XLOC_000699



Basic Information


Item Value
gene id XLOC_000699
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 53864528 ~ 53865837 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00003175
CTTTTGtaatcagggtttctacagatttatcaagtcaaatttaaaacttaagacctttttaagaccatcaagAATAATATTTCAGATCTACACAAAGCTAAACAATTAAGATTTTTTAATGGCCAAGTTAAAACATTGAATgttgaaaaaatagcttaaaggggctaatatatttTCAGAAGAATACTTTATATCCATTTGTAATTCATTTTTTTCACAGCAGAAATGGGAAGTTTTACAacaacaaatgtattttatattttaggacAGGAGTTCCTCATGATCAGATAATCATATTCTGTGGTCTACggcataaataaaaaaggaaaactcCTGTATTAAACAACCTTTATCTGTTGCTTTTGAATGATCTTCAAGCTTGTATGAAACATGTTCAGGTTTACTTTAGTCTCAGAAACGTATAATTACTGTACTTCCAGCTTGATGCAAGCAGATCACTATGTAGCATCACATGTGCACTCCATGACAATAACAGGAAGTTATCTCAGGTCAAAGATGTTTTATTGTATAAATCCATGAACTTTGAAGAACAGATGCGTGTCATGATGTTAATAAACTAAAGCCATACAGT

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00003175 True 592 lncRNA 0.31 2 53864528 53865837

Neighbor


gene id symbol gene type direction distance location
XLOC_000698 ifngr1 coding upstream 1220 53842344 ~ 53863308 (+)
XLOC_000697 NA coding upstream 93789 53760797 ~ 53770739 (+)
XLOC_000696 pus10 coding upstream 133992 53714734 ~ 53730536 (+)
XLOC_000695 NA coding upstream 168973 53688977 ~ 53695555 (+)
XLOC_000694 NA coding upstream 206239 53656231 ~ 53658289 (+)
XLOC_000700 nup133 coding downstream 53273 53919110 ~ 53941906 (+)
XLOC_000701 acta1a coding downstream 80097 53945934 ~ 53953532 (+)
XLOC_000702 ccsapa coding downstream 88393 53954230 ~ 53963933 (+)
XLOC_000703 NA coding downstream 116777 53982614 ~ 53988776 (+)
XLOC_000704 dla coding downstream 147620 54013457 ~ 54026352 (+)
XLOC_000692 NA non-coding upstream 353905 53508505 ~ 53510623 (+)
XLOC_000691 NA non-coding upstream 373223 53490099 ~ 53491305 (+)
XLOC_000710 CABZ01067150.1 non-coding downstream 320202 54186039 ~ 54186156 (+)
XLOC_000712 NA non-coding downstream 411406 54277243 ~ 54469289 (+)
XLOC_000713 NA non-coding downstream 536096 54401933 ~ 54404147 (+)
XLOC_000715 NA non-coding downstream 746001 54611838 ~ 54613479 (+)

Expression



Co-expression Network