LOC122345659


Basic Information

Item Value
gene id LOC122345659
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 11682220 ~ 11689922 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043239992.1
TTGAACTGCAGCTACACGCCCTGTTATAAATCCTTACGCCAAATAAAACGTTTTAAGTCTAAAACGTCCCGGTGTTCTatCAGGCAGTGAATCTGCAGAAAAAAGGAGAGAAAATGGGGGCTGACAGCAACAATGAGTTTCGCATAAAATTATTTGAAGATTCTCAAAGAGATTCCACCCTTCGGTGTCACTTATCTCCTGTATTCAGTGCTGTCGATATGGAGATCAGATGGTTTAAGGaaacagaatgtgtgtgtttctataaGAACAGACGGCTGATAGAGGGAGAGAGTTATAAAGGCATAATGAGTCTATGCATCGAGGAGCTGAAGAGAGGAATTGTGTCCTTACAGCTGAAGGATGTCAAAGAATCATGTGTTGGTGATTACCTCTGTCAGGTCACCAGTGGAAACAAGATGGCGGAAATAACAATAAGAGCATCATTACAGACCTATAAAGATCAGAATGAAACGTCTCAACAAATAACCACACTAGGGACTGAACAgACTGAAAAACAATGGACTGATATGGAGAGAATAAACATGGTAAATTCTGCTTTATTGGCAGTTTTCAATACTCTAGAAAAAAACGATCTGCAAAAGAAAGATCCCCAGGGCGCCGATGCTGCAGCGATGCAGACAGACATAAACATTGAAGAGAACCAGGATCAGACTGAGAAGAAAGACACACAACAGGAATATACAAGCAGACGTATGAATGAGAGCATGGATTTCTCAAAGATGGAGATGGATACCAGTGAACCGGTGGAAACTACACCAGGAAACAATACCTCCTATTTGCGTAATCAACAACCGGCATGTTCAAGTCAGAAATCACTGGCCAGTGatgttaaagTGTATGTCTTTTCGAGTGGAAATACAAAATGCTATGACAAGACTTTTACTGACATACTAAAAAGCAGAATTGAGAATCTGACAGAAGATCCGTCCGTGTACCAGAGCGACATCATTCTGGCTTTCTGTCCCGTTGTTTCCCGAGCTGGAACCGACATTGACACAGCTCTTGAAATATTCAATTACAAGACAGAAACTCAGCTGGCTGTTCTAGTGGTGCTTCATCACACGTTTGACTCGAAGAAAGTGATCCCAGACAGCAGCCGATATGTAAAGAGGACAGACATACTCACAGTGGACTGTCTGTTCAATGAGGATACAGGATTACTGAACTGTCAGAAGAATTTAGCTGCGGCTGACAAAGTTGTGAACTGGTTAATACAACAGAGGATTCAAACAGGTGTCAAAATACATCTACGTCAAAatttaacaACAAACTACTTGACAACCCCAGGAAAAATCCAACAAAAAAGTGAACAACTAACATCAAGGTTCAGTTCAtttctaaaaaggaaaatggGAAACAACGAACCTAGTTCAATCCCAGTTCATTCTCTAGAAAAGGTCAAAGTGTTCTCCATTTTTTCTGGAAAGATAAAAAACTGTCAGAAGGAGTTTTATGGCATCCTGAGAAACCGAATTGAGAATCTGAAGGAAGGTCGCACGGTGGACGAAAGCgacattattttacttttctgtCCTATTTTTTCTCGACCTGGAACTGACATTGATTCAGCACTGAACAAGATCACTTACTCTACAGGCTCTAAGCCTACTGTTCTAGTGGTGCTTCATCACACGTTTGACTCTGAGAAAGTGGTCCTAGACAGCAGCCAATATGTAAAGAGGACAGACATACTCACAGTGGACTGTCTGTTCAATGAGGATACAGGATTACTGAAGTGTCAGAAGAACTCAGATGCGGCTCACAAAGCTGTGAACTGGTTAAAACAGCAGggaGAAAAAAGAGGCATCACAGTACCGTGTCAGTACAAATCATCTAGGTCTCCATATACATTGACACCTTCAGTAACAGGACATACAGTGGATTTTCCAAAACAGAAACCTAatgtgcGAGATTCCTCCTGTCCAGTGGATTATTTTGTCCATGTGACTAAAGACACATTCAAGTGTGATGAGGACTTTATAAAGAGTTTACAGCAACGGGTGTCTCTGAGGAAAGTTCAGAAAGTGCAGGAGAGTGAAATCCTTCTGCTCTTCTGTCCTGTTTATTCACAATCTGACATCTCTTCAGCATTACAAGAGTACCACAAGATATCAGACAAACCTGCTGTTGTAATTTTTCTCCATGAGACACTGGATTCAGGCTCTGTCCCAAACAGCGgtgaatatgtaaaaataaaggaCAGTTTAGTGGTGGATTGCATTTTCTGTGATGGTGAAGGACTGCCTGAATGCGGAAAAAATTGGGAAGCAATTTCTGCAGCCGCAGACTGGATAAAAAATAAGTTGAGAGACCACTAAATCATCTCCCCAACCATTCAGAAAGATCCTGTGATTCCTAACTCCACTCCTCACGGTTGAGATCGGCTTTAACTTGCGTCCGTCAAGTGCTGATGTTTTGCTTCATGTATTTTGTGATATTTGCAGTAATAGAATCAGCTGTCTAATTAGCATCCAGTTTTTTTCCAGCCACAGTCAACTAAAAACAGATGTCATTTAGGTCTTTGTTTTGTGGACTATGGCATGCGCTTCAATTGTATTTACAGAAGCCTAACATGTTGACGGGCATTTACAAAACTTTATAGTGAATAGTTCAAAAGTCCTATTGGCTACTAATGTATTCAGATAAATGACCCGACAGCTGTATAGCTCTCCTTGCCGAATGGCAAAGGTATTATAATAAACCAACTTCTGTCTAAAGCCTTATGTTAATGTAGAGGCTAATATAACTATGTAACAAATTAGCTCAGTTTATGTGAATTTAAATAGGAGATTTGTAGTGACTTGTTCCTGTGTTTGTGTTAAGTAATCATATCTGCATGATCTATTGATAGGTTCTGTCTGCTACTGTGCCTTTACTCTAAACTGTTACCTTATACTTATAATTACAAATCGCATTcaattttgtgtgtatttgtgtcttttgttcaactgtattattttgtcatttttttgtttactctcTTAACTTTTTAGGTCTATATATGTCTTAATAAATGAGTCTGATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043239992.1 True 3047 mRNA 0.40 20 11682220 11689922

Neighbor

gene id symbol gene type direction distance location
rpl36a LOC100304549,LOC100219516,LOC106514001,LOC103353280 coding downstream 29504 11650439 ~ 11652716 (-)
tnfsf10l4 LOC107741286,LOC107680360,LOC107565437 coding downstream 60780 11619110 ~ 11621440 (-)
mtnr1c mtnr1c,LOC107756550,LOC107741285,LOC107672899,LOC107680355,LOC108442058 coding downstream 82378 11583955 ~ 11599842 (-)
vma21 vma21,LOC107741184,LOC107565438,LOC107680358,LOC107756551,LOC107672888,LOC107597345 coding downstream 99407 11580834 ~ 11582813 (-)
npas2 npas2,LOC107672582,LOC107597247,LOC107741183,LOC107565421,LOC107680380 coding downstream 108257 11527062 ~ 11573963 (-)
LOC122345938 NA coding upstream 14309 11704231 ~ 11707716 (-)
arhgap20b LOC107672940,LOC107597255,LOC107663218,LOC107746244,LOC107573640 coding upstream 41597 11731519 ~ 11768014 (-)
fdx1b LOC107672951,LOC107746235,LOC107597349,LOC107741288,LOC107663211 coding upstream 87690 11777612 ~ 11786143 (-)
zc3h12b LOC107741193,LOC107746237,LOC107672716,LOC107597257,LOC107663225 coding upstream 135345 11825267 ~ 11840042 (-)
shisa2a shisa2,LOC107746248,LOC107672960,LOC107597350,LOC107741289,LOC107557100 coding upstream 157205 11847127 ~ 11848955 (-)
G35592 LOC107741189,LOC107680392,LOC107565414,LOC107733362,LOC107597318 non-coding downstream 7403 11670957 ~ 11674817 (-)
G35434 NA non-coding downstream 351854 11304281 ~ 11330366 (-)
G35522 NA non-coding downstream 369390 11311549 ~ 11312830 (-)
G35450 NA non-coding downstream 432214 11249199 ~ 11250006 (-)
G35499 NA non-coding downstream 461329 11219968 ~ 11220891 (-)
G35594 NA non-coding upstream 2628 11692550 ~ 11694947 (-)
G35597 NA non-coding upstream 6269 11696191 ~ 11697674 (-)
G35599 NA non-coding upstream 8026 11697948 ~ 11699666 (-)
G35601 NA non-coding upstream 11311 11701233 ~ 11703708 (-)
LOC122344709 NA non-coding upstream 79938 11769860 ~ 11774612 (-)
G35554 LOC100304549,LOC100219516,LOC106514001,LOC103353280 other downstream 29593 11583780 ~ 11652627 (-)
hmgn7 hmgn7,LOC107672554,LOC107756557,LOC107680402,LOC107565427,LOC107748629,LOC107597243,LOC108260037,LOC108442050 other downstream 215098 11419955 ~ 11467122 (-)
slc25a15b slc25a15b,LOC107744499,LOC107687678,LOC107599942,LOC107726376,LOC107672737 other downstream 713102 10960311 ~ 10969118 (-)
G35384 NA other downstream 756057 10923927 ~ 10926163 (-)
G35371 znf703,LOC107599934,LOC107672788,LOC107744445,LOC107687685,LOC107726392,LOC107592299 other downstream 808156 10868364 ~ 10874064 (-)
msna msna,msn,moes,LOC107746233,LOC107597256,LOC107672695,LOC107663223,LOC107741191 other upstream 105734 11795656 ~ 11815944 (-)
sh2d1aa sh2d1aa,LOC107713049,LOC107741293,LOC107663232,LOC107557102 other upstream 475481 12165403 ~ 12169410 (-)
G35825 tenm1,LOC107557119,LOC107713050,LOC107597323,LOC107741271 other upstream 627881 12317803 ~ 12319685 (-)
G35936 NA other upstream 811992 12501914 ~ 12505958 (-)
G36047 NA other upstream 1363922 13053844 ~ 13054857 (-)

Expression


Co-expression Network