si:dkey-193c22.1 (si:dkey-193c22.1,LOC107661268,LOC107602027,LOC107599182,LOC107744872,LOC107746871,LOC107736603)


Basic Information

Item Value
gene id si:dkey-193c22.1
gene name si:dkey-193c22.1,LOC107661268,LOC107602027,LOC107599182,LOC107744872,LOC107746871,LOC107736603
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 14876022 ~ 14880073 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240090.1
GCTGGTACAAGCAGTCAGGAAGTTAATGCCCTGAATGCGTTCATCAGGGCATACGGGATACTGGGATGTCATCTGCAGGTATTAGAACTACAAAAtagcttaaaaataatgatTGCGTTGAAGTTCTATTTCTCTCTTCCAGTGGTGGCAGGGGCATTATTAGTGGGCCTTCCTTACAGTATCTCTCTAGTTGCCCAATGGCTCTATGGCTGGCCCAATAAACCAggttatcaaaaatatatagaggCTCTCAAACCAAGGCGCATATACTGCCTTACAAGAGCCGTGCTGGAGATGTTGAAATATCTGCAGTATGGCAAACTGTACTTTCAGTGGAAACTGTGGTACagtaatgacaaaaataacaagCACTATGTGAAAGGTATAACCTTTGGCCGACGAGGGAACAAACTAGATTTATATTATTCACCAAGCATGGGCCGTTCTGATACTGCTTGTGTTCCTGtggttgtgtttgtgtatggAGGTGCCTGGGGATCAGGAGACCGCTCCATTTACTGTCTGTTAGCTTTACAAATGGCAAAAGAGCTTAACGCCTCTGTAATTTGTCCAGATTATTCCATATATCCGAAGggaaatgttttaaatatggttCAAGACATCACTGACAGTTTGATGTGGGTGAGAGAAAAGGGACAAACATTCAATCTTGATCAAgaCAACATAATATTAGTAGGTCATTCAGCAGGAGCTCATCTGTGTGCCCTTTCCACACTGTTTCTGGTGaacaatgcagaagagctgTTCATTGAGACCAACACACAGAGAGATCTTGTATCTGCTATTAAAGGAATCATAGgtTTGAGTGGCGTTTACAGTGTAATGGATCATTATAATCATGAGAAAATGCGGGCAGTTGAATATGTGTCAACTATGCACAAAGCTATGGATGGTGTGGAGAACTTTGAATATTATTCACCAACATCATTACTCAAGAAACTGAATGAGGATCAGATAAAAcgAGTTCCTCCGGTGGCTCTGCTCCATGGAACCAATGACATCATCGTTCCGGTGGAATCATCAGTGAAATTCTCCGAGCTCCTCAAAGCCCTTTCTATCAGGATGTCTCTCTATCTAATACCTAAAATGAACCACGCAGAGATAGTCACCGACCTTATGGCTCCAGACAGGCACTTTTACCATACTGTTTATGGCTGTATTATACAGGAGTACAGTAAATTTCAAGGTTATgctgaataatttttttcattcattgctAATATCATTTTTCCATTATGTCAGACAGTCATTGTTCTTTGTGTAATTACATTCACGTTTTAATGACTtcagaattgtttttattttcaatcagAAATATGTTCAATAACCCATTATACAAGATGGCAGGATCAGAGAAAACAACCTCTGTGCTTGTTAATAAATTCTGtacatgtttaaatgtaatagataaagaataaataaatacaaatatgtattgtgtttaaatataacatGGATGGATGAATTCTTACTTTGCATTTGTATaagtaattttttctttaatatgtgTCCTAATTAcggaattatttttgttgcataTTCACTGTTCACCGCATATTAAACAACATAAGctta

Function

symbol description
si:dkey-193c22.1 Predicted to enable hydrolase activity. Predicted to be located in membrane. Predicted to be integral component of membrane.

NR:

description
PREDICTED: probable isoprenylcysteine alpha-carbonyl methylesterase ICMEL2 isoform X1

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016787 hydrolase activity molecular_function

KEGG:

id description
K15889 PCME; prenylcysteine alpha-carboxyl methylesterase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240090.1 True 1596 mRNA 0.38 9 14876022 14880073

Neighbor

gene id symbol gene type direction distance location
wdfy3 wdfy3,LOC107681281 coding downstream 545 14812557 ~ 14875477 (-)
cds1 cds1,LOC107602031,LOC107663388,LOC107744867 coding downstream 65777 14795349 ~ 14810245 (-)
rasgef1ba rasgef1ba,rasgef1b,LOC107599189,LOC107663389,LOC107744864,LOC107746854 coding downstream 97763 14718524 ~ 14778259 (-)
prkg2 prkg2,LOC107746786,LOC107599184,LOC107744862,LOC107602032 coding downstream 158692 14706377 ~ 14717330 (-)
antxr2a antxr2,antxr2a,LOC107663391,LOC107746853,LOC107661223,LOC107602005,LOC107744869 coding downstream 259144 14573555 ~ 14616878 (-)
snx18a snx18,snx18a,LOC107599175,LOC107661231,LOC107746794,LOC107744868,LOC107602026 coding upstream 26511 14906584 ~ 14917764 (-)
hspb3 hspb3,LOC107746796,LOC107599178,LOC107744878,LOC107602000 coding upstream 38853 14918926 ~ 14919939 (-)
fsta fst,fsta,LOC107746798,LOC107599173,LOC107708632,LOC107602023,LOC107661233 coding upstream 136826 15016899 ~ 15023456 (-)
isl1a isl1,LOC107661270,LOC107708623,LOC107599171,LOC107602011 coding upstream 241923 15121996 ~ 15128172 (-)
parp8 parp8,LOC107746800,LOC107661236,LOC107708633 coding upstream 294315 15174388 ~ 15199837 (-)
G36696 NA non-coding downstream 177069 14698736 ~ 14698953 (-)
G36631 NA non-coding downstream 223629 14652095 ~ 14652393 (-)
G36602 NA non-coding downstream 387294 14485814 ~ 14488728 (-)
LOC122344807 NA non-coding downstream 408245 14464304 ~ 14467777 (-)
G36567 NA non-coding downstream 526086 14349108 ~ 14349936 (-)
G36708 NA non-coding upstream 792 14880865 ~ 14881065 (-)
G36714 NA non-coding upstream 25312 14905385 ~ 14905621 (-)
G36811 NA non-coding upstream 288974 15169047 ~ 15169358 (-)
G36967 NA non-coding upstream 681649 15561722 ~ 15562078 (-)
G36968 NA non-coding upstream 682075 15562148 ~ 15562363 (-)
LOC122345141 LOC107752369,LOC107661250,LOC107567461 other downstream 573641 14292063 ~ 14302381 (-)
znhit1 znhit1,LOC107752359,LOC107661214,LOC106567874 other downstream 593402 14279674 ~ 14282620 (-)
rnf214 LOC107663407,LOC107746393,LOC107599207,LOC107596114,LOC107734124,LOC107661199,LOC107599223 other downstream 819317 14040982 ~ 14056705 (-)
tmprss13b LOC107746439,LOC107663381,LOC107599230 other downstream 866486 14001934 ~ 14009536 (-)
LOC122345901 NA other downstream 1027952 13845403 ~ 13848070 (-)
pdzd2 pdzd2,LOC107746802,LOC107681406,LOC107661237 other upstream 325878 15205951 ~ 15264945 (-)
zfr zfr,LOC107746805,LOC107681158,LOC107552600,LOC107602019 other upstream 413783 15293856 ~ 15308440 (-)
npr3 LOC107681138,LOC107746807,LOC107552598,LOC107602007,LOC107708637,LOC107661273 other upstream 469943 15350016 ~ 15367413 (-)
alkbh2 alkbh2,LOC107746816,LOC107552593,LOC107676640 other upstream 687946 15568019 ~ 15578967 (-)
cenpv cenpv,LOC107718355,LOC107676655,LOC107746825,LOC107680877,LOC107553589,LOC107552586 other upstream 823460 15703533 ~ 15709430 (-)

Expression


Co-expression Network