cxcl11.8


Basic Information

Item Value
gene id cxcl11.8
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 14321528 ~ 14322697 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240101.1
aaaaaaagaaaaacaatcacCTCGGTGGCTAGACCTTGGGAGTATAAAATAGAGTTACTGAAATCCCATTAATCATAATATCATCCGTCTATAGATTGTACAcgatcaaaaacaaaatgaaaacagctgcagcttttatttttctcgTCTGTTGCATTGTTCTGGAGGTGAAAGGCTATACACTGCCTGGGAAGAGAAGATGCCTTTGTGCTGATAAAGGAGTGAATAAAATCTCTCCAAAGGCAATCCAGAAGGTTAAAATCATCCCTCCAAGTCCTTCATGTAAAAGACTGGAAATTCTTGTCACTCTTAAGAGAGGAGCAGGGCAGAAATGCCTGAATCCAGGGTCGGAAATAGCCAAGTATCTGCTGAAAGCCATTCAAGAAAAGCAGAACAAAAGCCCGTAGTGGGAATCAACCATAGAGCCGATGTCCTGATCCATGGACCAGTAACCAAATCTTTCGAAAAATCACCTGCTTTCAGCATGCATTCAAAAATTAAGTAGTTAAATGTAAGCACAGTGCTTTAATCGGAGCCACTTCTGCTTTGAACAATTTGTAATaactgtaattattaataatcttttttaattctctctctctctgaaacgTGTTCTGTTTAGTAAAAGCAGAGCATTTCTTAGAAGCGCTTAGCTCTAGAGGAAGTCTCACGTAGCTGCTTGTGGTTTAAATGCTACAGCAAACACAGAAAGAGCTTGCATTGAATTTCCTGTCCTACTGATTACTGCGCAGAATAAATCATTGTGAGTGCAATTACAACTCTGGTGCTGTGCCTGTTTATCGATCTTGTGTAAGTCCTCCGTTTGTGTGATGAATAAAGGCGATCTCAGTAGgctttgcatttttaa
>XM_043240102.1
aaagaaaaacaatcacCTCGGTGGCTAGACCTTGGGAGTATAAAATAGAGTTACTGAAATCCCATTAATCATAATATCATCCGTCTATAGATTGTACAcgatcaaaaacaaaatgaaaacagctgcagcttttatttttctcgTCTGTTGCATTGTTCTGGAGGTGAAAGGCTATACACTGCCTGGGAAGAGAAGATGCCTTTGTGCTGATAAAGGAGTGAATAAAATCTCTCCAAAGGCAATCCAGAAGGTTAAAATCATCCCTCCAAGTCCTTCATGTAAAAGACTGGAAATTCTTGTCACTCTTAAGAGAGGAGCAGGGCAGAAATGCCTGAATCCAGGGTCGGAAATAGCCAAGTATCTGCTGAAAGCCATTCAAGAAAAGAACAAAAGCCCGTAGTGGGAATCAACCATAGAGCCGATGTCCTGATCCATGGACCAGTAACCAAATCTTTCGAAAAATCACCTGCTTTCAGCATGCATTCAAAAATTAAGTAGTTAAATGTAAGCACAGTGCTTTAATCGGAGCCACTTCTGCTTTGAACAATTTGTAATaactgtaattattaataatcttttttaattctctctctctctgaaacgTGTTCTGTTTAGTAAAAGCAGAGCATTTCTTAGAAGCGCTTAGCTCTAGAGGAAGTCTCACGTAGCTGCTTGTGGTTTAAATGCTACAGCAAACACAGAAAGAGCTTGCATTGAATTTCCTGTCCTACTGATTACTGCGCAGAATAAATCATTGTGAGTGCAATTACAACTCTGGTGCTGTGCCTGTTTATCGATCTTGTGTAAGTCCTCCGTTTGTGTGATGAATAAAGGCGATCTCAGTAGgctttgcatttttaa

Function

GO:

id name namespace
GO:0006955 immune response biological_process
GO:0032496 response to lipopolysaccharide biological_process
GO:0005576 extracellular region cellular_component
GO:0008009 chemokine activity molecular_function

KEGG:

id description
K12672 CXCL11, I-TAC; C-X-C motif chemokine 11

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240101.1 True 868 mRNA 0.39 4 14321528 14322697
XM_043240102.1 False 861 mRNA 0.39 4 14321532 14322697

Neighbor

gene id symbol gene type direction distance location
LOC122345144 NA coding upstream 605 14315699 ~ 14320923 (+)
LOC122345143 NA coding upstream 6927 14311644 ~ 14314601 (+)
LOC122345145 NA coding upstream 11452 14306837 ~ 14310076 (+)
si:ch211-271e10.2 NA coding upstream 34088 14283080 ~ 14287440 (+)
mogat3b mogat3,LOC107746411,LOC107663414,LOC107661213,LOC107752358,LOC107596103 coding upstream 41239 14276095 ~ 14280289 (+)
LOC122344908 LOC107599196,LOC107663386 coding downstream 1646 14324343 ~ 14326767 (+)
fras1 fras1,LOC107663364,LOC107661219,LOC107752371,LOC107746850 coding downstream 62970 14385667 ~ 14455284 (+)
LOC122345512 LOC107752366,LOC107661220,LOC107663395,LOC107599216,LOC107663363,LOC107746851 coding downstream 132720 14455417 ~ 14458914 (+)
LOC122345511 LOC107663395,LOC107599216,LOC107567471,LOC107752366,LOC107752365,LOC107661220 coding downstream 136757 14459454 ~ 14463721 (+)
bmp2k bmp2k,LOC107752364,LOC107746780,LOC107599185,LOC107661221 coding downstream 143811 14466508 ~ 14493471 (+)
G36420 LOC107663407,LOC107599223,LOC107746393,LOC107661199 non-coding upstream 274034 14046777 ~ 14047494 (+)
G36408 LOC107746439,LOC107663381,LOC107599230 non-coding upstream 314126 14005771 ~ 14007402 (+)
G36406 NA non-coding upstream 317997 14000526 ~ 14003531 (+)
G36405 NA non-coding upstream 321191 13999100 ~ 14000337 (+)
G36332 NA non-coding upstream 346769 13974532 ~ 13974759 (+)
G36507 LOC107663397,LOC107567468,LOC107599188,LOC107746779 non-coding downstream 19226 14341923 ~ 14342507 (+)
G36509 LOC107567468,LOC107752360,LOC107661217 non-coding downstream 20467 14343164 ~ 14343769 (+)
G36510 NA non-coding downstream 23187 14345884 ~ 14346835 (+)
G36573 NA non-coding downstream 143202 14465899 ~ 14466241 (+)
G36570 NA non-coding downstream 170851 14493548 ~ 14528933 (+)
LOC122345142 NA other upstream 16224 14300043 ~ 14305304 (+)
G36495 NA other upstream 29028 14290420 ~ 14292500 (+)
ins ins,LOC107596207 other upstream 335822 13984097 ~ 13985706 (+)
LOC122346073 LOC107654625,LOC107597279,LOC107741224,LOC107696048,LOC107727161 other upstream 1514177 12803789 ~ 12807351 (+)
iscu si:ch211-191d15.2,iscu,LOC107597282,LOC104937683 other upstream 1616283 12703352 ~ 12705245 (+)
LOC122345214 NA other downstream 10326 14333023 ~ 14337765 (+)
mrpl1 LOC107663378,LOC107746869,LOC107752362,LOC107599195 other downstream 24865 14347562 ~ 14349991 (+)
fgf5 fgf5,LOC107599194,LOC107746784,LOC107663393,LOC107661278,LOC107602014,LOC107744874 other downstream 323248 14645945 ~ 14652911 (+)
G36640 NA other downstream 395835 14718532 ~ 14720487 (+)
LOC122345998 LOC107718355,LOC107676655,LOC107746825,LOC107680877,LOC107553589,LOC107552586 other downstream 2069100 16391797 ~ 16395562 (+)

Expression


Co-expression Network