mxd1 (mxd1,LOC107670395,LOC107708253)


Basic Information

Item Value
gene id mxd1
gene name mxd1,LOC107670395,LOC107708253
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 2555476 ~ 2579803 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240229.1
GCGTACAGTAACATGACAGCAGCTAGCAAACATCTCATCTGCCTGCCTCAACGACGTTATGGTTTCGCTAGCTGCGTgttttttctcctgtttttgaTTCCTTTTTCCTCGGTTGCACGCAGCTTCAGCTTAGCATGTGCGGCTCGAGCTGTTCAATAAATAGCCAGATCGTCTGTCACGCTTGAAATATCGAAACCAGCGATTGTTTGGACGTTTGGAGGccgtgtgttttattttaaagcctaTTTTCAACGCGTTTTTTTTCCAGCGACCAATCgagattttttatttcatttaaatttttttattttttttttattgcacaacACTATTGCCTTCCACCTCGCTGGACGGGCATATCAAAATTgacgggttttttttttattaaaccaagAAGGAATCGGGGTtgaatgctgtttgttttccaACCAGCAACCGACACAGCAGCACCAAAGCTCaaattattatcaaaaataatcaCCAGCTgcttaaatatactttttttgtgtgtcaagCGGTGCAATCTGGCAACCCGTGCCCTCCTCACATCGATCTGACTGAGCTGTCAATCCAGTATTTTtgcctattttttttcctcctgctcTCTAGTTAACAGCGTTTGCTGTCAGTACCAGAGCCTAAAATTGACCAAGTGCAGAACTAAAGCCGTGAGCTCTTATCTGTTTGACAGCTCGTCTATAAAAGTCTTCACCACTTACATGCTTTCAGGAAGGGTTGCCAGATCGTGCCAACCTGGACGGGTTTTCTTGCTCGTTTCGCGTTAACGTGCAAAATCTCGTTTAACATGAACAGGACTAGTTAACTAGTTACTTCTCGGCAGCTGAGGGACGTTTTTTATTCGGTTTTATCATCCAGCTCTTTGGAAACCAGcgtgtttgttattattattattattattttttactctcCGTTGTTTTTGTACACGTTCctgttttttctcaaataccAGCCCCGCATCTAAACGTCTCCCTCGCTGCCTTATGCAAGACAAAAACTGACTGGATTTTTCTGGAGGAGGAAGAAGCGTGAAGGAACGAAAGGCTGccgcttgttttttttccccgccGCCGCCGTTGTTTGTTTCTGACCCGGATTGTCGTTTTTTTAAAATCGCTTTTCGTTGCTTAAAATGACGGCTATCGAGAAACTGCAGATGCTGATCGAAGCGGCTGAATATCTCGACCGAAGAGAAAGAGAAGCGGAGCACGGCTATGCCTCCATGTTACCCTTCACCAGCAACAAAGAGAGGGACGGCTTGAAGAGGAAAATCAAAAGCAAGAAGAACTGCAGCAGCAGATCCACACACAACGAGATGGAGAAGAACAGGAGGGCACATTTACGGCTGTGTTTGGAGCGCTTAAAATCCCTCGTGCCCTTAGGACCAGACTCGAACCGCCACACAACCCTCAGCCTCCTTATGAGGGCCAAGGAACACATCAAGagGTTGGAGGACAGCGAGAGGAAGGCCCAGCACACTATAGACCAGCTGCAGAGAGAACAGAGACACCTGCGCAGACGCCTGGAGCAGCTCGGGGTGGAGCGCATACGCATGGACAGCATGGGCTCCACCATCTCTTCAGACAAGTCTGACTCCGACCAAGAAGAGGTGGATGTTGACGTGGAAGGCACAGACTATCTTCTGGGAGACCTGGAGTGGAGCATGAGCAGCGTGAGCGACTCGGACGAGCGGGGAAGTTTGCGCAGCAGCTGCAGCGATGAAGGCTACTCCAGCGCTAGTCTCCGTCGACTCGCTAACTCTCAGGACAAGAACCCCGCGCTGGCCTGCAGTCTATAAGAGCACAGAGCGCCCGTTCATCTCCACCGCTCCACACACAGCTCCTCCTCTCATACTTGAACGCTGTTCTGACCCACGAGCTCGAGGGAAGCCGTCCGCTGACCAGACCTCACTGACCTCACCGCCTTCGTCCGATCAGATCGTCCCGGCCGCTTGCCTTCGACCCTTAAAGACCCGATGAAGAACGTGTCTCTCAGAAGCGTCTGGACACCTGCTTTACGCACGAGTCTGAACAGAAAGCTCTCTTCTGCTCACAAAGCCTGTGCTTTTGAACCGAGATGCAGCAAAAGCAGTCACATTCTGAAATACttctactatttaaaataaaatatttaaatatttaaaatttcatttaattcaaagctgaatattttttgcatcattactccactcccatgatccttcagaaatcatcttttttatttaatt
>XM_043240230.1
CAGGCGTACAGTAACATGACAGCAGCTAGCAAACATCTCATCTGCCTGCCTCAACGACGTTATGGTTTCGCTAGCTGCGTgttttttctcctgtttttgaTTCCTTTTTCCTCGGTTGCACGCAGCTTCAGCTTAGCATGTGCGGCTCGAGCTGTTCAATAAATAGCCAGATCGTCTGTCACGCTTGAAATATCGAAACCAGCGATTGTTTGGACGTTTGGAGGccgtgtgttttattttaaagcctaTTTTCAACGCGTTTTTTTTCCAGCGACCAATCgagattttttatttcatttaaatttttttattttttttttattgcacaacACTATTGCCTTCCACCTCGCTGGACGGGCATATCAAAATTgacgggttttttttttattaaaccaagAAGGAATCGGGGTtgaatgctgtttgttttccaACCAGCAACCGACACAGCAGCACCAAAGCTCaaattattatcaaaaataatcaCCAGCTgcttaaatatactttttttgtgtgtcaagCGGTGCAATCTGGCAACCCGTGCCCTCCTCACATCGATCTGACTGAGCTGTCAATCCAGTATTTTtgcctattttttttcctcctgctcTCTAGTTAACAGCGTTTGCTGTCAGTACCAGAGCCTAAAATTGACCAAGTGCAGAACTAAAGCCGTGAGCTCTTATCTGTTTGACAGCTCGTCTATAAAAGTCTTCACCACTTACATGCTTTCAGGAAGGGTTGCCAGATCGTGCCAACCTGGACGGGTTTTCTTGCTCGTTTCGCGTTAACGTGCAAAATCTCGTTTAACATGAACAGGACTAGTTAACTAGTTACTTCTCGGCAGCTGAGGGACGTTTTTTATTCGGTTTTATCATCCAGCTCTTTGGAAACCAGcgtgtttgttattattattattattattttttactctcCGTTGTTTTTGTACACGTTCctgttttttctcaaataccAGCCCCGCATCTAAACGTCTCCCTCGCTGCCTTATGCAAGACAAAAACTGACTGGATTTTTCTGGAGGAGGAAGAAGCGTGAAGGAACGAAAGGCTGccgcttgttttttttccccgccGCCGCCGTTGTTTGTTTCTGACCCGGATTGTCGTTTTTTTAAAATCGCTTTTCGTTGCTTAAAATGACGGCTATCGAGAAACTGCAGATGCTGATCGAAGCGGCTGAATATCTCGACCGAAGAGAAAGAGAAGCGGAGCACGGCTATGCCTCCATGTTACCCTTCACCAGCAACAAAGAGAGGGACGGCTTGAAGAGGAAAATCAAAAGCAAGAAGAACTGCAGCAGCAGATCCACACACAACGAGATGGAGAAGAACAGGAGGGCACATTTACGGCTGTGTTTGGAGCGCTTAAAATCCCTCGTGCCCTTAGGACCAGACTCGAACCGCCACACAACCCTCAGCCTCCTTATGAGGGCCAAGGAACACATCAAGagGTTGGAGGACAGCGAGAGGAAGGCCCAGCACACTATAGACCAGCTGCAGAGAGAACAGAGACACCTGCGCAGACGCCTGGAGCAGCTCGGGGTGGAGCGCATACGCATGGACAGCATGGGCTCCACCATCTCTTCAGACAAGTCTGACTCCGACCAAGAGGTGGATGTTGACGTGGAAGGCACAGACTATCTTCTGGGAGACCTGGAGTGGAGCATGAGCAGCGTGAGCGACTCGGACGAGCGGGGAAGTTTGCGCAGCAGCTGCAGCGATGAAGGCTACTCCAGCGCTAGTCTCCGTCGACTCGCTAACTCTCAGGACAAGAACCCCGCGCTGGCCTGCAGTCTATAAGAGCACAGAGCGCCCGTTCATCTCCACCGCTCCACACACAGCTCCTCCTCTCATACTTGAACGCTGTTCTGACCCACGAGCTCGAGGGAAGCCGTCCGCTGACCAGACCTCACTGACCTCACCGCCTTCGTCCGATCAGATCGTCCCGGCCGCTTGCCTTCGACCCTTAAAGACCCGATGAAGAACGTGTCTCTCAGAAGCGTCTGGACACCTGCTTTACGCACGAGTCTGAACAGAAAGCTCTCTTCTGCTCACAAAGCCTGTGCTTTTGAACCGAGATGCAGCAAAAGCAGTCACATTCTGAAATACttctactatttaaaataaaatatttaaatatttaaaatttcatttaattcaaagctgaatattttttgcatcattactccactcccatgatccttcagaaatcatcttttttatttaatta

Function

symbol description
mxd1 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to act upstream of or within negative regulation of transcription by RNA polymerase II. Orthologous to human MXD1 (MAX dimerization protein 1).

NR:

description
max dimerization protein 1 isoform X2

GO: NA

KEGG:

id description
K09114 MXD, MAD; MAX dimerization protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240229.1 False 2245 mRNA 0.47 6 2555477 2579800
XM_043240230.1 True 2246 mRNA 0.47 6 2555476 2579803

Neighbor

gene id symbol gene type direction distance location
zgc:65851 zgc:65851,LOC107670379,LOC107708255,LOC107668750,LOC107599600,LOC107755851,LOC107573085 coding downstream 11902 2536025 ~ 2543574 (-)
purba LOC107737074,LOC107755849,LOC107668742,LOC107670383,LOC107599601,LOC108431741,LOC107580671 coding downstream 28139 2524559 ~ 2527337 (-)
LOC122346100 LOC107757959,LOC107587426,LOC107709681,LOC107681216,LOC107560221,LOC107560220 coding downstream 137423 2385151 ~ 2418053 (-)
LOC122345768 LOC107562125,LOC107690349,LOC107554462,LOC107715242 coding downstream 456295 2090152 ~ 2099181 (-)
LOC122346063 LOC107747844,LOC107554104,LOC107556635,LOC107667225 coding downstream 465320 2087785 ~ 2090156 (-)
LOC122345702 figla coding upstream 27411 2607214 ~ 2609585 (-)
tet3 LOC107654213,LOC107708251,LOC107557386,LOC107697244,LOC107551814,LOC107755856 coding upstream 244368 2824171 ~ 2866043 (-)
ap3m2 ap3m2,LOC107755857,LOC107551816 coding upstream 286362 2866165 ~ 2874893 (-)
kat6a kat6a,LOC107708249,LOC107697242,LOC107755858,LOC107699914,LOC107551817 coding upstream 296506 2876309 ~ 2910382 (-)
LOC122345463 sema4c,LOC107699920,LOC107697240 coding upstream 443046 3022849 ~ 3089522 (-)
LOC122346060 cacna1ba,LOC107560222,LOC107587427,LOC107709695 non-coding downstream 119776 2433286 ~ 2435700 (-)
G32740 cacna1ba,LOC107709695,LOC107757972,LOC107587427,LOC107681248,LOC107560222,LOC107690670 non-coding downstream 130664 2422985 ~ 2424812 (-)
LOC122344845 LOC107709689,LOC107560224,LOC107681222 non-coding downstream 170775 2383907 ~ 2384701 (-)
LOC122344860 LOC107560224,LOC107690695,LOC107757958,LOC107681222,LOC107709689,LOC107587469 non-coding downstream 176081 2377967 ~ 2379395 (-)
G32727 LOC107681241 non-coding downstream 179813 2374002 ~ 2375663 (-)
G32870 NA non-coding upstream 72641 2652444 ~ 2728807 (-)
G32881 NA non-coding upstream 170156 2749959 ~ 2797599 (-)
G32882 NA non-coding upstream 185480 2765283 ~ 2766771 (-)
G32883 NA non-coding upstream 187976 2767779 ~ 2774190 (-)
G32884 NA non-coding upstream 189398 2769201 ~ 2770371 (-)
G32857 NA other downstream 1330 2496504 ~ 2554146 (-)
LOC122344636 pex11a,LOC107556261,LOC107714788,LOC107690406,LOC107691149,LOC107715221,LOC107551461 other downstream 532554 2020096 ~ 2022922 (-)
G32676 NA other downstream 587728 1966637 ~ 1967748 (-)
ypel1 ypel1,YPEL1,ypelc,ypel2b,LOC103374080,LOC106586007 other downstream 861190 1673024 ~ 1694286 (-)
lrrc74b lrrc74b,LOC107755819,LOC107667596,LOC107599620 other downstream 1201062 1342606 ~ 1354414 (-)
snrnp27 snrnp27 other upstream 745 2580548 ~ 2585452 (-)
add2 add2,LOC107668755 other upstream 6784 2586587 ~ 2605917 (-)
LOC122344624 LOC107699921,LOC107708239,LOC107755860,LOC107697241,LOC107551809 other upstream 355940 2935743 ~ 3012819 (-)
G32908 sema4c,LOC107697240,LOC107708238,LOC107699920 other upstream 371659 2951462 ~ 2960177 (-)
coq5 coq5,LOC107560969,LOC107707852,LOC107656810,LOC107561264,LOC107702223,LOC107707851,LOC107560965,LOC101158254,LOC107755815,LOC107561265 other upstream 1164872 3744675 ~ 3752764 (-)

Expression


Co-expression Network