srrm3 (srrm3,LOC107591468,LOC107734356,LOC107562180,LOC107725131,LOC107654313)


Basic Information

Item Value
gene id srrm3
gene name srrm3,LOC107591468,LOC107734356,LOC107562180,LOC107725131,LOC107654313
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 31506479 ~ 31567684 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043239951.1
GCGCCGCGGTGGCTCCTCCCGTCCGCCGGAGGGCGCTGCGTCTTCCCCGGCTCGGCTCCGCTCGTCTCTCGCGCTCCAGCACCGAGCGTTCAGCACCGCGAGCGGAGGACAGCTCCCGAGCCTCCGAGAAAAACACCGCAGACCGCCGCAGAAGCGCTTCAGCCAGCCTCGTCTGCTTCCGCGCGACCCACCGAGCGCCGTGGCCATGTACGACGGGGCGAGGGTTCCCTCCCCTGAGGACGGTGCTAACGGGGTCCCTCTGCAGCCCGAGGCCCCTGCAGACCGTCCCAGAGCCGACGAGCAgcctgaggaggaagagggagTCCCGCCCGAGCCTGTCCTGGTGAAGAAGGCTCACCGCGAGATTCTGGACcatgagaggaagaggagggtgGAGCTGAAGTGCATGGAGCTTCAGGAGATGATGGAGGAACAGGGATATTCCGAAGAAGAAATCCGGCAGAAGGTTGGAACATTTCGGCAGATGCTGATGGAGAAGGAGGGCGTGATAACTCGAGAAGGCTTGCACCCTCGTCCACCGGTTAGGCTGCTTCCTCACGAGGATGAAGATCACATGGGAAATGCCGCGTACATCGATGGATATGAGGAAGACTATGATTGGGATGGAGAATATTACGAGCAAGATTCAGCTGCCTACGATGAATGCAGATCCAAGAGGAAATCCAGCAGTTCACCTTCCCCTCGGCcaaagaagaggaaaaagaagaaggCAAGGAGACACAGTCGAGCTGACAGCCCGTCTCCAACCCGCAGAGACAAGAGGAAGAAAGGCGGAAAGAAACACAAGagagacagGTCTACATCTGGCtcaaggaggaagaggagacaCAGATCTGGGAGccccaaaaacaaacacaaagacaagaacaaacagaaaaagagGTGTTCGGTGGAGTCTCCCAGCAGGAGTTCTCAGCACAGAGGCAGCTGCTGTAGTTCCCGCAGCGGATCCGTCTCCTCCACCGCCAGCGTCTCCAAATCACCCAGCAGATCAAGTGCAAAGTGCAGGAACGACAGGCACAAACAGGAAGGAAGTCACTCCAGCCACAGCCCACCGCCGTCCCCCAGCACTGATCAGCCAATCACGTGGCAGAATGGGAACCACAGCGTCCGTGTACGCAATGGCAAAGATTCAGGAGCCAATCACACGGAGGGGAATAAAGGGATCGATAAGCTTCGCTCTCTGGCTCCGTCTCCCTCGAGCGCGCAGACGCACGCGTCGCCTCATCTAAGAGGTGCTAAACACCACGCCGACCGCCCCAGGAGCCCCGGAGGAGCAGCGGCGCAGACGGCAGAGGACGGCTGCGCAGACGACAGGCCGGCGACGGGCAAAGCGCTCTCAGACGCGGCGGGGAGACGCGGCGGGAGGCCCAGGCTTCGAGAGAAGACGTCGCGCTCGCCGGCCCACAGCACTGACACTGAGCCACACACCAAAACCAAGAATCAGAAGAAAACGAAAGGATCTCATTCGTCGAAGCGGCACCATCGCGGACGCGGCCAGAACCATCACCGGAGCTCCTCGGTGTCTCCGGGTCGACACAAACACACGtccaagaagaagaagagcaagAGCCACGGGACGAGCCGGCAGAGGAGCAGCTCCTTCAGCAGCGGGAGGTCGTCGTCTCGAGGACCCAGCAAGAACAAATCACCGCACGTCCGACAGAACAACTCCAGGGAGAGAGACAGTCCTCATCACTCGGATGCAGAACGAGCTCGGCGCCGCTCACGCAGCTATTCTCCCATCCGTAAGAGACGGAGAGACTCCCCCAGCTTCATGGAGGCTCGCAGGATCACCAGCGCCCGAAAGCGTCCCATCCCGTACTACCGGCCGAGTCCGTCCTCGTCCAGCTCGTCCAGCAGCTACAGCAGCTCCAGCCGCAGCCGCAGTCGCAGTCGCAGCTACTACAGCTACAGCAGCTCCAGCAGCTCCAGCCGGACGGGCCGGAGCCGGAGCCCCAGCCCCGCGCACAGCTACTACAGCCAAAGCAGCTACGACAGCCCCGGCTTCTGAGAGACGCCCGACAGACGTGCTAGCATGCAAAAACCGAACGCAAATGATAAGACGTGTTAAAGGTGAAGAGAGTAATTGCGCTCGCTCGGtacttttgtcttgttttccagtacaaatGTGGAGGAACGTTTTAAAGCGCTCCTGTTATGGGTAAAGAAAGtccatgcaaggtcaaaaaacacttcgttgtcttttaatatgcatttagcGTTATCTTGTTTGGTCAACGATTCTGTGGCAACATGAAAAACTGCTTGGGACTCGACTTCTTcgttttgagagacaataactaaCGTACATTatacggtgcactttcagatttaaaactaaaagatcattttcaaaaatccgtaacggggcactttaaaacaaaatacatcagGGTAACAAAACGgtgcatgaataaaaatgagtttatgcttaaaagcagaaaaaaatatcataaaactaaattgaatttaatgtgGAAGTCGTTATTTTTTTGACCACTAtcttcattttgcttttttttaaataaattttgatttatttattacatttagattacacATTTATACTGGAAAAATCCTGgctgagaatttttttttgccgtttataaatgtatttattattattatttattttttagcgtGTCTGACTCAAACTGGATTCTATTTAATTCATCTGTGACCGTGTGATGCAGAGCTCACCCCCTTCACCTTTAACATAGGCTTTGTTCGCTCAGAAAgcaaaaatcattattaacttgaaaattatttatttctgacgCAAATCCACTCTCTCCGATTTTCTATACTTCCGAAAGcataacaaatgcataaaatctGATTTTTCCAACCTCTCTTTCCGCAGCGactattaaagtaataataatgatgcttATGGCGTTATCGCTGTGGTAGATTATGTAGATGCACCAGATATGATGCATAAAGAGCACTGTCTGAACAAACACTTGAAGTGATCTTGAAGACTGGATTTGAGTGTTCAGTGCAAACTAAAGCATTTTAGGAAGCGAACTGATAAATAACTTTAATGTATTTGACGTTTAAAATCAGCTGTTCATTTCACTCAGTAAAACTGCtgactaaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaca
>XM_043239952.1
GCCGCGCCGCGGTGGCTCCTCCCGTCCGCCGGAGGGCGCTGCGTCTTCCCCGGCTCGGCTCCGCTCGTCTCTCGCGCTCCAGCACCGAGCGTTCAGCACCGCGAGCGGAGGACAGCTCCCGAGCCTCCGAGAAAAACACCGCAGACCGCCGCAGAAGCGCTTCAGCCAGCCTCGTCTGCTTCCGCGCGACCCACCGAGCGCCGTGGCCATGTACGACGGGGCGAGGGTTCCCTCCCCTGAGGACGGTGCTAACGGGGTCCCTCTGCAGCCCGAGGCCCCTGCAGACCGTCCCAGAGCCGACGAGCAgcctgaggaggaagagggagTCCCGCCCGAGCCTGTCCTGGTGAAGAAGGCTCACCGCGAGATTCTGGACcatgagaggaagaggagggtgGAGCTGAAGTGCATGGAGCTTCAGGAGATGATGGAGGAACAGGGATATTCCGAAGAAGAAATCCGGCAGAAGGTTGGAACATTTCGGCAGATGCTGATGGAGAAGGAGGGCGTGATAACTCGAGAAGGCTTGCACCCTCGTCCACCGGTTAGGCTGCTTCCTCACGAGGATGAAGATCACATGGGAAATGCCGCGTACATCGATGGATATGAGGAAGACTATGATTGGGATGGAGAATATTACGAGCAAGATTCAGCTGCCTACGATGAATGCAGATCCAAGAGGAAATCCAGCAGTTCACCTTCCCCTCGGCcaaagaagaggaaaaagaagaaggCAAGGAGACACAGTCGAGCTGACAGCCCGTCTCCAACCCGCAGAGACAAGAGGAAGAAAGGCGGAAAGAAACACAAGagagacagGTCTACATCTGGCtcaaggaggaagaggagacaCAGATCTGGGAGccccaaaaacaaacacaaagacaagaacaaacagaaaaagagGTGTTCGGTGGAGTCTCCCAGCAGGAGTTCTCAGCACAGAGGCAGCTGCTGTAGTTCCCGCAGCGGATCCGTCTCCTCCACCGCCAGCGTCTCCAAATCACCCAGCAGATCAAGTGCAAAGTGCAGGAACGACAGGCACAAACAGGAAGGAAGTCACTCCAGCCACAGCCCACCGCCGTCCCCCAGCACTGATCAGCCAATCACGTGGCAGAATGGGAACCACAGCGTCCGTGTACGCAATGGCAAAGATTCAGGAGCCAATCACACGGAGGGGAATAAAGGGATCGATCTTCGCTCTCTGGCTCCGTCTCCCTCGAGCGCGCAGACGCACGCGTCGCCTCATCTAAGAGGTGCTAAACACCACGCCGACCGCCCCAGGAGCCCCGGAGGAGCAGCGGCGCAGACGGCAGAGGACGGCTGCGCAGACGACAGGCCGGCGACGGGCAAAGCGCTCTCAGACGCGGCGGGGAGACGCGGCGGGAGGCCCAGGCTTCGAGAGAAGACGTCGCGCTCGCCGGCCCACAGCACTGACACTGAGCCACACACCAAAACCAAGAATCAGAAGAAAACGAAAGGATCTCATTCGTCGAAGCGGCACCATCGCGGACGCGGCCAGAACCATCACCGGAGCTCCTCGGTGTCTCCGGGTCGACACAAACACACGtccaagaagaagaagagcaagAGCCACGGGACGAGCCGGCAGAGGAGCAGCTCCTTCAGCAGCGGGAGGTCGTCGTCTCGAGGACCCAGCAAGAACAAATCACCGCACGTCCGACAGAACAACTCCAGGGAGAGAGACAGTCCTCATCACTCGGATGCAGAACGAGCTCGGCGCCGCTCACGCAGCTATTCTCCCATCCGTAAGAGACGGAGAGACTCCCCCAGCTTCATGGAGGCTCGCAGGATCACCAGCGCCCGAAAGCGTCCCATCCCGTACTACCGGCCGAGTCCGTCCTCGTCCAGCTCGTCCAGCAGCTACAGCAGCTCCAGCCGCAGCCGCAGTCGCAGTCGCAGCTACTACAGCTACAGCAGCTCCAGCAGCTCCAGCCGGACGGGCCGGAGCCGGAGCCCCAGCCCCGCGCACAGCTACTACAGCCAAAGCAGCTACGACAGCCCCGGCTTCTGAGAGACGCCCGACAGACGTGCTAGCATGCAAAAACCGAACGCAAATGATAAGACGTGTTAAAGGTGAAGAGAGTAATTGCGCTCGCTCGGtacttttgtcttgttttccagtacaaatGTGGAGGAACGTTTTAAAGCGCTCCTGTTATGGGTAAAGAAAGtccatgcaaggtcaaaaaacacttcgttgtcttttaatatgcatttagcGTTATCTTGTTTGGTCAACGATTCTGTGGCAACATGAAAAACTGCTTGGGACTCGACTTCTTcgttttgagagacaataactaaCGTACATTatacggtgcactttcagatttaaaactaaaagatcattttcaaaaatccgtaacggggcactttaaaacaaaatacatcagGGTAACAAAACGgtgcatgaataaaaatgagtttatgcttaaaagcagaaaaaaatatcataaaactaaattgaatttaatgtgGAAGTCGTTATTTTTTTGACCACTAtcttcattttgcttttttttaaataaattttgatttatttattacatttagattacacATTTATACTGGAAAAATCCTGgctgagaatttttttttgccgtttataaatgtatttattattattatttattttttagcgtGTCTGACTCAAACTGGATTCTATTTAATTCATCTGTGACCGTGTGATGCAGAGCTCACCCCCTTCACCTTTAACATAGGCTTTGTTCGCTCAGAAAgcaaaaatcattattaacttgaaaattatttatttctgacgCAAATCCACTCTCTCCGATTTTCTATACTTCCGAAAGcataacaaatgcataaaatctGATTTTTCCAACCTCTCTTTCCGCAGCGactattaaagtaataataatgatgcttATGGCGTTATCGCTGTGGTAGATTATGTAGATGCACCAGATATGATGCATAAAGAGCACTGTCTGAACAAACACTTGAAGTGATCTTGAAGACTGGATTTGAGTGTTCAGTGCAAACTAAAGCATTTTAGGAAGCGAACTGATAAATAACTTTAATGTATTTGACGTTTAAAATCAGCTGTTCATTTCACTCAGTAAAACTGCtgactaaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaca

Function

symbol description
srrm3 Predicted to enable mRNA binding activity.

NR:

description
PREDICTED: serine/arginine repetitive matrix protein 3 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043239951.1 False 3219 mRNA 0.51 14 31506479 31567681
XM_043239952.1 True 3219 mRNA 0.52 14 31506479 31567684

Neighbor

gene id symbol gene type direction distance location
hspb1 LOC107591466,LOC107667824,LOC107725127,LOC107562193,LOC107654311,LOC107734358 coding downstream 3449 31498489 ~ 31503030 (-)
LOC122345520 LOC107663881,LOC107725093,LOC107654310,LOC107734346,LOC107563427 coding downstream 51971 31369810 ~ 31454508 (-)
ca4a LOC107663683,LOC107654307,LOC107734368,LOC107719346 coding downstream 309512 31191163 ~ 31196967 (-)
gusb gusb,LOC107719352,LOC107701859,LOC107654306,LOC107734369,LOC104964597,LOC107591494 coding downstream 351366 31142577 ~ 31155113 (-)
rplp0 rplp0,LOC107654305 coding downstream 393746 31108723 ~ 31112733 (-)
LOC122344718 LOC107725156,LOC107654314,LOC107591470,LOC107734345,LOC100535945,LOC107562196 coding upstream 1096 31568780 ~ 31590397 (-)
LOC122344719 c1qbp,LOC107725147,LOC107664384,LOC107654317,LOC107734359 coding upstream 26793 31594477 ~ 31598310 (-)
LOC122344717 LOC107664759,LOC107725124,LOC107654315,LOC107734362,LOC107562201 coding upstream 32541 31600225 ~ 31613830 (-)
si:ch211-283g2.1 si:ch211-283g2.1,LOC107734371,LOC107591505,LOC107654320,LOC107562197,LOC107667012,LOC108437645 coding upstream 83821 31651505 ~ 31659662 (-)
si:ch211-283g2.2 NA coding upstream 93794 31661478 ~ 31667615 (-)
G40995 NA non-coding downstream 382 31423085 ~ 31506097 (-)
LOC122345708 NA non-coding downstream 8385 31456500 ~ 31498094 (-)
G40996 NA non-coding downstream 11210 31435649 ~ 31495269 (-)
G40842 NA non-coding downstream 226048 31280177 ~ 31280431 (-)
G40841 NA non-coding downstream 233478 31272686 ~ 31273001 (-)
G41034 NA non-coding upstream 79174 31646858 ~ 31648612 (-)
G41023 NA non-coding upstream 87899 31655583 ~ 31701818 (-)
G41019 prdx4,LOC107665442,LOC107591478,LOC107734341,LOC107654298 non-coding upstream 116284 31683968 ~ 31684836 (-)
G41018 LOC107734365 non-coding upstream 124182 31691866 ~ 31695788 (-)
G41037 NA non-coding upstream 144667 31712351 ~ 31732259 (-)
LOC122344987 LOC107591496,LOC107663763,LOC107725109,LOC107734348,LOC107563429,LOC107654309 other downstream 156030 31331349 ~ 31350449 (-)
G40752 hspa5,LOC107686379,LOC107743071,LOC107687227,LOC107567952,LOC107734417,LOC107734415,LOC107686377 other downstream 680121 30817732 ~ 30826358 (-)
G40713 lzts3,LOC107567954,LOC107687254,LOC107574519,LOC795227,LOC107665914 other downstream 713760 30789633 ~ 30792719 (-)
G40711 NA other downstream 773119 30631028 ~ 30733360 (-)
fubp3 fubp3,LOC107689604,LOC107687236,LOC106566971 other downstream 893338 30590843 ~ 30613141 (-)
apooa apoo other upstream 134769 31702453 ~ 31711737 (-)
G41035 LOC107734367,LOC107665727,LOC107725151,LOC107591476,LOC107654325,LOC563292 other upstream 153586 31721270 ~ 31722906 (-)
tnca zmp:0000000846,LOC107715542,LOC107557573,LOC107591511,LOC102306937,LOC107725145 other upstream 546212 32113896 ~ 32174064 (-)
LOC122346090 LOC107704013,LOC107725152,LOC107748063,LOC107654332,LOC107557589,LOC107594564 other upstream 646347 32214031 ~ 32293782 (-)
LOC122346085 LOC107748069,LOC107679343,LOC107594586 other upstream 715853 32283537 ~ 32314631 (-)

Expression


Co-expression Network