mtmr12 (mtmr12,LOC107746804,LOC107552602,LOC107708634,LOC107602020)


Basic Information

Item Value
gene id mtmr12
gene name mtmr12,LOC107746804,LOC107552602,LOC107708634,LOC107602020
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 15280214 ~ 15292882 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043239960.1
TCTTTCAGCCAAAGGAAATCGCGCCGGAGAAAGGAGAGGtggagagagagcgcgagagggAGAGGAAAGTTGGGCTGCTCGAGCGCTCCCGGATTTCCACCTGACTGCTCGGGAAGCGGGACACTGGGACAGGCAAAATGTTGAGTTTAGGGAGCGGAGGAGCGAAGTCCACTAAACCGTCATTTGTGTCTTATGTCACACCCGAGGAAATAAAATTGGAGAAAGACCCaccaaagaaagagaaacatccTGATTTGCTACCAGGTGAAGTGGAGTTCTGTAGCGCCAACCCCATTCTCAAATACACTCAAGATGATCTCTCCCAGCGTGGCGTCTTTGGCACATTGTTCTGCACCAATTTTCGTGTTACGTTCATTAGTGATGAGGCACCACAGGAGGAGACGGCCAAGACCTTTAAGAACAAACTCTACGGAGAAAATGACATCCCTTTAATGTGTGTGGATCACATCTATGGTgtttatgatgaaaagaaaaaactgataACAGGAGGCCTTGTGAAGAACAAATATCCATCTAAAATGATCATTCACTGTAAAGACCTACGAGTCTTTCAGTTCTCTTTGACATTCACTAAGGAGGAAGATGCCAAAAAGatctTTCAGGGTATTGCTCACCATTGTTTGGAAGAGAAATCTCTGAAATGTGTCTTTGCCTTTTCCTATATGGGGACGCCAAGCCCAGAAATGCCGCGGAGACAGGAGACAATTATGTTTGACTCAACAGAGGACTGGACCCAGGAAATGAAACGGACAAAAGCGAACTGTAGATTAGTCATTGAAAATGAGAACTTTGAACTCTCTCAAAGGTTACCGAAGTACTTTGTCATCCCATCAGCACTAGGAGATTTATTCAGCTACCAAGGAAAGGGATTACCAatttgGTGTTGGTCTCATCACAGCGGTTGTGCTCTCTTCAAAGCATCTTTCCTGCCTGTGACACAGGAAGATGGGGATTTCCAAAAGCACTTGGACACaatgataaATGCAGTTGCACATAATTACCTTTACTCTGTAAAAACAGAGGACCTTTCAGAATCACTTCCTAATATCCAAGACATCCAACAGTCGTATAACAAGTTTAAACAATTCTTTCTTATCGAAAATTCAACTGATTTTTGGTTGTCAGATGTAAAATGGTTCTCTTCCCTTGAAAGTTCAGGATGGCTAGACATTATAAGACAATGTCTCCAAAAAGCAGTAGAGGTGGTTGAATGTCTTGAAAAGGACAACACAAATGTTCTTATCACAGAGGAAGAGGGAACAGATCTGTGCTGTGTGATCTCCAGTCTGGCTCAGATAATGCTCGACCCTTATTACAGGACACTGATAGGTTTCCAGAGTCTAGTGCAGAAGGAGTGGGTGGCTGGTTGCCATGCCTTCCTGGATCGATGTAATCACCCCCATCAGAAAGACAAGGAGTGTCATTCTCCAGTCTTCCTCCTGTTCCTGGAGTGCGTGTGGCAGCTTGTTCAGCAGCACAGCCCGGCGTTCCAGTTCTCCGAGACTTACCTGACTGTGCTGTCCGACAGTGTTCACGTGCCTATCTTTAGCACCTTCCTGTTTAACTCCGCTCATCACAGAGAAAGTTTTATGAAGGCAGAGTCACAGCTTACACAAAGCGGCCCATTGAGCTGCCCTACAGTGTGGGACTGGTCTGTGCAGTTTGACAGCAGGGCCCAGAATTTCTTCTTTAACCCCCTGTATTCAGAAAAGGTGAAACAAGAGAAAGTCGTACGCAGACCTCACAAGCCGAAGcaCCAAAGACAGTTGTCCTTACCCAGCACAGCTTTCAAAACCCCACTGAAGAAAGGTTTCTTTAAGGACGAGACCGACAGTCTTAAAAAGATGCTGCGTGTGAAGCGTCTGAGTCGCTGGATGGGGTCTCCAGACTCCCCCGCCGCCACCACCCGAGAGTTCTACGAGTCCTGGCAGCACCGTCCCCTGGACTACCACGGCCTCCTGCTCCCCTGCCTGGACGGACCGGCTGTCCGCGTCTGGATGCAGCGTTACCTGCGCTGGATACCTGAGCTGTACATCTTGGGCGGAGGCTCTGTGGCCGTCATGACCAAGCTCATGGAACTTCTGAATCAGGTGCAGGATCTGAAGCGTGTGCTGGAGCAAAGAGACTCGTCGCAAGCTGCTAAACTTGATCACCGTCCATACATTCAGCACCGGCTGCTCTCGTTCGGCTCCTCGGGACGACTGTCATCCTCATTTCCCTTCGCTTACACCCGCAACCGATCTTTCAAGCCCATCATTCCTACTGGTCTGATGCAGAGCCTTATGTTAACTGATAGTCTAGCCAGTCAGGAGGATGAGGCCAGTTCGGTTGTGAGTTTTGTTTAACAGAGAGTCTTTTTCGCATATAAAACATTCgtccatttattattaaattataatattgtgaGGTAAATACGGGATTATAGTTGCCTTGTCAGATTCAGATTAGGTGCTTAAAGTGCCTTTGGTGCTAAAGCGTGTCCTATTGTAAAGTAAAACAGGCTTTTGTCAAACCACATGTGCCCTACTGTATCGAAAACCTAACATGAGCCTTCGAACAGGATGTaagctcttttatttttgatgttcttAACGGAACAATAACTAGAAATGTTCTCTTGCTCATCACAAAACAGGAACAGGACGTAACCCTGAGCCTCCAGGCTTTCCATAGTGCTGCGTTACATAAAATCATTACCAGGTAACATTCCAAACAGTATTCCATTCCGGTGGTCTATGAATGGATGAAATTATTCTGAATGATAGCAGCCGTTATAAGAGTTACAGATATGCGTGTCTCCTAACATGTTACTGTACTCAGAGGGCTGGAAAAAGGCCTTAAAGCATGTTTCTGTATCTAAAGAAGGTTAGCCAAGGAAAATAGTGTGGAGCCATCTGCAGGGATATTATTGTTactgctgcatttaaaaatgtattgaagattacattataattactgTGGTCCAATGTGACTGCTCATTTATTTCCCTAGAGGCCAAGTTAACcctaataaatgttaataaattaattaggttaatattttttttcctaaagaAAACGTAAAACAGGAAGTAGGAACAATACATGAGATCAGCTGTCCCAGAAGTTCAGTGCTTTATTGCGTGTAAACCGTGGGGCTGTCTCATCCAGTCACAGGTTGGCTCTTAACACGATACAAGCGTCtgcaaatataattattcaaaCATAAGCTGATGCTGTATCTGCATTTGtgcacattttcttcttttcctttctgAGGTGCCTGTAGGACTTCTGCCATAAATCAACAAGCACTTCattcaaattgtgtttttcagcatttgaaatgtaatgaaaCTGTTATTTGCTGgcaaattttgtttttgtttacagcttTTTCACCCTCGTTTTGCACTACTGCTCCTTGCCAGTCGATCACTGTTACTTGAACAGTCAGCTGTAAATCTGATTCTGTTcacttcagttcagttcagcACTTCTGTTGTGTATAGCAAGTGACTGCAAGCTGGATTTTGAAACGATTACTGAACTTAATACTGtacaattgttttgtattttgctaTAACCAACTTTTAATGTTCACGTTCAGAGTTTGACCTTGAAATATATGATGTcggattgttttattttggaccATTGACTTCAAAGTGATAATTGTGATGTAAAAGAAGCATTAAATACCTTTTATATATGCACTTGAAAAAATGCTCCCCCCCAGAATATGATtgaaataaaagatgttttgcaATCATCA

Function

symbol description
mtmr12 Predicted to enable phosphatase regulator activity. Acts upstream of or within locomotory behavior and skeletal muscle fiber development. Predicted to be located in sarcomere and sarcoplasmic reticulum. Orthologous to human MTMR12 (myotubularin related protein 12).

NR:

description
myotubularin-related protein 12

GO:

id name namespace
GO:0048741 skeletal muscle fiber development biological_process
GO:0007626 locomotory behavior biological_process

KEGG:

id description
K18085 MTMR10_11_12; myotubularin-related protein 10/11/12

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043239960.1 True 3774 mRNA 0.44 16 15280214 15292882

Neighbor

gene id symbol gene type direction distance location
golph3a golph3,LOC107681169,LOC107552603,LOC107746803,LOC107602021 coding downstream 942 15268676 ~ 15279272 (-)
parp8 parp8,LOC107746800,LOC107661236,LOC107708633 coding downstream 80377 15174388 ~ 15199837 (-)
isl1a isl1,LOC107661270,LOC107708623,LOC107599171,LOC107602011 coding downstream 152042 15121996 ~ 15128172 (-)
fsta fst,fsta,LOC107746798,LOC107599173,LOC107708632,LOC107602023,LOC107661233 coding downstream 256758 15016899 ~ 15023456 (-)
hspb3 hspb3,LOC107746796,LOC107599178,LOC107744878,LOC107602000 coding downstream 360275 14918926 ~ 14919939 (-)
eef2l2 eef2l2,LOC107681082,LOC107746808,LOC107552597,LOC107676651,LOC108414462,LOC107708638,LOC108255789 coding upstream 158142 15451024 ~ 15457371 (-)
akr1a1a akr1a1a,LOC107602015,LOC107708643,LOC107676648,LOC105901177,LOC108414433 coding upstream 179210 15472092 ~ 15477073 (-)
dnajb5 dnajb5,LOC107746810,LOC107681063,LOC107708641 coding upstream 187298 15480180 ~ 15493670 (-)
epg5 epg5,LOC107746812,LOC107681055,LOC107676662,LOC107708644 coding upstream 213084 15505966 ~ 15529346 (-)
riok2 riok2,LOC107746813,LOC107681048,LOC107676637 coding upstream 237192 15530074 ~ 15534492 (-)
G36811 NA non-coding downstream 110856 15169047 ~ 15169358 (-)
G36714 NA non-coding downstream 374593 14905385 ~ 14905621 (-)
G36708 NA non-coding downstream 399149 14880865 ~ 14881065 (-)
G36696 NA non-coding downstream 581261 14698736 ~ 14698953 (-)
G36631 NA non-coding downstream 627821 14652095 ~ 14652393 (-)
G36967 NA non-coding upstream 268840 15561722 ~ 15562078 (-)
G36968 NA non-coding upstream 269266 15562148 ~ 15562363 (-)
G36969 NA non-coding upstream 271216 15564098 ~ 15565262 (-)
G36986 NA non-coding upstream 420793 15713675 ~ 15713975 (-)
G37067 NA non-coding upstream 436321 15729203 ~ 15729893 (-)
pdzd2 pdzd2,LOC107746802,LOC107681406,LOC107661237 other downstream 15269 15205951 ~ 15264945 (-)
LOC122345141 LOC107752369,LOC107661250,LOC107567461 other downstream 977833 14292063 ~ 14302381 (-)
znhit1 znhit1,LOC107752359,LOC107661214,LOC106567874 other downstream 997594 14279674 ~ 14282620 (-)
rnf214 LOC107663407,LOC107746393,LOC107599207,LOC107596114,LOC107734124,LOC107661199,LOC107599223 other downstream 1223509 14040982 ~ 14056705 (-)
tmprss13b LOC107746439,LOC107663381,LOC107599230 other downstream 1270678 14001934 ~ 14009536 (-)
zfr zfr,LOC107746805,LOC107681158,LOC107552600,LOC107602019 other upstream 974 15293856 ~ 15308440 (-)
npr3 LOC107681138,LOC107746807,LOC107552598,LOC107602007,LOC107708637,LOC107661273 other upstream 57134 15350016 ~ 15367413 (-)
alkbh2 alkbh2,LOC107746816,LOC107552593,LOC107676640 other upstream 275137 15568019 ~ 15578967 (-)
cenpv cenpv,LOC107718355,LOC107676655,LOC107746825,LOC107680877,LOC107553589,LOC107552586 other upstream 410651 15703533 ~ 15709430 (-)
emc6 emc6,LOC107680863,LOC107746824,LOC107552584,LOC107553592,LOC107552561 other upstream 432145 15725027 ~ 15728108 (-)

Expression


Co-expression Network