CI01000004_17062704_17110319 (CRHR2.S, CRHR2)


Basic Information

Item Value
gene id CI01000004_17062704_17110319
gene name CRHR2.S, CRHR2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 17062704 ~ 17110319 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_17062704_17110319.mRNA
ATGGATGCGTCCCTCTTTCACTTCTTCATAGAGGAATTCGGCGACTCCAACTGTACTCTTATGGGTGCTTTTCAGCACACTTTATACGAGAATTCGTCTTTCGCGTCGATGAGCGTCGATGGTATCTATTGTAACTCTACCACGGATGAAATTGGAACTTGCTGGCCAAGAAGCAACTCTGGACGAATAATTGAGCGACCGTGTCCGGAGTACATTAACGGCGTCAAATACAACACCACTAGAATTGCTTACAGAGAGTGCTTGGACAATGGTACATGGGCACTGAAAAGTAACTACTCCAACTGTGAGCCCATTTTAGAGGAAAAGAGGAAGTACCCCATGCACTACAAGATAGCCCTCATCATAAACTACTTTGGTCACTGTATATCTGTTGGAGCTCTCGTTATTGCCTTCATTCTCTTTCTGTGCTTGAGGAGCATCCGATGCCTTCGCAACATAATCCACTGGAACTTAATTACGACTTTCATTCTGAGGAATGTAATGTGGTTTTTGCTTCAACTGATTGATCAAAACATTTATGAGACAAATGAGCCCTGGTGCCGCCTTATAACAACAATCTATAATTACTTTGTGGTGACCAATTTTTTCTGGATGTTTGTGGAGGGCTGCTATCTTCACACGGCTATTGTGATGACATATTCCACAGACAAGCTTCGTAAATGGGTCTTCCTCTTCATTGGATGGTGTATACCATGTCCGATAATTATAGTGTGGGCCATTGGAAAACTTTACAATGAAAACGAACAATGCTGGTTTGGGAAGGAACCTGGGAAGTACATAGACTACATTTATCAGGGGCCCGTGATTCTAGTTCTTCTTATCAATTTTGTGTTCCTTTTCAACATTGTGCGCATTTTAATGACAAAGCTGAGGGCATCGACCACATCTGAAACTATACAATACAGGAAAGCTGTGAAAGCCACTCTAGTGCTTCTGCCTTTACTCGGTATCACATATATGCTGTTCTTTGTGAACCCAGGGGAGGATGACATATCTCAAATTGTATTTATCTATTTCAACTCATTTCTTCAGTCCTTTCAGGGATTCTTTGTGTCAGTATTTTACTGCTTTCTTAATGGGGAGGTG

Function

symbol description
crhr2 Human ortholog(s) of this gene implicated in asthma. Orthologous to human CRHR2 (corticotropin releasing hormone receptor 2).

NR:

description
corticotropin releasing factor receptor 2

GO: NA

KEGG:

id description
K04579 CRHR2; corticotropin releasing hormone receptor 2

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_17062704_17110319.mRNA True 1107 mRNA 0.42 11 17062704 17110319

Neighbor

gene id symbol gene type direction distance location
CI01000004_16869205_16944944 CLSTN2 coding upstream 117760 16869205 ~ 16944944 (+)
CI01000004_16812706_16814956 NA coding upstream 247636 16812706 ~ 16815068 (+)
CI01000004_16695941_16729500 NA coding upstream 332985 16695633 ~ 16729719 (+)
CI01000004_16649360_16654303 NA coding upstream 408351 16649171 ~ 16654353 (+)
CI01000004_16579927_16586961 NA coding upstream 475507 16579927 ~ 16587197 (+)
CI01000004_17214619_17236647 PTH1R, PTH1RA coding downstream 104300 17214619 ~ 17236674 (+)
CI01000004_17320843_17323478 NA coding downstream 210173 17320492 ~ 17323777 (+)
CI01000004_17368205_17412619 NA coding downstream 257328 17367647 ~ 17412936 (+)
CI01000004_17419825_17424299 MGC53997, TBB2A, TUBB2B.L, TUBB2, TUBB2A, TUBB2B coding downstream 309506 17419825 ~ 17424743 (+)
G34427 NA non-coding upstream 10169 17051563 ~ 17052535 (+)
G34400 NA non-coding upstream 36728 16971995 ~ 17025976 (+)
G34391 NA non-coding upstream 106530 16928474 ~ 16956174 (+)
G34399 NA non-coding upstream 110085 16950871 ~ 16952619 (+)
G34362 NA non-coding upstream 387890 16674505 ~ 16674814 (+)
G34437 NA non-coding downstream 11136 17121455 ~ 17129497 (+)
G35266 NA non-coding downstream 174167 17284486 ~ 17285053 (+)
G35271 NA non-coding downstream 195712 17306031 ~ 17306246 (+)
G35272 NA non-coding downstream 201168 17311487 ~ 17311827 (+)
G35183 NA non-coding downstream 202700 17313019 ~ 17314281 (+)
G33815 NA other upstream 996240 16063415 ~ 16066464 (+)
G34220 NA other upstream 1122754 15939357 ~ 15939950 (+)
CI01000004_15091390_15096502 GA45B, GADD45B, GADD45BB other upstream 1970735 15091200 ~ 15097173 (+)
CI01000004_14036114_14036449 KIAA0040 other upstream 3025804 14035393 ~ 14039142 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_015133 CRHR2 coding NC_007113.7 CM002886.2 2563192 ~ 2608112 (+)