mvk (LOC107741241,LOC107672634,LOC107654617)


Basic Information

Item Value
gene id mvk
gene name LOC107741241,LOC107672634,LOC107654617
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 5671285 ~ 5679031 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240291.1
CAGAGGACGAGCGGGCGTGATGCTTTTGACGCTTTGCTTCAGGAGTTCTCGATCATTTAgcaaaactgttatttttacgGCTGCCAACTGTCGTGCGCCGAATTTAGCTCGGAGGATGAACAGAATTACAAGATTTTAGCGCGTCTCGTATTCGGTTTGGTCAGCGCACACCGATTTGTCAGAAATAGCTACAAATCAGAAGTTCAGAAGCTGTAATAATTAAGATGCAAACACGAGGAGAGTTTTTCGTTTCTGCGCCAGGGAAAGTAATTCTCCACGGTGAGCATTCTGTCGTGCATGGAAAGGTTGCTTTGGCTGTGAGCTTGAACCTGCGCACCTTCCTGCGGCTGCAGGTCACATCATCCGGTAAAGTGAGCATCAACCTCCCCAATATTGACACTTTCCTGTCCTGGGAAATAACTGCACTGCAGCCTCTTCTGGCAGGATGCAAAGTTTTGGCAGAGCAGGGGGACCCGAAGGAGCTTGATGCGGCTCTTTTGAAGAGGCTGCGTGAATTCGCAGGACTTTCGGAGGAATCCACGGACACGAGAAGCATGGCGGTGTTGGCCTTCCTCTATATGTACCTGTCGGTTTTTGCAGAGTCTCCGGCCGGTATCACGGTGTCTGTGTGGTCAGAGTTGCCCACAGGAGCCGGTTTAGGCTCTAGTGCTGCCTATAACGTTTGCCTGTCTGCCGCTCTGCTGTCTGCGAAAGGAACCGTATCGTATCCTCTTACACCGCAGCAGGAGTCGGCCAGGTGGAGCAGAGAGGAGATGGAGCTGATTAACAGGTGGGCGTTCATGGGTGAGAAGATCATCCACGGGAACCCTTCAGGGGTGGACAATGCTGTGGGCACGTGGGGTGGCTTTTTAAGATACCACGCTGGGAATATAACTCCGCTGAGCTGGGTCCCCATTCTGAGAATCCTTCTCGCTAACACCAAAGTACCGCGTAGCACCAAAGTGCTTGTTTCTGGAGTGAAGGACAAAATTAACAAGTTTCCCTCTGTAATGAAGCCAGTTCTGGAGTCCGTCAGCGCTGTGTCCTGCACATGTGAACAGACTCTCACAGAGATGGCCACGCAGGGACCTTCAGCTGAGCACTACGACATACTGGAGGAGCTGATTGATATAAACCAGCACCACCTGAACGTGATGGGCGTGGGTCACTCGTCTCTGGACACGCTGTGCAGGGTCACCCTGGCCAGAGGCCTGCACAGCAAACTGaccggagcaggaggaggaggctgCGGCATCACGCTCCTACGGCCAGAAACGGACGCTTCAGTGATTCAGAGCACCGTTGAGGAGCTGAAGGCCTGTGGCTTTGACTGCTGGGAAACCAGCATCGGAGCTCCTGGAGTCCAGCAGCACTCTTCAGCTGCGCTCAGGCAGGACATCCTGAAGATCCTCAACAGCTACTGAGACTTAAAGAAAGCACGCTGTACTGTATGCATCGACGTTGCCAGGCGTTACTCTGGATCCTCGTTCGCCAAATGTCGTCTATCgcaatgcagtttttttacatatttggaaaatgttattttccatTGTGTTTCCATTCCATGCCATTGTTTCTTTTGAAGTGCGTGCATCTAAAGTTTTGCCTGCCCCTAGATGGCAGCAACGTGTAAAACAGAATTGATGCACCTCAGACAGCATGTATGGAATGTAAATAATAGATCTTTTAATTAAGCGTTatactaaattaatttaaaaatagcttttaataaATTTCAGCCTTTTCGTGAAAGGCTGTCATGCACGA

Function

NR:

description
mevalonate kinase-like

GO:

id name namespace
GO:0008299 isoprenoid biosynthetic process biological_process
GO:0016310 phosphorylation biological_process
GO:0005737 cytoplasm cellular_component
GO:0004496 mevalonate kinase activity molecular_function
GO:0005524 ATP binding molecular_function

KEGG:

id description
K00869 E2.7.1.36, MVK, mvaK1; mevalonate kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240291.1 True 1767 mRNA 0.50 10 5671285 5679031

Neighbor

gene id symbol gene type direction distance location
ube3b ube3b,LOC107654616,LOC107752137,LOC107597296,LOC107595925,LOC107741240,LOC107672623 coding upstream 4458 5653575 ~ 5666827 (+)
acacb NA coding upstream 50585 5595095 ~ 5620700 (+)
rusc2 rusc2,LOC107752133,LOC107684988,LOC107741245,LOC107595920,LOC107672606,LOC107597340 coding upstream 78106 5572311 ~ 5593179 (+)
atp8b5a LOC107684987,LOC107741246,LOC107672607,LOC107595921,LOC105889921 coding upstream 101197 5548837 ~ 5570088 (+)
LOC122346030 LOC107684986,LOC107741279,LOC107597300,LOC107672622,LOC107595956,LOC100535393 coding upstream 123701 5503308 ~ 5547584 (+)
fam222a fam222a,LOC107752139,LOC107654618,LOC107597290,LOC107741239,LOC107672614,LOC107597291,LOC107580258 coding downstream 69087 5748118 ~ 5804954 (+)
LOC122346201 tchp,LOC107741236,LOC107752150,LOC107595960 coding downstream 172935 5851966 ~ 5857677 (+)
ankrd13a ankrd13a,LOC107595961,LOC107597335 coding downstream 205890 5884921 ~ 5894400 (+)
sgsm1a sgsm1,LOC107654621,LOC107752142,LOC107672618 coding downstream 241543 5920574 ~ 5954193 (+)
gatc LOC107752156,LOC107654604,LOC107672604,LOC107741226,LOC107595969 coding downstream 277395 5956426 ~ 5958413 (+)
G33348 NA non-coding upstream 131887 5469072 ~ 5539398 (+)
LOC122346031 NA non-coding upstream 203254 5456097 ~ 5468031 (+)
G33206 ankle2,LOC107729791,LOC107597302,LOC107672626,LOC107741250,LOC107684979,LOC107595914 non-coding upstream 268501 5401315 ~ 5402784 (+)
G33257 NA non-coding upstream 300764 5368434 ~ 5370521 (+)
G33251 NA non-coding upstream 334649 5336349 ~ 5336636 (+)
G33454 NA non-coding downstream 138389 5817420 ~ 5870510 (+)
G33453 NA non-coding downstream 180259 5859290 ~ 5880529 (+)
G33471 NA non-coding downstream 184301 5863332 ~ 5897366 (+)
G33492 NA non-coding downstream 400052 6079083 ~ 6079423 (+)
G33499 NA non-coding downstream 446299 6125330 ~ 6165323 (+)
G33355 kctd10,LOC107595924,LOC106564472,LOC107672630,LOC107597295,LOC107752136 other upstream 21400 5604333 ~ 5649885 (+)
myo1ha myo1ha,myo1h,LOC106585663 other upstream 23238 5625267 ~ 5648047 (+)
fbrsl1 LOC107656817,LOC107600129 other upstream 768882 4644101 ~ 4902403 (+)
G33174 NA other upstream 1048225 4622507 ~ 4623060 (+)
G33015 NA other upstream 1526889 3605186 ~ 4144396 (+)
tnpo1 tnpo1,LOC107700926,LOC107655929,LOC107596175 other downstream 280801 5959832 ~ 5982816 (+)
G33494 foxd1,LOC107598200,LOC107718663,LOC107700903,LOC107596217,LOC107757501 other downstream 408231 6087262 ~ 6088562 (+)
hexb hexb,LOC107718643,LOC107700931,LOC107655935,LOC107570862 other downstream 568764 6247795 ~ 6255340 (+)
G33664 NA other downstream 794316 6473347 ~ 6491986 (+)
dab2ipb dab2ipb,LOC107693836,LOC107710761,LOC107700936,LOC107726296 other downstream 938245 6617276 ~ 6762808 (+)

Expression


Co-expression Network