pheta1 (LOC107653115,LOC107725116,LOC107594559,LOC107550295,LOC107723306,LOC107687307)


Basic Information

Item Value
gene id pheta1
gene name LOC107653115,LOC107725116,LOC107594559,LOC107550295,LOC107723306,LOC107687307
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 549801 ~ 555622 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240366.1
TGACCGTCAGTCAGGAAAGGAAGAATGAAGGGAGGAAAACTATCCGCTGGCGTCCAATAACACGCTCAAAAGATCGGAAATGGGATAGAGATGTTCGGCAAGGGCTGTTTTGATTGACTGTTGGAAGCGTGAAGGGCTCACAGAAGAGCTTTGAAAGAAAGagaccataatgaaattaaatgagagGAGCGTGGCGCATTATGCCACATGCAACTCTCCTCCAGACAAGACGGGCTTCCTCTTTAAGAAAGGGGAACGGAACACGGCCTATCACCGCCGCTGGTTTATTCTGAAGGGCAACATGCTGTTCTACTTCGAGGAGAGGGAAAGCCGAGAGCCGATTGGTGTCATCGTCCTGGAAGGCTGCACGGTGGAGCTCTGCGAGTCTGAATCCGAAGAGTTTGCTTTCGCCGTCAAATTCGACTGCGTCAAAGCGAGGGTCTACAAGATGGCAGCGGAGAACCAGGCCGCTATGGAATCGTGGGTCAAGGCTCTGTCCCGGGCGAGTTTCGACTACATGCGGCTGGTCGTGAAGGAGCTGGAGAGGCAGCTGGAGGAAGTGCAAGAAGAAGCCAGATCTTCGCAAGCCAAAAGCAAGCAGAAGAAGCACCAGACGCAATCGCAAGGAGCAGCGAGCTTCCAACCCGCGGCCGCCATTACGGGGCCTTCGCTGGAAGGGGTGTCTGGCAGAGAAAACGGGGTGTCTTGGAGTAAGCCCACCGGCGTGCCGAACGGGGTCAGCGAGGGCTGCGTCTGGGAGGGGGACTGCAGCGGGAGGGGGGATGGAGTCAAACCGCCTCCGGTACCTCCACGGAGGAAGACCAACGGCGGCTCACTCGAGAGCCCCGTTTCACCCGGCACAGGCTGCTTCTCCAAACTGCACGACTGGTACGGCAAGGAGGTGGCTGAACTGAGAATAGAATGGCTGCAGAGCCAGTGAATGAGACTCGAAACATGCATTTGCACAAAAGACGTGTTTAAGTGCAATCTCGGTTGAAGACACAATCGGTCAAATTCATCTAAAAACAAAGAGAGCAATAGAATGATAATCACTCGTCCGCTGTTACGCTAAACAAGACCTAGGCGGTTTTTAGAGGAACTTTGtgtaatttactcaccccctcatgtctttccaaacctcgCTGGAAAATCTAGTTCTTAAATACGGGAAGGTACAGTAAATCTTATGATAAAGAAAACAGCAGTATTTACctgcatatatttttactaaagCGTTTGAAACAAATAGTGCAATATTTTATGCAAGTGcagtgtttttcattaaatatcattaaaaaaaaaaaagtatgcaaaaaATGTACTCGTCCTATTGCATCTAAGATGTACGTAGATGAGTTTTGGAGAATtgtagcattgcatcatttACTTATCagtgtgaatgggtgccgtcagtgtccaaacagctgattaaaaacgtAATCTATTATAATGCCCCTCTCACATCAAAAGCCACCGATGCTTTGTTTTTCGTTGTTTGGGATTGTTTTTGactgcatatttctctcctgattcagactaGATGATTTTTACTTGTGGTTTATTGTAAGGTTTTTATCAGCTGgtcgacggcacccattcaagtttcattggtgagcaagtgatgaaatgcaaaatgtttccAAATCTATTTGAACGAGCAAACATTTACATCTTGGATTGCCTGAGGgcgagtcatttttttttaagcaaacttTGTTTTTTAGATTAACGATTcctttaatacaataaaaaaacattgcaattcCTTGAACTTTGTTGTGGGCTAACCCTATATGAATCATTGACTGgtgcttttaaataattcattacacagttttaaaatgaaaacatttctacaATGTTTGCAACTTCTATTTAAATAAGAGAtggagagaagagaaaataatattaacattccTTTACTTtgcaaatctaaaataaatctaatgGCTTGAAACCTAattgcaaaattaattaaaatcttcAGTAATCTTAATTACAGTGTTGCATTGttgaattaaatatgtttagcaaactcttcagtgctttgttcctttaaaaaaaaataaataaatcaatggaCACTGGTTCTGTCCAggttaaaaaatgacaaaaagcaccACATTAAAGTATCATAAAGCTAGGTTTACGTCTTACAAACTGATAATAGCTTAGTGTTAGGAGACGCCTAACATTTATGCTTTTGCATGTTTCTCAAGGTTTGACGTTATTATGTCAAACATTGGCTTCTTGCATCTTGTTGCAATTAAAACTTGCATGATGTGTCTTGATGCAAGAGTTTAGGAgaaaagtacaatttttaaatatgccaCACAAAGATTTATGACTTTACAATACTTAGATTTGGTGCACAGGTCGTATGGACTACCTATGAACGAGGGGGACTTTTTGTGCTTGTTCAAGCAAATAATATGGGTTTGAAGCGACATGAGTACGAGTAAAtgatgctgttttcttttttcgtaTGAACTTTCATTTAGGGATTTTCCTAGAACCTCACTCTTagcaaattagtattttttttattagaatttcttttttattattgcgtAACGACACAAATTTCTTTCTTCGCaatgtttgttttgataaaGAAAAGCGGTACCGGGTCCCTGTTTTCAGATTGACGGACACTTGAATGTAAGTATTATAGTGCCAAAGCTGGTCTGTGGcaatttgtaatcattttacaatataaattagaaaaaaaaatgactttacaGCACAAAAAGTTTAATGTATCTCCAAATATATGAAttttatgctgtattttaagAAATCTACAATCCAACCTGCCAAAAACGTAATTGCCAAAATGATTTCTAACTTTTAAGTATGTAATAGTGTCTCAAACAATGGACTTGTTAGCCAGCTAATATGTAATCTTCCattgatgactttttttttaataagcatcTATAATACACCgttatttaattttagggtTAATGCATCATATGTTATCATTTTTGCCAATAAACTTGTTAATGCTTTGCCTTTTAAAACTGACCAATTATAGTCATCATACTGTGACCAACATTTAATAcgttatagaatatatatatatatatatatacagacagcTTATTAATGGCTTttgtaaatgcatcttaatGGTACAGATTGTGTGCAATCATATAATCATATTTGGGGATATTTTACCTATAGTGACACTAAATGGGAGACGTGGCTGGCCAACCGCAGTGCCTTCAGATTTCATCCAAAACACTGTGTTAGATTCCACAATGCAAATAGTAAAACATCAGCGAATAAGAGATGAATGTGGATAAACAGCTTGTGTATTAACCAGGTACTGGTAGTAAAATGACAACCACTGCAATAAAGTTAACCTGTTGCTGAATGAGGTTGTATTGCAATAACCAGGTCTGAATGTTTGGTCGAAACGGCCTTTGAAAATTACATTGGatagaatattaaatatgaaggAAGCAAGaatgtatgtttaatgttttcaaataaagatGGGCAtcttcataaaata

Function

NR:

description
sesquipedalian-1

GO: NA

KEGG:

id description
K23791 PHETA; sesquipedalian

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240366.1 True 3523 mRNA 0.39 3 549801 555622

Neighbor

gene id symbol gene type direction distance location
sh2b3 sh2b3,LOC107594562,LOC107550292,LOC107704923 coding downstream 757 513432 ~ 549044 (-)
gak gak,LOC107704343,LOC107667379 coding downstream 37922 487044 ~ 511879 (-)
lrp13 LOC107725159,LOC107594583,LOC107704910 coding downstream 138708 399992 ~ 411093 (-)
si:ch211-12e13.10 NA coding downstream 150118 398419 ~ 399683 (-)
LOC122345880 NA coding downstream 176983 371671 ~ 372818 (-)
ier3 LOC107723299,LOC107667686,LOC107653130,LOC107567455,LOC107751423,LOC107550277 coding upstream 37881 593503 ~ 594649 (-)
tor4ab LOC107653139,LOC107751425,LOC107723309,LOC107550278,LOC107567459,LOC107667676 coding upstream 50748 606370 ~ 613827 (-)
LOC122346115 LOC107751416,LOC107579531,LOC107653145,LOC107550279,LOC107667655,LOC107723311 coding upstream 61158 616780 ~ 622514 (-)
chek2 chek2,LOC107653214,LOC107667648,LOC107567453,LOC107550275 coding upstream 94451 650073 ~ 658193 (-)
rtn4r rtn4r,LOC107704387,LOC107599164,LOC107573425,LOC107728899,LOC107667279 coding upstream 342487 898109 ~ 968753 (-)
G32201 NA non-coding downstream 64031 484962 ~ 485770 (-)
G32193 LOC107594561,LOC107725071,LOC107725113,LOC107704326,LOC107723313,LOC107667397 non-coding downstream 66392 477761 ~ 483409 (-)
G32187 ugt2b3,ugt2b1,LOC107667397,LOC107725113,LOC107667542,LOC107723313 non-coding downstream 69920 458480 ~ 479881 (-)
G32230 NA non-coding upstream 135796 691418 ~ 691700 (-)
G32239 NA non-coding upstream 148612 704234 ~ 704604 (-)
G32245 NA non-coding upstream 162515 718137 ~ 718410 (-)
LOC122344906 LOC107676118 non-coding upstream 264568 820190 ~ 822829 (-)
G32275 NA non-coding upstream 322288 877910 ~ 879142 (-)
kcnv2b atp5ib,atp5i,atp5ia,kcnv2b,LOC107703581,LOC107725101,LOC107704252,LOC107594594,LOC107723293 other downstream 161923 382052 ~ 387878 (-)
rictora rictora,LOC107704198,LOC107658248,LOC107567655,LOC107750288,LOC107594576,LOC107725140 other downstream 288130 239951 ~ 261671 (-)
G32104 LOC107725162,LOC107594575 other downstream 513453 35777 ~ 36348 (-)
G32103 LOC107725162,LOC107704185,LOC107594575 other downstream 515084 33779 ~ 34717 (-)
G32101 LOC107594575,LOC107725162,LOC107704185 other downstream 525852 20139 ~ 23949 (-)
ddr2l ddr2l,LOC107704361,LOC107725118,LOC107550294,LOC107723312,LOC107667359,LOC108444179 other upstream 1032 556654 ~ 583095 (-)
wdr31 wdr31,si:ch73-266o15.4,LOC107653158,LOC107667323,LOC107751417 other upstream 66892 622514 ~ 631126 (-)
castor1 gatsl3,LOC107755828,LOC107726730,LOC107704487 other upstream 756982 1312604 ~ 1336187 (-)
lrrc74b lrrc74b,LOC107755819,LOC107667596,LOC107599620 other upstream 786984 1342606 ~ 1354414 (-)
ypel1 ypel1,YPEL1,ypelc,ypel2b,LOC103374080,LOC106586007 other upstream 1117402 1673024 ~ 1694286 (-)

Expression


Co-expression Network