CI01000004_16695941_16729500


Basic Information

Item Value
gene id CI01000004_16695941_16729500
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 16695633 ~ 16729719 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_16695941_16729500.mRNA
ATATAAAATTCGCCAGCGTAGTATTTATACAGGGCGTGAATAAATGCCTTATCATAGGTCAAGATTAATTGCTCGGGGAGTGACGTAGCAGCCTGATCCTGGGGGTTTAACTCGCGCAACGCGCAGACACACAGACCGCGTTACCTCGTGCGCTCGGACCGCGTCTCGCGCTGCTGGGAGTTCACTAGCGAGACTTCAGTTCCCCGTCGCTCAAGGACAGATAAAGCGAGAGAGTGGTGTCTTTTCTTTTTTAGATTAACAGAGGAAGAATTAGGTCATCGCATTCTGTTCGAAGTGTTGGGCTCATCATGAAGATGTGCGTGATAACAGCGATGCTTTTCCTGGTGCTCTCCGGGCAGTGCGGCATCCTGGCTGGGAAAGCTGAAAGAAAAACAGCCATTTCTACGCTGCAAACTAATGGCCATTTGATCTCCTTCATTCAACTGGCTAGGATCGAACGCTGTGCCGATCTGATACCAACAGAGCCTATTTTAATTGAGTTGTTGGTGGATATTCTTGTAACACGCTGGGGAAATGCAAGACGCAGGTGGAAAAGCGCAGCGTCGGGGCGCGTGGCTCCTGATCTTTTCTCTCGCTTACGCAAACACGCGCGCGGTGACTGTTGGGACTCAAACGGAGATAATGTGAATTCACTTTGCTGGGTAGTTTTAATTACACCCAGGATCTGCACACATCAGCGTAAAATATTAATGCAGAGTCGGAGGCTGTCTGCGAGCAGTCCCACTTCAGTGGCAAGCGGTGCCACCCTGCGAGAACGGAGGAAGTGGAAGCTTGTCCACATGAAAGCAGTTATTAATTTTCATGTTTTTGTAGGAGTAATAAGAGGGTTTTTAGAAAGATCTCAGCCAGGGTTCAAAATTAACAGGCATCAATCTGAGTCATTATCTCTCCAAAACCCCTCTTTCCTCCGCCTCCTCTCTACCCTCTCAGCGAGAGCGCGGCGCACTAGACTCACGGGGAAAAGGAGCACAGGCCTAATTGGATTTGGGAGCAATCTGTCGCCTCGCCTTTCTCTTTCGGATCACACATACAATCGCAGTGGCAATGGACGTGCTCTCCAGCATATTTCAGTCTGTTTTGATGTCTTGCTGGGCTCTCCACTCCCTGCAACTAGACTGGAGCTGATCTGTGAATGTGTTTATCTCCGCTTGACCCTGCCTCTCCAGAAGATATTTGTCCTACGCTGCTCACACCTTCCCTTGACCTTGGCTGCCGCGACCATTAATTACGTGGCCCGTGCCGCAATCAACTTTCGCATCAGCACTTAGACAAAGGACACACGCATGCCGAGATAAACAGAGCCGTTCGCTTCGCTCTCCTCGCTGGGTCAAATGCCCATTTAAAACATCTGAAGCAGCTCATTACCTACAAAGTGCTGTGTTTTGGGTGGGCATAGATACTCGCCACTTAACCCATTATGAATTGTTTTCAAATTATCCAACCATTTATTATGCTGCCAAGCAGCCTGTGAAGACAACTGCATCATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_16695941_16729500.mRNA True 1508 mRNA 0.49 8 16695633 16729719

Neighbor

gene id symbol gene type direction distance location
CI01000004_16649360_16654303 NA coding upstream 41280 16649171 ~ 16654353 (+)
CI01000004_16579927_16586961 NA coding upstream 108436 16579927 ~ 16587197 (+)
CI01000004_16567132_16570668 NA coding upstream 124265 16567132 ~ 16571368 (+)
CI01000004_16490931_16555397 CARMIL3, LRRC16B coding upstream 139640 16490931 ~ 16555993 (+)
CI01000004_16467711_16471121 NA coding upstream 224126 16467711 ~ 16471507 (+)
CI01000004_16812706_16814956 NA coding downstream 82987 16812706 ~ 16815068 (+)
CI01000004_16869205_16944944 CLSTN2 coding downstream 139486 16869205 ~ 16944944 (+)
CI01000004_17062704_17110319 CRHR2.S, CRHR2 coding downstream 332985 17062704 ~ 17110319 (+)
CI01000004_17214619_17236647 PTH1R, PTH1RA coding downstream 484900 17214619 ~ 17236674 (+)
CI01000004_17320843_17323478 NA coding downstream 590773 17320492 ~ 17323777 (+)
G34362 NA non-coding upstream 20819 16674505 ~ 16674814 (+)
G34361 NA non-coding upstream 21332 16673921 ~ 16674301 (+)
G34359 NA non-coding upstream 22866 16672544 ~ 16672767 (+)
G34357 NA non-coding upstream 23199 16665580 ~ 16672434 (+)
G34277 NA non-coding upstream 49411 16641342 ~ 16646222 (+)
G34391 NA non-coding downstream 198755 16928474 ~ 16956174 (+)
G34399 NA non-coding downstream 221152 16950871 ~ 16952619 (+)
G34400 NA non-coding downstream 242276 16971995 ~ 17025976 (+)
G34427 NA non-coding downstream 321844 17051563 ~ 17052535 (+)
G34437 NA non-coding downstream 391736 17121455 ~ 17129497 (+)
G33815 NA other upstream 629169 16063415 ~ 16066464 (+)
G34220 NA other upstream 755683 15939357 ~ 15939950 (+)
CI01000004_15091390_15096502 GA45B, GADD45B, GADD45BB other upstream 1603664 15091200 ~ 15097173 (+)
CI01000004_14036114_14036449 KIAA0040 other upstream 2658733 14035393 ~ 14039142 (+)
CI01000004_12646972_12652534 NA other upstream 4039922 12646838 ~ 12652570 (+)

Expression


Co-expression Network