aacs (aacs,LOC107672615,LOC108255473,LOC107684991)


Basic Information

Item Value
gene id aacs
gene name aacs,LOC107672615,LOC108255473,LOC107684991
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 5351446 ~ 5380269 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240048.1
TCCGCCGCCGCCGGTTGATTATGTGCGGCTGACGCTCGGAAGTGACCCATGTGTCCGAGCTGCACCAATACACGATCACCGGATCGGCCCGTTCAACTCCCGTGGTGCGCCTCTCGCAGTCCTCGTAGGTTATTCACGACACGCCGACGCCTGTCACCCGATCATGTCTAAAGACACGGAGGCCAAGAGCGAGGAGATTATGGAGTCGAAGGTGCTCTGGTACCCGGACTCTAAACGAAACACGCAGATGGACCGATTCCGGACTCAAGTGAACCGGGACTTCGGGGTGAATCTGGCCAATTATAATGACCTGTATCAGTGGTCCGTGGACAGTTATCCGGAGTTCTGGGCACAGGTTTGGAAATTCTGTGGCATCACTTGCTCAAAGGTGTATGAGGAGGTGGTCGATGCGTCTAAAAGGATATCCGATGCACCCGAGTGGTTTAAAGGCGGCAGACTGAATTATGCAGAGAACCTGCTCAAACACAAAGACCAGGACAAAGTGGCTCTCTATGCGGCAAccgaGGCAAAAGAGGAGATTGTCAAGGTGACTTTCGGAGAGCTGAGGCGTGACGTGGCTCTCTTCGCTGCCGCCATGAGGAAGATGGGCATCAAAACTGGAGACAGGGTCGTAGGATATCTTCCCAATGGGATTCATGCTGTCGAGGCCATGCTCGCTGCTGCCAGTATAGGTGCCATCTGGAGTTCAACCTCTCCGGATTTCGGCGTCAACGGAGTTCTAGACCGAATTTCTCAGATCCAGCCCAAGTTGATATTCTCAGTAGCAGCTGTTGTGTATAACGGCAAGCAGCATGACCATATGGAGAAACTCCAAAACGTTGTTAAAGGACTCCCTGACCTGGAGAAGGTTGTGGTCATTCCATATGTTCGCTCGAGACAAGAGACTGACCTCTCCAAGATTCCCaacagTGTGTTCCTGGATGACTTCTTAGCCACAGGTAAAGAAGGGGATCAGGACCCTCAGCTGGAGTTTGAGCAGCTGCCTTTCTCTCATCCTCTTTTCATCATGTACTCTTCGGGCACCACAGGAGCTCCCAAGTGCATGGTGCATTCTGTGCtgGGCACTCTCATCCAGCATCTTAAAGAACACGTTCTCCACGGCAACATGACCTACAATGATGTCATCATATATTACACTACGACGGGCTGGATGATGTGGAACTGGATGGTGTCCTCTCTAGCTGTTGGGGCTTCTGTGGTCCTGTATGATGGCTCTCCTCTTGTTCCTACTGCCAATGTGCTCTGGGACCTTGTAGACCGTCTGGGAATCACGATTTTTGGGACTGGAGCGAAATGGCTGGCTGTGCTGGAGGAGAGAAATCTAAAACCTGCAAACACGCACAACCTGCAGACCctccacacactcctctctACAGGATCTCCATTGAAGCCTCAGAGCTATGAGTATGTGTACAGCTGTATTAAGAACAATGTGCTCCTGGGGTCCATATCAGGTGGCACAGACATCATTTCATGCTTCATGGGTCAGAACATGACAGTTCCTGTTTACAGAGGGGAAATTCAGGCCCGAAATCTGGGCATGGCAGTGGAGTCCTGGAATTTTGAAGGGAAGCCTGTTTGGGGTGAGAGCGGGGAGCTGGTGTGTTTGAAGCCCATCCCGTGCCAGCCCACTCATTTCTGGAACGACGAGAACGGCAGCAAATACCACAAAGCCTACTTTTCTACCTTCCCAGGAGTCTGGGCCCACGGTGATTACTGTAAgataaatccaaaaacaggaGGAGTTGTCATGCTGGGGAGAAGtgaTGGAACCTTGAATCCTAATGGTGTTCGGTTTGGGAGCTCAGAAATTTATAACATTGTGGAGGCCTTTGAGGAAGTTTCCGACAGCCTTTGTGTCCCTCAGTACAACAGCGATGGAGAGGAGAGAGTGATTCTGTTCCTGAAGATGGGACCCAATAAGATCTTCAGACAAGAGCTGGTGGGGAAGATCCGAGGCGCTATCAGAGTAGCTCTCTCTGCACGACACGTACCAGCCTTGATACTGGAGACCAAAGACATCCCGTACACCATCAGCGGAAAGAAGGTCGAAGTCGCAGTAAAGCAGGTGATCGCAGGTAAGGACGTCACTCAGCGAGGGGCCTTCTCAAACCCAGACTCCTTGGACCTCTACAAGAACCTGCCCGAACTCCAGAACTTCTGAGTGCTCGGTACGTCTGAACTCCCAAATGTCCCGCGTTTCTGGGTCCCTTCGAAGGGTTCAGATTCTCTGGAAGTCTGTTGGAACTTTGGAGGAATCTGGAGGAATTTCTTGAGCTTTCAAACATCAAAGTTCTTAGTGTTCTCTACCTGTTGTGGCAAACTTGGCAACCCATTGGAACCGATGGAGTCTTTAGCACTTCCTCAGAAGGGTGACTGGTTCCTCTTGGAGAGAAAGCTTAGTGCCGTTTTATGCGATTCCAGCTTGGATCTTAAAGGGACATTTTATCTGTTTCTGTTATTGCGTCCACCAAGCGTTATATTTCCGAGGAAGGTACCAAAGTAATCGTCATTCCCATATTTTCCCTCTCAAATTTTGATACAATGTCGCTTTAACTGTGAAAGTATAGGAAAATATGGCTGAAAATCTCAAAATCGAAATAATTTATTCTCATGAATCATAAATCAAATACACAGACGTTACTGAGGATTGTGTATTGAAGGTTATTTTTCTGCTAAAGGCCATTTCTCCAGTAATACTGACTTTTTGGGTCAAACCGACTGTTTCTCAGAACCGCttacatttattagtattaatattacgGGTACAGGTTCCAGATTATGACCTGTTACCGTAATAAAATCAACGCACCTTTTTCAAAAATTCCCCCCCCAAAGCCTGACTTCCTGTCTGGAAGCatgaacatatttatatttttaaacaatatccTGTAAGTAAATAGCGTTTCATCACACCTGCTGTATTTGTAGAGTATATTATGCTGTCCAGAACTGCTCTCTGTTGTCTACTGAGTATAGATATGAACCGAAGCTGATGTAGCTCACTGGCCAAACAGATTTCCATatatttttccatatatattgtatatatttgattCCGTATATGCAGCTGCATGTTGCGTGCTACGCTAGATGCCCCTTCGCAGTGACACTATTTGGTCTCTTTCGTGGCGCCTTATATCAAGTTTTCATCAACAACTGAAGCTCATCTCATTTCTTTGAGTCATTCTTTGGTGTATAGCTTTATCATTGCCCACGAGGCGTTCTTCCATCACGCTTTTCATCGGAACACTGCACACATATGAAAAAACTGGGTTTGTTTGAGGTTTGAGGTTTTGAAAGTCAGCAAGACGTGATACCCAGATAACCGTATAACATTAGATTATTAGTTTATGTAACGTTTGCATTTGGAGTAAAGGGAAGAAACCTGGGCATTCGAAATTTATCTAACGCCGCAACGAAAAATAGAAAGTATTGATTTATGTCGGATCAGATTCAAGCTCTTTGACGTGTACTGATGATGCATTTACGCTCGCTTTGCAGCATATCTCAGAAACATTTATCAACAGCAAGCCGCCATCCAGAAAATCTTTTTCTCGTGACACTGAGAGAGGATACGCTGCAACCCGCTCGCAACGAAAGCCTAAAAATGCGCTGCGTTTTAatcgttttaaaataaattcgcGCCAGTAATGTCATTTCAGCGCTTGTTTACAACAGAGAAGCCTCAAACGCTAGTATTGATGTACATTTGACGTTTTattgggtcttttttttttttttggttcgaATAATGTAATCTAGGTTTGTTACAcgtttgaaaatgacatttttaaccTGTGAGTATATACGTTTGATCTCAGCGAGGATTTTCCTAAAAGATGCTACACACTACACAtctaaaaaatgcaaatgattttACATACATGCTAAAGGTTAGACATAATGAAACTCGAAAGGGCGTGCTGGGCCTTTAAGAGGCTAATTTCTTTTGAATTGAAACGGTTTAGAATAGAGGTGCAGATGGCAAGCAGTTGTGCAGATCGCTTGAATTTAAATCAGCCCTCGTTTCCGCTTCAGACAAGCAGGGACGGGTCTGTTTCACCTCATGCCCACCCTCGTGCCACCATATGCCCCATATCTGCTCAGCTTTGCTGACAGGACTGGTCTGGGACTGTGGACATACGGAAAGCTACCGAATCCTTATTTATTGGCAATCACTGTGGATTTCACTTTAACCTCTGGCTTGTCGCGAACGCATTCGTCCTCGGCGTTTATTTCATGTTTCCATACTTACCAATTTCATGAACATTCCATGGAGATCTATTCCATTTATTACAGTTCTACTACTTCTTTTTGATACAAGGAATTGGAAATGTTGGAAACAATGTTCCttattattgtattacattaaatgtatttggtGTACTACTAGTAAATACAAGGTGCTTTCTTCTTGGTGGCAAATGTAATGTTTCCtgctttgaaataatattattgtacatCGCAGAATGTGAATAATGATTACTAATATAGTTGAGAATATATTTGTTATGGGTATATTATGCCCATATGCTGTTGGACCGCTTCAGTTATGCTCAATAGGAACATACCTGTATTTCATGTGTAAAGATGCGTATTGTACTCCTAATTAAAGAGCTAAAAAATTA

Function

symbol description
aacs Predicted to enable acetoacetate-CoA ligase activity. Predicted to be involved in positive regulation of insulin secretion. Predicted to act upstream of or within fatty acid metabolic process. Predicted to be located in cytoplasm. Predicted to be active in cytosol. Is expressed in liver; nervous system; neural tube; and optic vesicle. Orthologous to human AACS (acetoacetyl-CoA synthetase).

NR:

description
acetoacetyl-CoA synthetase

GO:

id name namespace
GO:0006631 fatty acid metabolic process biological_process
GO:0005829 cytosol cellular_component
GO:0030729 acetoacetate-CoA ligase activity molecular_function
GO:0005524 ATP binding molecular_function

KEGG:

id description
K01907 AACS, acsA; acetoacetyl-CoA synthetase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240048.1 True 4652 mRNA 0.45 18 5351446 5380269

Neighbor

gene id symbol gene type direction distance location
si:dkey-215k6.1 si:dkey-215k6.1,LOC107684990,LOC107741256,LOC107672621,LOC107707847,LOC107548916,LOC107600130 coding downstream 17942 5169712 ~ 5333504 (-)
rnf215 rnf215,LOC107707831,LOC107656805,LOC107741259,LOC107672611,LOC107548928,LOC107600132 coding downstream 337505 5008086 ~ 5013941 (-)
zdhhc8b zdhhc8b,LOC107600124,LOC107672609,LOC107707819,LOC107741283,LOC107548914 coding downstream 350390 4949084 ~ 5001056 (-)
si:dkey-112e17.1 LOC107656819,LOC107548941,LOC107741260,LOC107672633,LOC107707820,LOC107600127 coding downstream 403493 4927327 ~ 4947953 (-)
galnt9 galnt9,LOC107600134,LOC107702212,LOC107719314,LOC103023100,LOC107570788,LOC108412666 coding downstream 793602 4487841 ~ 4557844 (-)
LOC122345752 bri3bp,LOC107684981,LOC107597359,LOC107672602,LOC107595913 coding upstream 3286 5383555 ~ 5388325 (-)
poli poli coding upstream 8550 5388819 ~ 5393629 (-)
ankle2 ankle2,LOC107597302,LOC107684979,LOC107672626,LOC107741250,LOC107595914,LOC107752143 coding upstream 18625 5398894 ~ 5410494 (-)
golga3 LOC107684982,LOC107595916,LOC107741281,LOC107672616 coding upstream 32400 5412669 ~ 5429468 (-)
ranbp1 ranbp1,LOC107684983,LOC107752129,LOC107597301,LOC107672632,LOC107741249 coding upstream 50297 5430566 ~ 5435131 (-)
LOC122345808 NA non-coding downstream 182197 5142578 ~ 5169249 (-)
G33334 NA non-coding downstream 275412 5075761 ~ 5076034 (-)
G33333 NA non-coding downstream 297543 5034111 ~ 5053903 (-)
G33332 NA non-coding downstream 317492 5032563 ~ 5033954 (-)
G33330 NA non-coding downstream 323631 5024945 ~ 5027815 (-)
LOC122344984 LOC107597340,LOC107752133,LOC107684988,LOC107672606 non-coding upstream 193895 5574164 ~ 5597629 (-)
LOC122344983 LOC107684988,LOC107597340,LOC107752133,LOC107741245,LOC107672606 non-coding upstream 207776 5588045 ~ 5595174 (-)
G33409 LOC107684993,LOC107597297,LOC106585658 non-coding upstream 221140 5601409 ~ 5602204 (-)
G33423 acacb,LOC107752147,LOC107654593 non-coding upstream 237996 5618265 ~ 5620705 (-)
G33434 NA non-coding upstream 273811 5654080 ~ 5654764 (-)
G33175 NA other downstream 728388 4622490 ~ 4623058 (-)
LOC122346168 srrm4,LOC107720865,LOC107702227,LOC107561260,LOC107656798 other downstream 1158365 4144856 ~ 4193081 (-)
piwil2 piwil2,LOC107560971,LOC107707823,LOC107702219 other downstream 1452868 3878650 ~ 3898578 (-)
coq5 coq5,LOC107560969,LOC107707852,LOC107656810,LOC107561264,LOC107702223,LOC107707851,LOC107560965,LOC101158254,LOC107755815,LOC107561265 other downstream 1598682 3744675 ~ 3752764 (-)
G32908 sema4c,LOC107697240,LOC107708238,LOC107699920 other downstream 2391269 2951462 ~ 2960177 (-)
G33758 LOC107596916,LOC107710760,LOC107700938,LOC107587412,LOC107693817 other upstream 1443902 6824171 ~ 6826182 (-)
usp20 usp20,LOC107691016,LOC107693839,LOC107710745 other upstream 1542577 6922846 ~ 6943203 (-)
G33998 LOC108444092 other upstream 2002077 7382346 ~ 7397153 (-)
LOC122345606 LOC107712378 other upstream 2326701 7706970 ~ 7711824 (-)
si:dkey-220k22.3 NA other upstream 2338296 7718565 ~ 7721758 (-)

Expression


Co-expression Network