LOC122345752 (bri3bp,LOC107684981,LOC107597359,LOC107672602,LOC107595913)


Basic Information

Item Value
gene id LOC122345752
gene name bri3bp,LOC107684981,LOC107597359,LOC107672602,LOC107595913
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 5383555 ~ 5388325 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240187.1
CCGGTACCGCGGACTGTTGCAGTCTGCTGTAGTCGCGCGCAGCGTCTTCTTCCGGCACATCAGACCTCCTTATTTAACCTACAATAAAGCTCTATTCGCCCGCTGCGTCCACAATTTTTCTCCATTGCACATCACCGGTCGCCAGGTCGTCTGCGAGGATGAAGGGAGCGAAATTGGTCGTGCTTTTCAGCGTGTTTTTGACCTTCGTCCTCCTGACTGAGGCGGCGCGAAGCAGGAGAGACTCCAGCAGCCAGAACAGCTTCAGGAGGGCGGCCAGTGGCTTCTACCAAACCCTCAGCAATATCTTCGGAGAGGAGAACATCAGGGCTCTGTACAAGTTCTTCTCAAAAACTACAGATAAGTTTGTTCACGGAGTCGATTCGTTATTGGACACCTTGTGGAAGCTGTGGGTGGATCTGCTTGATGTTATGGGCATCGACTCCTCTAACCTGACGCACTACTTCAGCCCATCGTCTGTGTCCAGTTCCCCTGCTCGTGCGCTCCTCCTGGTGGCGGCCCTGCTGGTGGCTTACTGGTTCCTGTCCTTGTTCCTGAGCGGCTTTTTTTACGTCCTCCACGCAGTCTTCGGCCGCTTCTTCTGGCTGGCCCGAGTGGCCCTTTTCGCCCTCTCCTGCCTGTATATCCTGCAGAAATTCGAGGGCGACCCGGAGAAAGCGGTGCTGCCGCTGTGCTTCATCATGGCCGTGTACTTCATGACGGGGCCGGTGGGAGCGTACTGGCGGAAAGGGGGCGGACCTGGAACCCTGGAGGAGAAGATCGACCACCTCGACACCCAGATCCGCCTCCTCAACATCCGCTTGAGCAGAGTGATTGAAAACCTCGAGCGCTCCAGTGACCAATGAAATGATTTTCACCCCAGGCTGAGGGTCAGAGCTGGGGTTTGTGAGGCGTgataagtattttattattattttttttaattaaaccttTCTTTTGCTCCTTTTTTTCTCAGGATGTCCCAACATTTTAGTCGAAAATTGTACGTGACGTGTTCGGAAATTCGATGAATTCCCCAGGCGATGCGCTGAAGATCGTCTATTAGGTTCACCCTGTTGTTGTGGAATGTATCGTTAGTGTCCACCTCTACTGTAGCCGCCCGTTTTTGAGTAAATATCAGGACTTTTTTGTATACTGTGTGTCCGTCTGCAAGCCTCGAGCCGAGTGTGTTAGTCCATTGCGCAGTATTATGCGTCCATAAGCTTTGTTAAGGGAACTTTCTATgtgttatttaataatcatgTAGACGATGCAATTGAGAAACACTCAGAAAGTGTGAAGAATAGTCAATGTCActgcatttttgttattatttattttttcctcccaTCTCCGTCTCTTCTCGAGGTCACCAGAGGTCACTCTGAGTTCAGGACCGATCAGCACTATCAGGGATAGAGATGTATGTGGAAATCTCGTTCAGAAAGCAGCTAGTCATCAGAAGCGTGAGGATATCAGACCAGTGTTCCTGGCAGCAAAGTAACAGTGCTGCAATGCACACCGGTATCTCAGTTTcagccgagagagagagagagagtacattCAGGGTAATACCTGGTCATGCACTTTGCTCTCAGCATGACGTCATCGTATTAATTGCATGCATCGTTTTAATGCACTTAGAAAGGGATcgattaaatacagttttaatcctGCTACTTATTAGTGCTGCTTAGTAAAATCGCTTATCGGGAAAGTGGCCTCCATGATTTCATCCACATTGGCGTTTGGTCGATTCGAAATGCCTGATAACTAATCTAAATCttctctgctcttttttttttttttttttttttttttactcattcgttttaaatttcattccacttttttgatttttagtTCGTTTTTGCAACCTCGTTGTAGCCAAAGctaatgtgcatgtttttaaaaaatatatatttcaaacatttattccCCGCTTCATGgatttttataaacacaaaaatactgtaatttaacatttttatacatgtttttacattttaagagaaATGTTATGAATGGCCAGTGTTTAAGTATATTTGCATTCCATAAAATacgctaattattattattattttttttatttatactgctGTATTTAACACTGCTGTTGAAAGGTTTGGAgccagtaagatttttaaatgacattaatatCGACATTCAGCCagtatgtattaaaaatgttattttaatatcttttaagctcgctgttcattaaagaatcttGATAAAACTATAACGGttctcacaaaaatatttagcagcacaactgttttcaactttaaatataatataaaatatttttgaatgatttccgaaggatcgtgtgaccaagcagttattttaaaaataaaaaaaaaagtttactggtcacatacttttgaacagtagtataaATTGGAGTTAAGTGCTTTTGttatacatttactgtatttattttgcgCCATATCCTATAAGGTTGTGTTTACGGTGAAATCAGTGTGCTATtcgtttgtatttgttttttttgtgatttttctgcTACTAAATGATCTTTTTCATATCTTTTGAAGATGTCTTTCATTCAAAGTGAGAGTTTTGTGGCGTTTTAGCCCTAGCGTCAGCGTCGATGCCATTCTATACTGTTTTTAGACATTGATGGAATTCACTTTTAGCGGATGCACGTTCGAAATTCGCGCTCTTTCTCTTCATGGAAAACGAGCCAAAAGTATTCACCCCTCTTCCTGCATCTCGCTGATTTTAATCCAGAAACTGTCCCTCATCGCCGTGACATACTGTAACTCAAGTCTACCGGAAAGCACTAATATCAAGAAggcccgttttttttttactgtgtgaaTGCGTGAAGGAAATGATACAACGTAAGCACCAGCCTTGAGGAATCTCCAAATATATTGTGTGCTTGCAATGCACCAGCGTTATTGTACAACCACCGGAGACGACCGATAACAATCACGCGCATACATTTCTCAGCAAACGCTCCTGTGTTTAAAATCGTCTCGTGAACGTCTGTAACGAATGAGAAGCCGCAGTACCTTTTTTGAGAGTTTTCTCATTGACTGTGATTTCAAGTGTACTCCGTGCAGAGTGAATGTGCTTGTAGAAATACGTATGGAGGTTTAGCAATTAATTTCGTTCTTGTAAGTTGCAGTAACAtgttaaatcattcatttatttgtggaatattgtgcatttcttattattgatGTCTGTTACATTATACGTAAGGCAGTACTGACTTAACTGCAGACTCTCATGAATCCCATTTGACTGCACCAGTGCCAATTATTGTGTGTTGATTGATCGATTTGTATTGGGAAAGCACTGAATCTTTGTGAAGTCTAGACCTTAACTGGTATTTTTTGCGTAGTAAAATGCCTTTTGTACAAAGGTTTGCTTTGTACTGTATAATTTCCATCAGGAGTGTTCACCCGCGATGTTGCTTGCCGTGGTATCTTTTGCGCTGTCtaacatatttttgtctttatgaaACTTGTTCAATGATTTTCTCGAAGATGAAACGGTTGTCcgaaaatgatttaataaacgTAATTTGACCAAC

Function

symbol description
bri3bp Predicted to be located in membrane and mitochondrion. Predicted to be integral component of membrane. Orthologous to human BRI3BP (BRI3 binding protein).

NR:

description
Bri3bp protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240187.1 True 3565 mRNA 0.41 3 5383555 5388325

Neighbor

gene id symbol gene type direction distance location
aacs aacs,LOC107672615,LOC108255473,LOC107684991 coding downstream 3286 5351446 ~ 5380269 (-)
si:dkey-215k6.1 si:dkey-215k6.1,LOC107684990,LOC107741256,LOC107672621,LOC107707847,LOC107548916,LOC107600130 coding downstream 50051 5169712 ~ 5333504 (-)
rnf215 rnf215,LOC107707831,LOC107656805,LOC107741259,LOC107672611,LOC107548928,LOC107600132 coding downstream 369614 5008086 ~ 5013941 (-)
zdhhc8b zdhhc8b,LOC107600124,LOC107672609,LOC107707819,LOC107741283,LOC107548914 coding downstream 382499 4949084 ~ 5001056 (-)
si:dkey-112e17.1 LOC107656819,LOC107548941,LOC107741260,LOC107672633,LOC107707820,LOC107600127 coding downstream 435602 4927327 ~ 4947953 (-)
poli poli coding upstream 494 5388819 ~ 5393629 (-)
ankle2 ankle2,LOC107597302,LOC107684979,LOC107672626,LOC107741250,LOC107595914,LOC107752143 coding upstream 10569 5398894 ~ 5410494 (-)
golga3 LOC107684982,LOC107595916,LOC107741281,LOC107672616 coding upstream 24344 5412669 ~ 5429468 (-)
ranbp1 ranbp1,LOC107684983,LOC107752129,LOC107597301,LOC107672632,LOC107741249 coding upstream 42241 5430566 ~ 5435131 (-)
LOC122346225 NA coding upstream 42939 5431264 ~ 5431394 (-)
LOC122345808 NA non-coding downstream 214306 5142578 ~ 5169249 (-)
G33334 NA non-coding downstream 307521 5075761 ~ 5076034 (-)
G33333 NA non-coding downstream 329652 5034111 ~ 5053903 (-)
G33332 NA non-coding downstream 349601 5032563 ~ 5033954 (-)
G33330 NA non-coding downstream 355740 5024945 ~ 5027815 (-)
LOC122344984 LOC107597340,LOC107752133,LOC107684988,LOC107672606 non-coding upstream 185839 5574164 ~ 5597629 (-)
LOC122344983 LOC107684988,LOC107597340,LOC107752133,LOC107741245,LOC107672606 non-coding upstream 199720 5588045 ~ 5595174 (-)
G33409 LOC107684993,LOC107597297,LOC106585658 non-coding upstream 213084 5601409 ~ 5602204 (-)
G33423 acacb,LOC107752147,LOC107654593 non-coding upstream 229940 5618265 ~ 5620705 (-)
G33434 NA non-coding upstream 265755 5654080 ~ 5654764 (-)
G33175 NA other downstream 760497 4622490 ~ 4623058 (-)
LOC122346168 srrm4,LOC107720865,LOC107702227,LOC107561260,LOC107656798 other downstream 1190474 4144856 ~ 4193081 (-)
piwil2 piwil2,LOC107560971,LOC107707823,LOC107702219 other downstream 1484977 3878650 ~ 3898578 (-)
coq5 coq5,LOC107560969,LOC107707852,LOC107656810,LOC107561264,LOC107702223,LOC107707851,LOC107560965,LOC101158254,LOC107755815,LOC107561265 other downstream 1630791 3744675 ~ 3752764 (-)
G32908 sema4c,LOC107697240,LOC107708238,LOC107699920 other downstream 2423378 2951462 ~ 2960177 (-)
G33758 LOC107596916,LOC107710760,LOC107700938,LOC107587412,LOC107693817 other upstream 1435846 6824171 ~ 6826182 (-)
usp20 usp20,LOC107691016,LOC107693839,LOC107710745 other upstream 1534521 6922846 ~ 6943203 (-)
G33998 LOC108444092 other upstream 1994021 7382346 ~ 7397153 (-)
LOC122345606 LOC107712378 other upstream 2318645 7706970 ~ 7711824 (-)
si:dkey-220k22.3 NA other upstream 2330240 7718565 ~ 7721758 (-)

Expression


Co-expression Network