172243 ~ 20185023 (-)
LOC122345833 wdr5,LOC107740805,LOC107741954,LOC107686885 coding upstream 149293 20279514 ~ 20285219 (-)
LOC122345847 NA coding upstream 168925 20299146 ~ 20300348 (-)
G38019 NA non-coding downstream 171225 19956428 ~ 19956662 (-)
G37928 NA non-coding downstream 424202 19703420 ~ 19703685 (-)
G37926 NA non-coding downstream 425544 19702069 ~ 19702343 (-)
G37877 NA non-coding downstream 617605 19505921 ~ 19510282 (-)
G37801 NA non-coding downstream 841039 19286627 ~ 19286848 (-)
G38147 NA non-coding upstream 25560 20155781 ~ 20160794 (-)
G38156 NA non-coding upstream 146447 20276668 ~ 20279101 (-)
G38158 NA non-coding upstream 154402 20284623 ~ 20286229 (-)
G38161 NA non-coding upstream 167087 20297308 ~ 20677930 (-)
LOC122345854 NA non-coding upstream 528873 20659094 ~ 20659471 (-)
G38140 si:ch211-236k19.4,LOC107552622,LOC107740829,LOC107699705,LOC107731026,LOC107672535,LOC107587659 other downstream 497 20125589 ~ 20127390 (-)
G38058 NA other downstream 72089 20051659 ~ 20055798 (-)
kcnt1b LOC107720246,LOC107699766,LOC107672542 other downstream 192311 19865019 ~ 19935576 (-)
mtx3 cmya5,mtx3,LOC107699728,LOC107703257,LOC107720274,LOC107756304,LOC107555495,LOC107756305,LOC107720223,LOC107703259 other downstream 943909 19175463 ~ 19183978 (-)
LOC122344738 acsl1b,LOC107571490,LOC107678619,LOC107758469,LOC107552354,LOC108274927 other downstream 2777507 17346469 ~ 17350380 (-)
LOC122345844 ppil3 other upstream 264510 20394731 ~ 20396734 (-)
LOC122345723 LOC107665045,LOC107595503,LOC107688632,LOC107731048,LOC107740809,LOC107740824 other upstream 775822 20906043 ~ 20936097 (-)
G38359 NA other upstream 1234017 21364238 ~ 21369048 (-)
G38355 abr,LOC107665039,LOC107595513,LOC107712163 other upstream 1482467 21612688 ~ 21619583 (-)
akap10 akap10,LOC107595480,LOC107587677 other upstream 1678792 21809013 ~ 21826105 (-)

Expression


Co-expression Network