fsta (fst,fsta,LOC107746798,LOC107599173,LOC107708632,LOC107602023,LOC107661233)


Basic Information

Item Value
gene id fsta
gene name fst,fsta,LOC107746798,LOC107599173,LOC107708632,LOC107602023,LOC107661233
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 15016899 ~ 15023456 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240362.1
GCAGCCTTCATTCAGCACTGCCTGAGTAAGAAGATTACTTTTGCACGGCTCGTCTAGATACTCTTTCTCTGTTTCAACATGCTAAGGATGCTAAAGCGCCAGCAGCTCCACCcgggaatgattttattactCTTATGGCTCTGTTATTTGATTGAAGATCAAAAAGTGCAAGCTGGTAACTGCTGGCTCCAGCAAGGCAAGAACGGAAGATGTCAGGTCCTCTACATGCCTGGGATGAGTCGAGAGGAATGCTGCCGGAGTGGGAGGCTCGGTACGTCTTGGACCGAGGAAGATGTGCCAAACAGCACATTATTCAGGTGGATGATCTTCAATGGCGGGGCTCCAAACTGCATACCTTGTAAAGAGACATGTGATAATGTGGACTGTGGCCCTGGgaagaaatgcaaaatgaacAGGAGGAGCAAGCCTCGCTGCGTCTGCGCCCCGGACTGCTCCAACATCACCTGGAAGGGGCCCGTGTGCGGCTCAGACGGGAAGACGTACCGGGATGAATGTGCCCTTTTGAAATCCAAATGCAAAGGGCACCCGGATCTGGAGGTGCAGTACCAAGGCAAATGCAAAAAGACGTGTCGTGATGTCATGTGTCCGGGAATCTCGACTTGCGTGGTGGACCAGACAAACAACGCATACTGCGTGACATGCAACCGCATATGCCCAGAGGTTTCGTCTCCGGATCAGTACCTGTGCGGCAACGACGGGATTGTTTACGCCAGCGCGTGCCATTTGAGGAGAGCCACGTGCTTGCTTGGTAGATCCATTGGAGTGGCGTATGAAGGGAAATGCATCAAGGCCAAGTCGTGTGACGACATCCAGTGCAGCGCAGGGAAGAAGTGTCAGTGGGATTCCAAGATGGGTCGCGGGCGCTGCGCCGTTTGCATAGAGACGTGCCCAGAAAGTCGATCGGAGGAGGCCGTGTGCGCCAGCGACAACACCACGTATCCCAGCGAGTGCGCCATGAAGCAGGCCGCTTGCTCTTTGGGGGTTCTCCTGGAGGTTAAGCATTCAGGATCTTGCAACTCCATTACTGAAGACCAGGAGGATGATGACGATGAGGACGACCAGGACTACATGGCTTATGTCCAATTATCACCTGTACTGGATGGATAAAGCACCATCAACCAGTGGAACAGTCCTAGGGCAAGGAATCATGTCCACACTGTACATATGTGtatgctaatttatttttcagagaaaaaagaaagaagtatACATGTAGTTCAGTCTGCTCgatgtttatttatacagtgttctgttttataatttatacatttacagtgTCTGGCTTACTTGTCTAtcatgttattttgttttcacttatgttgtctttcctttttttttttttttttttttattatgaccGAGAAATATATTTGTCCAAAGAGAAGCAGTGTTATTTATTGTGAGGTAAAATGCTATCATGTAAAGTGTGAGTCTTCTGCAAGCTGTAAATTGCATTCCCTGAGCTGTATAAACGCTTATCAGTGTCAATTCTGTATCACAGATGTTTATTTCACACATACTTGCATGTTAGcttgtgaatttatttattggaaaaaaaatggaaacgcataggaaaaaaaaaaaaaaaaaagtcactctttaatgtacatgtatatttttggttttgtttacagCTCAGTGTAACTGACCAAAGGGATTTTTCTTGAACGTTCTTCAATGTTTTTGTGATACGGTGCAGCAGGATAACATTGAAAATGAGCCGTTTCTCATATAGGAAAACCCCTGGTGATTCACTTGTACAAAATGCCGTCCTTCATCAACAGCAACAGTTTGACTTTTTGACAATAGGGCAGAAAAAGCAGTGGGTTATACTTGTTCGAGAAAACTGTGCCATGcaactttgtctttttttttttttttttttttttcttgccaaTATTCTGCTCTATATTGCTCTTGCGGAGCTAAAGAAAAGGTCATTAAGAGGACTCAGtatcaatatataaaacattcactttttcactgttttcactttgtcaaaatgcatttttattttcagacatctcaagataaaaaacaaaattcagttataaatatatagttttgtattttttatgtaaatgtcatatgtatatacaaagtTTGATGTATTTGTACAGATATTAAGagtgaaatcaataaaaaaaaatacttatcaAATGGTCACTGTGGTGTGGATATTATTAAGAACTGAGTTTTGCCGTTCACCCATCCATTTATTATTCTTCTCGTTATTTTGTAAGTAAATCAAAGCACCCTGGCTCCATTGCTTAAGCCTTAAAGGCGTtttataaaacgtttttaactGTCATTCTGAACCTACTgccaaaaaactattttttttagaactACATCACCATCGAGCCAAAATATTCCCATAAGGACATGACTTTAACTTTAGGCTTCTATCTCTTACAATCAGTTGTTAAACTCTCTACAAAGCTTGTTTTTACAGACAAACAGGTTCTCTTTTCACTCAGTTACTAGTGACAAAAATCAATCAAACACACAAGCCTGCTCTATAGCgataaagctgaaatttcacTGCATTAGTCTGACCTCACACTGCACTTTCCTAATATGCAAAGCTCCTCGTGAAGTTATCTGGTGCAGCTTTGCTCTGTTCTCCGTTTCtgaaacaaatgtataaaatcacACAGGACTTTATAAGGAGACGGTTTAACGTCCAGATCAATTGGGTTAACACTGTCACGTCAATAACTCATTCTGACTTTAAAGACTTAAAACATGAACCAGGTTTTAATGGTTCCAGGCAGTGATGTAAAATGAACATGGAAAGTGTAGTACCAGACTGTGCTAATGTGCTAGCAGAGATGACAGAGTAAAAACGGTCACTGCTTTTTCAATTGAAAGTCATTTGAAGTAGGCAGGTGTTTTACTCATCTGGGCTCATCCCTGGAGGAGCATGAGAGTAAACATATCTAACCGCGTTCGGTCTTTGAAGCTTGACATTTACCTCATCCTCCCGTTTCAGAAACATTAACACTAAACTGTCTTCAAGAGGGTTTGGAGGGTAGAAAAACGAACCACCTGACAAGAAGAATTATTTTCTGAGGAAACAGAGACATT
>XM_043240363.1
GCAGCCTTCATTCAGCACTGCCTGAGTAAGAAGATTACTTTTGCACGGCTCGTCTAGATACTCTTTCTCTGTTTCAACATGCTAAGGATGCTAAAGCGCCAGCAGCTCCACCcgggaatgattttattactCTTATGGCTCTGTTATTTGATTGAAGATCAAAAAGTGCAAGCTGGTAACTGCTGGCTCCAGCAAGGCAAGAACGGAAGATGTCAGGTCCTCTACATGCCTGGGATGAGTCGAGAGGAATGCTGCCGGAGTGGGAGGCTCGGTACGTCTTGGACCGAGGAAGATGTGCCAAACAGCACATTATTCAGGTGGATGATCTTCAATGGCGGGGCTCCAAACTGCATACCTTGTAAAGAGACATGTGATAATGTGGACTGTGGCCCTGGgaagaaatgcaaaatgaacAGGAGGAGCAAGCCTCGCTGCGTCTGCGCCCCGGACTGCTCCAACATCACCTGGAAGGGGCCCGTGTGCGGCTCAGACGGGAAGACGTACCGGGATGAATGTGCCCTTTTGAAATCCAAATGCAAAGGGCACCCGGATCTGGAGGTGCAGTACCAAGGCAAATGCAAAAAGACGTGTCGTGATGTCATGTGTCCGGGAATCTCGACTTGCGTGGTGGACCAGACAAACAACGCATACTGCGTGACATGCAACCGCATATGCCCAGAGGTTTCGTCTCCGGATCAGTACCTGTGCGGCAACGACGGGATTGTTTACGCCAGCGCGTGCCATTTGAGGAGAGCCACGTGCTTGCTTGGTAGATCCATTGGAGTGGCGTATGAAGGGAAATGCATCAAGGCCAAGTCGTGTGACGACATCCAGTGCAGCGCAGGGAAGAAGTGTCAGTGGGATTCCAAGATGGGTCGCGGGCGCTGCGCCGTTTGCATAGAGACGTGCCCAGAAAGTCGATCGGAGGAGGCCGTGTGCGCCAGCGACAACACCACGTATCCCAGCGAGTGCGCCATGAAGCAGGCCGCTTGCTCTTTGGGGGTTCTCCTGGAGGTTAAGCATTCAGGATCTTGCAACTCTACCATGTATTCTCCCATATAGCCATTACTGAAGACCAGGAGGATGATGACGATGAGGACGACCAGGACTACATGGCTTATGTCCAATTATCACCTGTACTGGATGGATAAAGCACCATCAACCAGTGGAACAGTCCTAGGGCAAGGAATCATGTCCACACTGTACATATGTGtatgctaatttatttttcagagaaaaaagaaagaagtatACATGTAGTTCAGTCTGCTCgatgtttatttatacagtgttctgttttataatttatacatttacagtgTCTGGCTTACTTGTCTAtcatgttattttgttttcacttatgttgtctttcctttttttttttttttttttttattatgaccGAGAAATATATTTGTCCAAAGAGAAGCAGTGTTATTTATTGTGAGGTAAAATGCTATCATGTAAAGTGTGAGTCTTCTGCAAGCTGTAAATTGCATTCCCTGAGCTGTATAAACGCTTATCAGTGTCAATTCTGTATCACAGATGTTTATTTCACACATACTTGCATGTTAGcttgtgaatttatttattggaaaaaaaatggaaacgcataggaaaaaaaaaaaaaaaaaagtcactctttaatgtacatgtatatttttggttttgtttacagCTCAGTGTAACTGACCAAAGGGATTTTTCTTGAACGTTCTTCAATGTTTTTGTGATACGGTGCAGCAGGATAACATTGAAAATGAGCCGTTTCTCATATAGGAAAACCCCTGGTGATTCACTTGTACAAAATGCCGTCCTTCATCAACAGCAACAGTTTGACTTTTTGACAATAGGGCAGAAAAAGCAGTGGGTTATACTTGTTCGAGAAAACTGTGCCATGcaactttgtctttttttttttttttttttttttcttgccaaTATTCTGCTCTATATTGCTCTTGCGGAGCTAAAGAAAAGGTCATTAAGAGGACTCAGtatcaatatataaaacattcactttttcactgttttcactttgtcaaaatgcatttttattttcagacatctcaagataaaaaacaaaattcagttataaatatatagttttgtattttttatgtaaatgtcatatgtatatacaaagtTTGATGTATTTGTACAGATATTAAGagtgaaatcaataaaaaaaaatacttatcaAATGGTCACTGTGGTGTGGATATTATTAAGAACTGAGTTTTGCCGTTCACCCATCCATTTATTATTCTTCTCGTTATTTTGTAAGTAAATCAAAGCACCCTGGCTCCATTGCTTAAGCCTTAAAGGCGTtttataaaacgtttttaactGTCATTCTGAACCTACTgccaaaaaactattttttttagaactACATCACCATCGAGCCAAAATATTCCCATAAGGACATGACTTTAACTTTAGGCTTCTATCTCTTACAATCAGTTGTTAAACTCTCTACAAAGCTTGTTTTTACAGACAAACAGGTTCTCTTTTCACTCAGTTACTAGTGACAAAAATCAATCAAACACACAAGCCTGCTCTATAGCgataaagctgaaatttcacTGCATTAGTCTGACCTCACACTGCACTTTCCTAATATGCAAAGCTCCTCGTGAAGTTATCTGGTGCAGCTTTGCTCTGTTCTCCGTTTCtgaaacaaatgtataaaatcacACAGGACTTTATAAGGAGACGGTTTAACGTCCAGATCAATTGGGTTAACACTGTCACGTCAATAACTCATTCTGACTTTAAAGACTTAAAACATGAACCAGGTTTTAATGGTTCCAGGCAGTGATGTAAAATGAACATGGAAAGTGTAGTACCAGACTGTGCTAATGTGCTAGCAGAGATGACAGAGTAAAAACGGTCACTGCTTTTTCAATTGAAAGTCATTTGAAGTAGGCAGGTGTTTTACTCATCTGGGCTCATCCCTGGAGGAGCATGAGAGTAAACATATCTAACCGCGTTCGGTCTTTGAAGCTTGACATTTACCTCATCCTCCCGTTTCAGAAACATTAACACTAAACTGTCTTCAAGAGGGTTTGGAGGGTAGAAAAACGAACCACCTGACAAGAAGAATTATTTTCTGAGGAAACAGAGACATT

Function

symbol description
fsta Predicted to enable activin binding activity. Acts upstream of or within determination of dorsal identity; embryonic organ morphogenesis; and midbrain development. Predicted to be active in extracellular space. Is expressed in several structures, including central nervous system; head; mesoderm; neural tube; and ovary. Human ortholog(s) of this gene implicated in polycystic ovary syndrome. Orthologous to human FST (follistatin).
fst Enables activin binding activity and activin receptor antagonist activity. Involved in hematopoietic progenitor cell differentiation; negative regulation of activin receptor signaling pathway; and negative regulation of transcription by RNA polymerase II. Acts upstream of or within positive regulation of hair follicle development. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Implicated in polycystic ovary syndrome.

NR:

description
follistatin precursor

GO:

id name namespace
GO:0043049 otic placode formation biological_process
GO:0048263 determination of dorsal identity biological_process
GO:0009994 oocyte differentiation biological_process
GO:0030901 midbrain development biological_process
GO:0005576 extracellular region cellular_component

KEGG:

id description
K04661 FST; follistatin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240362.1 False 3111 mRNA 0.41 6 15016899 15023456
XM_043240363.1 True 3134 mRNA 0.41 6 15016899 15023456

Neighbor

gene id symbol gene type direction distance location
hspb3 hspb3,LOC107746796,LOC107599178,LOC107744878,LOC107602000 coding downstream 96960 14918926 ~ 14919939 (-)
snx18a snx18,snx18a,LOC107599175,LOC107661231,LOC107746794,LOC107744868,LOC107602026 coding downstream 99135 14906584 ~ 14917764 (-)
si:dkey-193c22.1 si:dkey-193c22.1,LOC107661268,LOC107602027,LOC107599182,LOC107744872,LOC107746871,LOC107736603 coding downstream 136826 14876022 ~ 14880073 (-)
wdfy3 wdfy3,LOC107681281 coding downstream 141422 14812557 ~ 14875477 (-)
cds1 cds1,LOC107602031,LOC107663388,LOC107744867 coding downstream 206654 14795349 ~ 14810245 (-)
isl1a isl1,LOC107661270,LOC107708623,LOC107599171,LOC107602011 coding upstream 98540 15121996 ~ 15128172 (-)
parp8 parp8,LOC107746800,LOC107661236,LOC107708633 coding upstream 150932 15174388 ~ 15199837 (-)
golph3a golph3,LOC107681169,LOC107552603,LOC107746803,LOC107602021 coding upstream 245220 15268676 ~ 15279272 (-)
mtmr12 mtmr12,LOC107746804,LOC107552602,LOC107708634,LOC107602020 coding upstream 256758 15280214 ~ 15292882 (-)
eef2l2 eef2l2,LOC107681082,LOC107746808,LOC107552597,LOC107676651,LOC108414462,LOC107708638,LOC108255789 coding upstream 427568 15451024 ~ 15457371 (-)
G36714 NA non-coding downstream 111278 14905385 ~ 14905621 (-)
G36708 NA non-coding downstream 135834 14880865 ~ 14881065 (-)
G36696 NA non-coding downstream 317946 14698736 ~ 14698953 (-)
G36631 NA non-coding downstream 364506 14652095 ~ 14652393 (-)
G36602 NA non-coding downstream 528171 14485814 ~ 14488728 (-)
G36811 NA non-coding upstream 145591 15169047 ~ 15169358 (-)
G36967 NA non-coding upstream 538266 15561722 ~ 15562078 (-)
G36968 NA non-coding upstream 538692 15562148 ~ 15562363 (-)
G36969 NA non-coding upstream 540642 15564098 ~ 15565262 (-)
G36986 NA non-coding upstream 690219 15713675 ~ 15713975 (-)
LOC122345141 LOC107752369,LOC107661250,LOC107567461 other downstream 714518 14292063 ~ 14302381 (-)
znhit1 znhit1,LOC107752359,LOC107661214,LOC106567874 other downstream 734279 14279674 ~ 14282620 (-)
rnf214 LOC107663407,LOC107746393,LOC107599207,LOC107596114,LOC107734124,LOC107661199,LOC107599223 other downstream 960194 14040982 ~ 14056705 (-)
tmprss13b LOC107746439,LOC107663381,LOC107599230 other downstream 1007363 14001934 ~ 14009536 (-)
LOC122345901 NA other downstream 1168829 13845403 ~ 13848070 (-)
pdzd2 pdzd2,LOC107746802,LOC107681406,LOC107661237 other upstream 182495 15205951 ~ 15264945 (-)
zfr zfr,LOC107746805,LOC107681158,LOC107552600,LOC107602019 other upstream 270400 15293856 ~ 15308440 (-)
npr3 LOC107681138,LOC107746807,LOC107552598,LOC107602007,LOC107708637,LOC107661273 other upstream 326560 15350016 ~ 15367413 (-)
alkbh2 alkbh2,LOC107746816,LOC107552593,LOC107676640 other upstream 544563 15568019 ~ 15578967 (-)
cenpv cenpv,LOC107718355,LOC107676655,LOC107746825,LOC107680877,LOC107553589,LOC107552586 other upstream 680077 15703533 ~ 15709430 (-)

Expression


Co-expression Network