eda2r (LOC107598184)


Basic Information

Item Value
gene id eda2r
gene name LOC107598184
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 12943325 ~ 12954845 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240166.1
AATGTGTCAGCTTAGCGGACTTCGCTCGCGCATCTTTATTTTCTTCGGAGGCAGCGGCTTTCAGTCGCGGCAGGGAGAACATGTCGGGACATGCCCGCGTCCCCGCGCGCGGCGAGCTGTGGCGCACCGGGGCGAACGTGCCACTCAACAACTTCAACCACGAGCTAAACTGGACCGAATTTACCCCAAGCCACAGGAGACGGTTGCTTTAATAGGACAGAGAATTAAGTGACTGCTGCGATTTGCCCCCGCTGCAATaTATGGAATGGATTGCTTGATGGATGAGTATCACCACAATGGACAATGTCACAAGTGCTCACAGTGCCCACCTGGCCTAGAACTGAAAgagGACTGCGGTTACGGTGCAGGTGCGTCAGCGGTGTGTGGTGTTTGTGAAGTTCGGTGGTTTAAGGAAGACTGGGGATCTCACCCATGCTCACTGTGCCAGAACTGCCGCAGACTCAACAGACAGCAAATCAAGCACTGCACAGCCACAGACAATGCCGTGTGCGGAAACTGCCTCCCTGGattcTACAGCAAAATGCGGCTGGATGGATTAGAAGATTTGGAATGTCTTCCGTGTGGCCCTGCCTCCTTCAGAAACATACAGTGTAGCGGAGGAAAAAGCATTGGAGCAGCTAAAGTCCAGACCTTAGCAGCTCCGATACAAAATGCGTTCTCCATAGTGACCGCTTGTGTAGCAACAGCTGTATTAACGACCATGCTATTTGCCATTGTGTGTGTCACCTACCAGACACGGTCTTCACTCAGGAAAACATGCAAAcGTTGTTTATCACCGGTCAGCAATGGTCACACTGACAGTGATGCAGCTTCGGTTCCCATGACAACCCTGCACACAGTGATGCGGGATGAAGAAGTGGACACATCAAATCCTTGCCTGCTAGTGAAGGACCCCTGCACACTTGATGACGCCACTACCACCACGATGACCTCTGATCTTTGCCTGCATGGGTCTGAGGTTCTTCCTCCAGTGCGAAGCTCAGCCTGCACGGATCCTGCAAGGGGAGTCATCACGCAGGCAACAGAAACACCCGAAGTTTCGGACTCCAGCCTTTCTAGCCAGCATGTGATTCTCACTCTGGTAGGAGGACAATCTATAGTGAAGCCCTTCTGTGCCGTAGAGCAGCGCACAGCCTGGGGGCTTCATGCTCCGGTAGAGTGCACTGAACTGGACCTTCAGTATCTCTCCAACACCCTGGAGCTCCAGACTTTCATCCCAAAGACTATCCCACAGTGCCCCCAGGCCTGATGCTGCAGGACCTGGAGAGAAGAGAGGAAGTGGAATAGGAGATGGTTAACATGAGAAGAGATCACAGCTGCAAAGGTATGATCATGGTAATGAGATACTCAAAGAGACAACAGACACACTTAGTACAAACTAGTAATTGATGCTAAAAAGTGTGTTACTGTAGTTGTTTGAGGTTTCTGCAATGTGAAAAATAGGTGGCTATGAGCACAAAGGGGCATTAATATGATAGAGGCATTTGGTGGAGTACACTGATTAAGAACATTGTGGGAAGTCCTTAATACTTATGTACTGAAGTCACAATGAACAGATTTTCTACTTAAATTGTTGACATCTGAGTGAACTggataatcaaaaaaaaattgaaagtgtAACAGCTGGAAGGACATAAGGTGGAATAAATGATAACTGAATTCTCATTTTGTGCAAACTACACCACCGTTTCAAAAGTTTGTGAGTTTTCTGGATTCAGCAaagggtgcattaaattgatgaaaagcgtcagtaaagacatttctaataatttattttaaatctattttaataatgctagcAAACCTGGAATAATGCTTACATTCAGAATACATGTACTTAGCAGCGTAActgctttcaacattgataataataagagcTGTATCTTGAAcactaaatcagcataataGTTTTTTGACATCacaggaatatttttttaaatatataaaaatagaaagcagtcattttaattgtaataatctcACAAtaagttttactgtatttttcatcaaataaatactgcCTTTATGAACATAAAAGATGTCTTTCCGAAAACACAAACTTCTGAACACGAGTGTGCCCCTTTAAATTTTGTGGAGTATGTCTCTACTCAATATAAGCTCATCTGTTATCTAAAGTCAAAGCCCAAGAAATGGATAATATCATCCCGAAGATGAAAACTTGCAGGTCATGTTCTTCTTTGATCTAAACATGGTTATTTTAATTGCTCCTTACAACAGCTATGCCAGATTACCAGTTTATGAAGAGTAAGCTTGATTTTACTAATCACTGGATTTATTACTACAATTACTGATGACAGCCTCATAGTACCtgatttactgtttattttactgCGAAACTTGACTAAACAGTAGTACGCTGCCAAAGCAAACCAAACTGACTTATTCCTAAGCACATTACTAGACTTTGGCAATGTACTTCCAATAAAACCaagcaaaacatgaaaaagtattaatttattgtagctacattacattttactgaCAGCCTGTGTAGGAAAAATGATGACTGGGAAAGGAAATTCTGGCCATCAAAGGTTGTTGTGTGAACTCGTGTTTGCTTTACAAGTAATTACAATGGTGCTTgtgaatgcttgaatctgattggttgatgaaTATTCAGTTAGTCCCATTGTTTTCAGGGAAACGTCCGGCTAAACTAGTTCCAGGCAGGACTCGGCCACATTGCATGTCCATATCACTCCGCCAAATGATTTTGGTTATATGAAAAGACCCTACAATTGATAAAAGCAAGAGAACCAAGACCCACAatgacactgtaaaaaataaatatagtaaacaaaataaaactgccttcttttattatgtaaagaatATCCGTATTTCACCCcaagcgcacacacatacagtgcaGACATTATTAAATACAGTCATAAAGCATATGCGAAATTGTCTGTTGTCAATTATTCCCTCTTATCCTATGCCTCAAAGTCCTACCTGTGGCTGAGTGGATTAACAAAATTAGTTAACAAAAAAGGGATCATGTCACGGCACGCTGTATTGTGACATTGCCTTCGATAAAGCTTGACCTTATTGTAATGCCAAATGGGTTTCATTTAAATTGGTAAGTTGTTGTTCGGCTGTCTTAAATTTAGagataaagatttttttgaagtgttaaatgCATCTCTCCAACACTTTCATAGCATCTTTAGCCTGTTAGTGCTGCAGGGAACCACTTAACGTATGCCATAAATGCACTGcaaagaaagacatgaaaaatataatttaagttcaaaaacacatgcattgcAGTTGTTTGAAGAAGACTGCAGTTAGTCACCTGAGGAGGGAGatctattgtaaataaaatagttatggTGTGGCCTGATGCCAGCACAGTCAGCTGGTGTGTCTGTGAACacacaaagatgtttttgaGGTGGTTTGTGGACAGATCCAGGGGGCATGCCCTAGATACTACAAAAACTGTACAATTATATAGTACTGCAGTGAATTTTCGCCTTTGCTCAGTCCAAGGGTGGTTTTATATGCCGTATGTGTGTCCCTCAGAATGGCAATGGCATCAAGCATCATTAGTAGGTGTTGGGTTCATTTCATTGAGAGCTCACACCAGATCATTCCTAATCGCCTGCAAGAAAGACTATTAAAAAGTGCAAATGCACCACACTTTCCAGAAGACATTTCCTGAAACAGTCCCGTTATGTACAGTACTTCAGGTTTTagcttgaaaatgtaaaataatgtaatacaatggtgatcattctaaaatgaaaaGTCAGACATTCTTCTCCCATTTTATtctggtaaaagaaaaaaaaagactttttttagaCTTATTTCCTGAGTAGTTTCAGAGTTGGCATTTTAAGTTGCTGGGAATGAGGCATAGCAATGACCTCTACAAAATGGACCTCATCCAAAAAGGCATTTAAAGCAATTGTTCCACTTTTCGCACCTTCGATAAATAttgcttttcatttataaagctaatttaaaagcttgaacattttaacattaatacgtgactttttttctactgtaaaattgtgctgttttcttttctgtatatattagatatttgtAGCCAACGTTTTTTGTACATCTGCCTGCATTTACACATCTGACTGAGTCGTGTTAAAaaccactatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatattcagagttctattgtatttacaaaaattcTCATCAGTATAAAGTGTGGGATACTGTGTTGTATTGTAGTAACAGTacgattttttttcagtttatgttGAATATGTTCTTATTCAATGAATTAGGAACagtattttggggtgaaatgcaATGATACTATTATTGTCGCTGTTGTTTTGTTCAGTATGTgtcaaataaatagtttttctactttt

Function

NR:

description
uncharacterized protein LOC110537287 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240166.1 True 4446 mRNA 0.40 7 12943325 12954845

Neighbor

gene id symbol gene type direction distance location
ttc33 ttc33,LOC107596169,LOC107757511,LOC107655901 coding downstream 31562 12894584 ~ 12911763 (-)
map1b map1b,LOC107596172,LOC107655889,LOC107757527,LOC107597920 coding downstream 79627 12844251 ~ 12863698 (-)
ptcd2 ptcd2,LOC107718650,LOC107700924,LOC107655927,LOC107757526 coding downstream 102389 12835956 ~ 12840936 (-)
isg15 LOC107654605,LOC107597356,LOC107741227,LOC107595933 coding downstream 110587 12831666 ~ 12832738 (-)
svopa svop,svopa,LOC107696058 coding downstream 123647 12808510 ~ 12819678 (-)
ophn1 ophn1,LOC107700916,LOC107596712,LOC107596162,LOC107655920,LOC107757505 coding upstream 65501 13020346 ~ 13050778 (-)
rxfp2l rxfp2l,LOC107655900,LOC107700901,LOC107596199,LOC107757506 coding upstream 163522 13118367 ~ 13150538 (-)
efnb1 efnb1,LOC107746350,LOC107700912,LOC107548494,LOC107596159,LOC107757535,LOC107655917 coding upstream 315557 13270402 ~ 13303696 (-)
trnap-agg_13 NA coding upstream 420784 13375629 ~ 13375700 (-)
zgc:158432 NA coding upstream 433167 13388012 ~ 13391957 (-)
G36012 NA non-coding downstream 9546 12933471 ~ 12933779 (-)
G36009 NA non-coding downstream 16863 12924743 ~ 12926462 (-)
G36004 fbp1b,LOC107718665,LOC107655925,LOC107596168,LOC107757529,LOC107596723 non-coding downstream 26511 12913626 ~ 12916814 (-)
LOC122345905 NA non-coding downstream 59168 12880061 ~ 12884157 (-)
G35966 wscd2,LOC107597274,LOC107743343,LOC107696066,LOC107595945 non-coding downstream 303948 12637190 ~ 12639377 (-)
G36048 NA non-coding upstream 100724 13055569 ~ 13056705 (-)
G36063 NA non-coding upstream 153854 13108699 ~ 13108948 (-)
G36104 NA non-coding upstream 362390 13317235 ~ 13317462 (-)
G36108 NA non-coding upstream 368086 13322931 ~ 13323222 (-)
G36200 eda,LOC107757537,LOC107700911 non-coding upstream 415365 13370210 ~ 13373755 (-)
G35936 NA other downstream 437367 12501914 ~ 12505958 (-)
G35825 tenm1,LOC107557119,LOC107713050,LOC107597323,LOC107741271 other downstream 623640 12317803 ~ 12319685 (-)
sh2d1aa sh2d1aa,LOC107713049,LOC107741293,LOC107663232,LOC107557102 other downstream 773915 12165403 ~ 12169410 (-)
msna msna,msn,moes,LOC107746233,LOC107597256,LOC107672695,LOC107663223,LOC107741191 other downstream 1127381 11795656 ~ 11815944 (-)
G35554 LOC100304549,LOC100219516,LOC106514001,LOC103353280 other downstream 1290698 11583780 ~ 11652627 (-)
G36047 NA other upstream 98999 13053844 ~ 13054857 (-)
h3f3c h3f3b,H3F3A,LOC101073377,LOC105909691,LOC107388308,LOC105888650 other upstream 624216 13579061 ~ 13582290 (-)
lrch2 lrch2,LOC107700248,LOC107746375,LOC107710563 other upstream 699449 13654294 ~ 13699226 (-)
G36298 NA other upstream 762279 13717124 ~ 13718543 (-)
G36336 NA other upstream 862897 13817742 ~ 13818942 (-)

Expression


Co-expression Network