LOC122345801


Basic Information

Item Value
gene id LOC122345801
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 8999491 ~ 9001555 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240273.1
GTCACTGTACTGTTTATTCCTTGTAGTTAATAATTGGAGCATTTTCTACTAAACAAGAAAGCAAACAGAGTAAAGGTTGGTTTCTTACTGAACTTCAGGCTTTATAATCCAGTCCATCACAGGAAAAGGACGGGAGCTGCCTGGACAGGGCCTAAATTCATCTATTGGCTCAATTTGAAAAGGAATCATGGAAAGGAACATCATATATTTGTGGTTTTGTGCTTTTGCATTAGTTCATGGAAATCAAGAGACTTCACCACAACCTCCCATCAGTGATAAACTCCCATCATTAATAAAGATGAACAATGATTTTGCTTTTGACCTGTACAAGAGGCTTGTAGAAATGCCGGAGTATCGGTCCAAGAACATCTTCTTCTCTCCCCTCAGCATATCCATGGCCCTTTCTGAGCTGTCTTTAGGAGCCGGTGGAGAAACCAAAGAGCAGCTTCTCAGCGGCATCGGCTATAACCGCTCGGTCTTCAGCACTGAAGAAATGCACCAGATGTTCCACAGTCTCCTGGAAGAAATCGACCAGAGGACGGGGGTGGACATCGATGTCGGCACTGCTCTATATGCAAGCGACAAATCTAAACCTCATCCTAAGTTCCTGGAGAACATGAAGGAGTTTTACCACTCTGATGGCTTCACTGTGGATTTCAAAGCTGCAGAAACATTAgataaaattaatgaatatgTGAAGGAAAAAACACATGGGAAAATAGATCGAGCTGTTGATTCTCTGGATCCCAATACTTTAATGTTCCTTCTcacttacatatattttaaagGAAAATGGGACATGCCATTTAATCCAAACAAAACCAGTGAGGATATATTTCATGTGGATAATGAGACCACCGTTCCAGTACAAATGATGCACCAAACCGAACTTCTCAAAGTTTATTATGATGCTGAACTCTCTACTAAAGTCCTCTGCCTAGACTACAACGACTCTTTCTCCATGTTTCTGGCTATaccagatgaaaaaaaagatctgaCCATCAATGATCTGGAAAAGGCCATCTCTAGACAGCACATTGAAAAGTGGAGGGGATCTGTCTGGAAAagAAAACTTGACGTCTATGTTCCCAAGCTGTCTCTGAAGACAGACTATACCCTAAACGATATTTTGAAGGGAATGGGAATAACAGACATGTTTTCACATAAAGCTGACTTCTCAGGAATTGCAGAAGAAAATTTCTATGTTTCAAAGgttttgCATAAAGCCACCCTGGATGTAGATGAGGAGGGAACCACCGCAGCAGCAGTGACCACAATTGAAATCAAAGTTGCTTTGTTACCAATGCTGTTCCGTTTTGACCGTCCATTCATGATCTTCATCACTGACCAAAAAAATGACCACATCCTGTTCTTAGGAAAAGTTGTCAACCCAGCAGTGTGACATTCAAGATTTATCCAGCAGATGGCCATAATTTAACAACTATCATCATGCCAACCCCTTTAGAATTTTTCTAAAACAACTGTTGGTGTTACGTACTGTATGAAGATGGTTTCTAGATCTCCTTTAATACTGAATGTCTGCTTCCATTATGGCTACGTTAAATGGAAATGGTAAGACGTCTTCAAaagatttcaataaaataaagagaaaagcaaCTGGA

Function

GO:

id name namespace
GO:0030162 regulation of proteolysis biological_process
GO:0010951 negative regulation of endopeptidase activity biological_process
GO:0005615 extracellular space cellular_component
GO:0004867 serine-type endopeptidase inhibitor activity molecular_function

KEGG:

id description
K04525 SERPINA; serpin A

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240273.1 True 1622 mRNA 0.40 5 8999491 9001555

Neighbor

gene id symbol gene type direction distance location
LOC122344627 LOC107560223,LOC107711009,LOC107681213 coding downstream 1957 8992183 ~ 8997534 (-)
stxbp1b stxbp1b,LOC107560235,LOC107587321,LOC107690675,LOC107715760,LOC108423604,LOC108255382,LOC107681214 coding downstream 50113 8938254 ~ 8949378 (-)
dpp7 dpp7,LOC107709692,LOC107560239 coding downstream 122993 8871280 ~ 8876498 (-)
tsc1a LOC107709700,LOC107597815,LOC107681228,LOC107690665 coding downstream 355701 8632895 ~ 8643790 (-)
ak8 ak8,LOC107681224 coding downstream 368165 8611512 ~ 8631326 (-)
trafd1 trafd1,LOC107709840,LOC107681252,LOC107560230,LOC107587319,LOC107715758 coding upstream 352 9001907 ~ 9008032 (-)
LOC122345922 LOC107560213,LOC107709824,LOC107560217,LOC107709823,LOC107560218,LOC107681212,LOC107715747,LOC107715746 coding upstream 20997 9022552 ~ 9023686 (-)
nsmfb LOC107709845,LOC107560226,LOC107587468,LOC107715753,LOC107681255 coding upstream 135866 9137421 ~ 9165718 (-)
LOC122345763 LOC107560213,LOC107560217,LOC107709824,LOC107709823,LOC107560218,LOC107681212,LOC107715747,LOC107715746 coding upstream 164340 9165895 ~ 9168059 (-)
dnah10 dnah10,si:dkeyp-86b9.1 coding upstream 183993 9185548 ~ 9215006 (-)
G34607 NA non-coding downstream 8178 8991101 ~ 8991313 (-)
G34606 NA non-coding downstream 8468 8988611 ~ 8991023 (-)
G34583 NA non-coding downstream 65352 8933911 ~ 8934139 (-)
G34582 NA non-coding downstream 66411 8932860 ~ 8933080 (-)
G34579 NA non-coding downstream 72075 8927213 ~ 8927416 (-)
G34594 NA non-coding upstream 11751 9013306 ~ 9060814 (-)
G34704 NA non-coding upstream 245365 9246920 ~ 9248041 (-)
G34869 NA non-coding upstream 762518 9764073 ~ 9764532 (-)
G34871 NA non-coding upstream 764713 9766268 ~ 9766607 (-)
G34877 NA non-coding upstream 776078 9777633 ~ 9778238 (-)
G34580 LOC107681240,LOC107709820,LOC107560234,LOC107715750 other downstream 69438 8929470 ~ 8930053 (-)
LOC122345093 NA other downstream 321773 8674229 ~ 8677718 (-)
timm8b timm8b,LOC107717885,LOC107598437 other downstream 567905 8429700 ~ 8431586 (-)
G34372 zbtb44,LOC107597664,LOC107717865,LOC107677410,LOC107587334,LOC107722796 other downstream 584685 8411882 ~ 8414806 (-)
si:ch211-117m20.4 si:ch211-117m20.4,LOC107663429,LOC107597540,LOC107717881,LOC107677428,LOC107677427 other downstream 835465 8160877 ~ 8164026 (-)
vamp5 LOC107594989,LOC107681225 other upstream 213943 9215498 ~ 9220528 (-)
G34789 vps37b,LOC107594993,LOC107673398,LOC107656485,LOC107587312,LOC107709855,LOC107721558 other upstream 336273 9337828 ~ 9402623 (-)
si:dkey-96l17.6 si:dkey-96l17.6,LOC107672751,LOC107738297,LOC107592400,LOC107744487,LOC108434467,LOC105902719 other upstream 1323404 10324959 ~ 10335343 (-)
G35122 NA other upstream 1459653 10461208 ~ 10461709 (-)
G35371 znf703,LOC107599934,LOC107672788,LOC107744445,LOC107687685,LOC107726392,LOC107592299 other upstream 1866809 10868364 ~ 10874064 (-)

Expression


Co-expression Network