thy1


Basic Information

Item Value
gene id thy1
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 8567082 ~ 8568987 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240225.1
AGTTTTTTTCTAATGACACGGCGCTATGCAGCCTATGGGCGTCAATCTCCTCTTACTTAATCACACGTCCCCGTCTTCCTCGAGTAATCGCTGAGGGACTTGCCTCGATAACGGACCGACGGCTCCGGCGTCTGAAAGCAGAGAAGGCGAGGTATATAAGCAGGATACTGTGGTCAAGATGATTTACTATACTGCCTTTGCTGCCTTTTTACTGCTGGgtCTTGCATCTGCCCAGTCTTCCCTACAGTTGTCGTCCTGTTTGACTAAAGACCAAAACCTGAACCTGTCCTGCAAGTTCACTCCATCTTCAGGCCCCAAGACCTGCTACTTCATGACAGAGAATAAGTTGGTTGGCTCTACCAACGCGAGCAGCGTCCCAGACAGCACCTTCAAAAACCGTGCCACTGTCAGTATCGTGGAAAATGTGTGTAACCTGAATTTGAACGGTTTCGCCGACGACAAACCCAAAAACTACACCTGTTACATCAAACAAACTTCAACCGCGTCTGCTTTTGTACTTGTGGACAAGAGTAAGCTTCAGACTTGTTCTGCCTGGTGTGTCATGCAACACAGTGGAGCAGCGCTCCTGCTAGCTTTTCTCACTTTCCCGTTGTTGGAGTTTCTCTGGGTCTAGATTTCTCTTGGTACAACGCCAATGCCTAAAACCCAAGTTATACGCCCTCCTGTTTTACATCAAAATAATCTGCAGGATTTGAGAGCTCATGCTGATACCAAATACACTGTCATGTGACGCACGTTCCtcaaatacaatgtaaaatgtacctttttaaatgtggcatttgtttttaaagtttaagtGAGCTCCCTGTTTAACATTGCTCTTAAGTatgaattataaaatgcaataaaggtTGTATTATGATTGTG

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240225.1 True 888 mRNA 0.45 4 8567082 8568987

Neighbor

gene id symbol gene type direction distance location
usf1l LOC107709708,LOC107681234 coding downstream 4 8561395 ~ 8567078 (-)
f11r.2 LOC107681233,LOC107722769,LOC107587332,LOC107598159,LOC107677439,LOC107709686,LOC107597734 coding downstream 17549 8546581 ~ 8549533 (-)
f11r.1 LOC107597734,LOC107722768,LOC107709707,LOC107677438,LOC107681232,LOC107587332 coding downstream 23697 8537692 ~ 8543385 (-)
ubash3ba ubash3ba,ubash3b,LOC107709710,LOC107597727,LOC107677436,LOC107722770,LOC108259961 coding downstream 30055 8511602 ~ 8537027 (-)
adamts15a adamts15a,LOC107681261,LOC107717868,LOC107722794,LOC107677442,LOC107587336 coding downstream 180688 8369572 ~ 8386394 (-)
si:ch211-215c18.3 si:ch211-215c18.3 coding upstream 862 8569849 ~ 8574583 (-)
ddx31 ddx31,LOC107597806,LOC107741444,LOC107587329,LOC107690663 coding upstream 25077 8594064 ~ 8609276 (-)
ak8 ak8,LOC107681224 coding upstream 42525 8611512 ~ 8631326 (-)
tsc1a LOC107709700,LOC107597815,LOC107681228,LOC107690665 coding upstream 63908 8632895 ~ 8643790 (-)
dpp7 dpp7,LOC107709692,LOC107560239 coding upstream 302293 8871280 ~ 8876498 (-)
G34401 NA non-coding downstream 91902 8474979 ~ 8475180 (-)
G34400 NA non-coding downstream 93733 8472323 ~ 8473349 (-)
G34396 NA non-coding downstream 99223 8467620 ~ 8467859 (-)
G34395 NA non-coding downstream 101696 8464788 ~ 8465386 (-)
G34392 NA non-coding downstream 103479 8463373 ~ 8463603 (-)
G34573 LOC107681240,LOC107587323,LOC107709680,LOC107757966,LOC107690673 non-coding upstream 319999 8888986 ~ 8890348 (-)
G34574 LOC107709680,LOC107560234,LOC107715750,LOC107690673,LOC107681240 non-coding upstream 336420 8905407 ~ 8905624 (-)
G34575 NA non-coding upstream 347545 8916532 ~ 8916931 (-)
G34577 NA non-coding upstream 356065 8925052 ~ 8925317 (-)
G34578 LOC107715750,LOC107587423,LOC107709820 non-coding upstream 356683 8925670 ~ 8927031 (-)
timm8b timm8b,LOC107717885,LOC107598437 other downstream 135496 8429700 ~ 8431586 (-)
G34372 zbtb44,LOC107597664,LOC107717865,LOC107677410,LOC107587334,LOC107722796 other downstream 152276 8411882 ~ 8414806 (-)
si:ch211-117m20.4 si:ch211-117m20.4,LOC107663429,LOC107597540,LOC107717881,LOC107677428,LOC107677427 other downstream 403056 8160877 ~ 8164026 (-)
si:dkey-220k22.3 NA other downstream 845324 7718565 ~ 7721758 (-)
LOC122345606 LOC107712378 other downstream 855258 7706970 ~ 7711824 (-)
LOC122345093 NA other upstream 105242 8674229 ~ 8677718 (-)
G34580 LOC107681240,LOC107709820,LOC107560234,LOC107715750 other upstream 360483 8929470 ~ 8930053 (-)
vamp5 LOC107594989,LOC107681225 other upstream 646511 9215498 ~ 9220528 (-)
G34789 vps37b,LOC107594993,LOC107673398,LOC107656485,LOC107587312,LOC107709855,LOC107721558 other upstream 768841 9337828 ~ 9402623 (-)
si:dkey-96l17.6 si:dkey-96l17.6,LOC107672751,LOC107738297,LOC107592400,LOC107744487,LOC108434467,LOC105902719 other upstream 1755972 10324959 ~ 10335343 (-)

Expression


Co-expression Network