LOC122345865 (si:dkey-114c15.7,LOC107597238,LOC107672487,LOC107733230,LOC107592265,LOC107748635)


Basic Information

Item Value
gene id LOC122345865
gene name si:dkey-114c15.7,LOC107597238,LOC107672487,LOC107733230,LOC107592265,LOC107748635
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 16379355 ~ 16389644 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240348.1
TCCTCAGCGCGCCGCCGTGCGAAATATGGGGGCGCGCTCTTTATGGCAGGTCTCAAAAGAGGGGGAGCAGCAGCGCACGAGCGCGCCGTCGTTGTCAGGGACGGACGGGGTACAGCTGGGAAAAACACATCCTCACGCACGCACACCCCCGTCTCCGTTACGCACGTACAtaaggcaaaaacaaaagcgACTCTAAAGGAGGAGAGAGCGGAGCGCGAGCATGCGGCGAGGAGCAGGCGCTGCAGCAGACCTTTGTTTGTTTCCTGGAAACCCTGGAGCGCGAGGGAATAAAATGGAGTGGTAAGGGGCTCCGAGGCGCGAGAGGCGCGTCCACCTGCTGCTACCGGGGAGGCAGTCAGAGAGGGCAAACATGCTGAGACCGCTGCATTGAAGGGGGTTacgaaaacaacaacaacaactgcgTATGACAACATTCTGCACGCCGAGCGATCAAACGGAGTCTTTAAAGCGGGCGGGACGGGTGTAACGGGAGGCTGGACAGTTGTAATTATGTTAGTGAGAGAGAGATTCAGTTCAGACTGATGGATGTTCTACAGGAGTCCCGATACTCAGGGGCAGATCGCAGCCCCTGCCCAAGAGACGTTAGTGAAAATGaaTCACATGACCCGTTGGCAGATGTGTCACATGATCTAAGGCGCTGTGATGACATTGCTCCTGCGGCGCTGTCCCTGCCCTCCCTCTGTGGCCAGAGTCAGACCTCTGAAGGTCCTCTTAGCCCAGCTGACCTGCATGATGGGTCTGTCTCCAACACCacctctctgtcctctctctcttcattttcctctctttcctccctttcgtctctctcttctgtgccctgttccaaacctgtgacGCCCTGGTCTGTGCCGCAGACCTGTGACAGGTCGTCCCTCTCTAACATGGACTCCAGGGGCGGAGACTGCCTTAGCTGTCTGATCCCCAAAAATCAGACAGAACCGGAATCCTGTGAGTCCGTACTCGGCTTTGCCAGCATCAATTTGCAATGCCTTGGCCCCGCCCCCAGCGCAGGTCGCTATGGTGACCAGGTTCTATCAGACCAGCTGCTCAGTGGCCCTGCCCATCCAGCTGTTACCAATGAGGGGGCTGAAGAAGGGAGGTCGATGCAGGAGAGCGAATCAGATGAGGACCCTGCATCCAGGAGCATATACGAAGGTCTAGGAGAGGAGGCACAGGACTGGAGCTGTCTAGAGACTCTCATCAGTGAGAGTCGTATGGAGCTATTGGACTTATGCTCCCGCAGCGAACTTGCAGTAAATCTGTTCTGTGAGGAAGATGTGGAGAATTACATGTTTCAGGAGGAGGAGACTTCACTTGGCACTGATGTCTGCTCACTCAAGATACGCTATGAGTCCTATCAGGATGGAGTGCAGGAGAGGAGTGAGTCTGCCTTACAGGATGAATCTCAGCTAGGTTTCTTTCCTAGCTTACCTTGCAGTAGAAAAGAGGGGCCAAAAGAGAAACCAGACCAATCCGCTGAGATTAAGGCTGATGACCACGTGACCCCCACTATTAGCCCAGACAGTAACTTTCTTTTTGACCTCAGTAACTCTCCAGAAGATTCCGGTGAATTCAGTGATGACAGCTCTTGCACAGGCTCCCCAGACCATGGGCTCTCCCTTCGCCATGGCCGCTTGTCCAGAGAAAACTCTAGCTCCTCCAGCCAGCTAAGCTACCGCCTCAGAGCCAAGAGGAAGGTGGCCTACCGAGAAGACTACTTGTATGATGTGGACTCAATAGAAAGtgagaaaaatgcagaaaaacgaGAAAAAACCCCTGCTGGGTTTAAGAAAGAGCGTGATGACGACTGGTGCCCAAAGAAGAGGCGGCGGTCAAGTAGGAAGGACCCACctgtcattataaaatatataatcattaatcGTTTTAAAGGCCAGAGGCACATGAGAGTGCGTCTGGGGCGAGTCGACCCATCACCTGCTGTGGTCTGTCTGAGTCCAAATGCTCTGCTTCACTATGAGAGACTTGCACCATTAAAAGCATACTggcaggaaagagaaagagagcagcaGGAGAAGAATAGATTAACAGCAGCAGAAACAACCAAACGTCTCAATGGCTGCAAAAGACCAAGCACTGCTCCCAAACGCAAGCACAGGATGGCCAGACTCAGGATCCAGCAGATCCACACCGTACAGACTTCCCTCCCCAGCCAAACTATAGTGGTCCCCATCCACAATCAACCAGGGGGGACCGAATCCCTGAAAAGCACAGAGGAACCAAAAGAGGACATTACCTCCGTTACACACACTGCCAGGGCAAAAAGCAGAAcacaggagagagaggaaagaagaAAGGCAGGCAAAACAGGGAAGATAAAGAAGTTCAAAAGTGAAGCAAGACTTCGGTTGAAAAAGTTAAAAGAGGCTGAAACACAGGAAGTCCCAGAATCCTCTGAGATTGAGCAGTGCAGCCCATGTTTACCAGAAAACCTTAGTAACTCTTTGGAAGGTAATGCCACAAATGAAACCTCCAGTAATGACCCTGAAAAATGCACTTTGACCCCTGCTGCTCCGGGGACTGATGGAAATGCTGAACTCCTTCCCGGGGGTTACCTGCAAACACTTCTTGAAGCCTCTGAGTCATCAAGCACTGCTAACATTAACTATTTTCATTCAGGGCTACAGAATCCCACACTTCAGCCAGTCCAGAGCTGTgttctctctcctccctctgAATCAGAGCTGCCTCACTCTCCTCCACCTATGAACCACGGGCCCCACCACACGCATTATACTGAGCCAAACCTTACTGAACCAAACCAGCCCATTTCATGGCCATCCCAACAATCTGCTGAACAGCTGCCCTTCTCCCCAGACATCCCAACCCAGTCTCCAATGATGCCATCGGGCTTTCCCACACCGTTGCCTGTGTTAGCAGGGGATAGCACAAATGTCACAGGCTTTGGCCAAGTGTCTCTGTCAGGGTGCAGAGTCTCATATGAAGAATCCCAACCCGATGCTGATTATGGCTTGAGTCCGACTGGCTCTCGGAGTGACGGTGTGGGGCGGCTGGTTAGCTTTAACTCCCTGGGGTCACTTTCTGCCACCTCTAGCAACTACAGCTCACTCAGcctgagagagggagaaagggagagagaagaggaaattGGTGAGATCAACGATGGCTTCTTGCCACATTGCAGCCCACGGCTCATCTTGCAGCAAAGTCTAGAGGAGGTTGCTCCACTTCGAGAGTCGACTGACCTCTTGGATATCTCCAACTTCACCCCTGACAAGTTCCGGCATTCATCGCTCTCTGAAATGTCACCACCGGACACACCTAACTCTTCCCCTCAACTGCTGGGGAACTGTGGTAAATCTGGGGAATTTTCTGAAGCAACAGAAGCAAATGTGCAATGGAACTGTGGAGTTGTCCCGCAGCTTAATCAAGACGGAAACCCACACCACCTACAGATACACTCTTTCAACACAGAGGAGGATGAAGTAGGGCTAAGGGATCACAAAGGCTCAACGAAAAAGGGTGGGAAAAATGGACAAGCCACCAAAAAGAGCAAAACTGCTAAAACAGCGAAAGGAGAAAAAGTAAAGCTCCCACGTCAGGGTTCTCGTTCTGTGCGGAAGATCAAAGCCTTGCTAGAGGGAAAAGCAGCCAAAAGTGTCGGAGGGTCAGGAAGTGGTGCTTCTTCCCCTACTCCGTCGCTTGGCTTAATTGGAGCTCAGGGGGAGTGGCCTATTACTGGGGGACTGTCAAACGATGACCAACGAGAATTCCAAGAGCCATCAAACATCCTGTCCAATATAGTGTCTGGTATGGCTGAGGTACAGCGTTTCATGAGGGCCTCTGTGGAGCCTCTTTGGGGGCCTTGTCTTTCACCCGGTCAGCATGCACTCCAGAGCCAGACGCTGAAGATTCTGGGTAATGCTGCTGATCTTAAAAAGCGGGGTGGTGCCTCAAGTGGAGGTCGAGGGAAGAAAGGGGCTGGGCGTGGTGGTAAAGCACTGCCTAAACTTCTCCCACCTGGCTTCTTTCCTAACCTCGGATTGGACTGTCTCCCACTTCCACACCGTCCAgcccacaaaaaaatgtatcgtCACAAAAGCAGCGCTAAGTTTGCCCGCGAGGAACTCTTAGCGGGTAAAAGGGACATAAAAGGAGTAGCACTGACCGCTTTGGTCGAGAAACGGAGCTATAACACTGTATGTGTTAAATCGGTGTCACAGAACCATGGTTTAGACCGAGCCCAGCGCCCTGCTCTGTCTCTCAGCAAATGGTTGCCTTCTGTTCAGGGGTCAAAGATCATGTGTAGTATTCTGTGCTAAAAATCGTTTCCCCTCATTTCTGTGCCAACCCCTCAGAACACTGGGCTTTGACAAGCTAAAAGAAAGCATCTTGACCGAGATGCTCTTGTTTTCTGAGGTTCTGAAATTTCACAagagatttttttcattgttgttatttgtttataaGTTGTGAAAAAAGGAGGTTCATTCATCTGTTCTCCAGTGAATCTCCTCCTGCCAGTATCAAAATGCTGTTGTACACAGACATATGCACTATTTACAAAACAAGAttatatcaaacatgtttaaattaatGTGCCAAACTATGAACAATTAAATGTACAGACATTTTTATCTACAtaaatatttgctgttttataatgtgGCAGTGATTGaggagcgtgtgtgtgcttgGGATGGGGGGGGTTGTTAATCTGAGATTCACTCCTGTTGCATCACATCTGTACAAACAGCTAGCAGCGAGGAGTCATCTCaacaatcagaagaaaaatgctgttggtttattttctatgttttacACTCCTGGCTAGTTCAAGATTAGAGGCATGAAGTAAGAGATGCATGATGAGAATTGGTGGAAGGAAGCTGAAGTGCTATAATGGCAGAGAAAAACATTGGTTGCCTTTCATTCTGATGTGTTTCTGGATGGTCAAAGATCATTGTTCGTGTGTAACAAGGTAAGAAAAGGATCATTCCTTCTTTATAACAAGACTCAATGCATTTTAACTCGCTTATGTCCCCAAGTTTCTAGTTTTGgtaaatatatttctctgtACCTCAACCCTCCAAACTGGTTAAGAACAGGACcaaatttttttctaatttgttgCTAGTgatgtgcatgcatttaaaacatgataTGGATATGTGCTGTGAATGCTGATCCCCTGTATTACTTTCTGACTCGCCTGTTTTTTCTTACCTGATCTCAAAACCATTGTTTTTCTATTGCTGTTGGAATGTTATTTGTTGTGTTATAAAAAGAGGGAAAGATGCCAACCTGGTTACCCCCATGTGCTGTTTACTGCATTGCTTCAGGATCTTTTTTCTGCAACTCCCTGGATCCCCTCTTTTGTGAATACctatttgaaaagaaatattttctCTTTGATTTTCCGCCCTTGCGTTTACAAAGTGTGAATCCCCTTTGAGTTGTTCAACACTGCATTGAATCGACAGCTAGTAGTTTGAGAACTGTTCCTCCATTTTCAAAGTTTAGTGGGTACTTGTGCAAATGCTGTAACATTGCTGTGAATGAATTAAGGTGAAATTACCGGAGTGTTGAAATGTCAAAGGAAACAGGTGCAGATGATGAGTGACATTCCACAGCTTGTGGTGTAATTCAGAAGCGATTTGTAGGGCCTTCCCAGCCAAATCAACCTCACCAAGCAAAAGACCAggaaatattagaatataagtTGTTTGTCCAAACGATTTCTTTCTGTGCTGAGTGAATGGAGATGTAACACGGTTGGTTCAGGTCCGTTGACTCAGGGAACCCAACTGCATTGACATCTCTCATTCCCTCAGCTGCCCATCTCAACATTCAAACCCGAGCTGTTCTCAGCACCGCCCCCTGCTGTACTGTTTTTACATAGCACTACAGTTGCTAAACCTGCAGGACATCTGTGATGCCAATGCAGGGTGCTCTTCTTCATATACTTTGAGAGCCAAGTTTTACACCAGTGAAAACTCTATAGCACACATCCCCTGCACTGACCGAAGcgttcatatttttgaaaagttcTTAAACAGTGTTATTCCCCTATAAGTGCATCATGTAAAGTTAAAACAGGCATATCAAAAACTTAATTGTGCCCTATTTATGAATGTATTATATTGTCAagttggaagtatttttttcatgatttatttGACACTACATTACTTGTAACTACTTCTGCCTTTTTTCATCAtcaaggaaaaaaagaaacactttctACTGCCTGGTCTGTCTTCACCAGGTGGATTCTCAATGAACTCTTgatgtaggaaaaaaaaataatgacctgtatatttttcattgtgccaatttgtaacatattttctaagtgtatatttttcttaGAAAGTGATGTGAGGTCGTTCTTACTGTGGCTTTGTTCTTTTCCCTTTTCAGCAAGTGAAAAGGTTGCTAATTGCcatgatgttttctttctttctttttctttctctctctcttatttgttttttgtttgtttgttttaaagccaaaaattgaaaatactataaaaaataaataaaaaactattgtaaaggagagagaaggagagcaaGCTGTGACTCTTTGTTGAGAGTTTTTGTAATTGGACCAATCTTGTTGTAAGAGTGTTGTGCTctagttaaaatatatattaatttaaagataaaaaaagaaaccatgAAAACAGACAGTGGAACAATAACACTAATTTGTGATCTCATTGCTGTTTTATAGATTTTCATGTAAATTATTctagtattttgtttttgttgtatctgtcacaaaagttgaaatatttgtgatcaAGCCTGTATGGTGACAAATGTAATATTGGTAACTTGCTGAGTTTTGTAATCATGTTTAtggaataaatattaattaaaagagcTTTTGATCACT

Function

NR:

description
PREDICTED: protein KIAA2022 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240348.1 True 6906 mRNA 0.46 4 16379355 16389644

Neighbor

gene id symbol gene type direction distance location
tmem8b tmem8b,si:dkey-84j12.1,LOC107553610 coding upstream 127583 16144894 ~ 16251772 (+)
LOC122345915 hspb11,zgc:158640,LOC107746844,LOC107681463,LOC107719933,LOC107660270 coding upstream 290442 16087941 ~ 16088913 (+)
nos2a nos2a,LOC107553584,LOC107719931 coding upstream 295600 16076241 ~ 16083755 (+)
si:dkey-40c11.2 LOC107680639,LOC107552538,LOC107746841 coding upstream 364940 15985786 ~ 16014415 (+)
rhobtb4 rhobtb2a,LOC107552568,LOC107680668,LOC107746840,LOC107676653,LOC107718339,LOC107553600 coding upstream 400607 15951062 ~ 15978748 (+)
LOC122345769 zmat4a,zmat4,LOC107594996,LOC107587306 coding downstream 10788 16400432 ~ 16409920 (+)
LOC122346216 fam101a,LOC107687957,LOC107553832,LOC107684501,LOC107576363 coding downstream 154191 16543835 ~ 16554564 (+)
edil3a edil3a,edil3,LOC107685241,LOC107669516 coding downstream 646151 17035795 ~ 17162890 (+)
LOC122344732 LOC107570126,LOC107742021,LOC107694705,LOC107675326,LOC107715436,LOC107574130 coding downstream 839750 17229394 ~ 17253899 (+)
LOC122344734 col27a1b,LOC107720245,LOC107672548,LOC107587699,LOC107699687,LOC107731038,LOC107720196,LOC107552608 coding downstream 870508 17260152 ~ 17316269 (+)
G37155 NA non-coding upstream 282350 16095985 ~ 16097005 (+)
G37123 NA non-coding upstream 325347 16053032 ~ 16054008 (+)
G37047 NA non-coding upstream 460070 15918506 ~ 15919285 (+)
G37038 NA non-coding upstream 519252 15859759 ~ 15860103 (+)
G36993 NA non-coding upstream 555604 15821892 ~ 15823751 (+)
G37260 NA non-coding downstream 270877 16660521 ~ 16660743 (+)
G37286 NA non-coding downstream 398186 16787830 ~ 16812417 (+)
G37291 NA non-coding downstream 437481 16827125 ~ 16827476 (+)
G37308 NA non-coding downstream 499553 16889197 ~ 16889977 (+)
G37330 NA non-coding downstream 960947 17350591 ~ 17350922 (+)
G36640 NA other upstream 1658868 14718532 ~ 14720487 (+)
fgf5 fgf5,LOC107599194,LOC107746784,LOC107663393,LOC107661278,LOC107602014,LOC107744874 other upstream 1726444 14645945 ~ 14652911 (+)
mrpl1 LOC107663378,LOC107746869,LOC107752362,LOC107599195 other upstream 2029364 14347562 ~ 14349991 (+)
LOC122345214 NA other upstream 2041590 14333023 ~ 14337765 (+)
LOC122345142 NA other upstream 2074051 14300043 ~ 14305304 (+)
LOC122345998 LOC107718355,LOC107676655,LOC107746825,LOC107680877,LOC107553589,LOC107552586 other downstream 2153 16391797 ~ 16395562 (+)
G37227 NA other downstream 85064 16474708 ~ 16560732 (+)
G37228 ncor2,LOC107742750 other downstream 96976 16486620 ~ 16561741 (+)
LOC122344991 camsap1b,LOC107587696,LOC107672541,LOC107552625,LOC107720249,LOC107745551 other downstream 975205 17364849 ~ 17372859 (+)
LOC122345691 NA other downstream 1136380 17526024 ~ 17527444 (+)

Expression


Co-expression Network