LOC122345880


Basic Information

Item Value
gene id LOC122345880
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 371671 ~ 372818 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240376.1
ATGAGAGAAGGTtgtcatataaaaacacaagcgCAACTGGGTGATATAGGATATCAGCGACGCAGCATATGGTCatatgtgaaaaagaaaaaaggGTCAGAATCAGCTATGACAACTTTAATCTTGGGTTTCAGTCTCCTGTCTGCAGCCTGTCTGAGTCTAGCTGTTCCTGCAGAGAAAACCAGCAGGAAGACAAGAGATCTGAGTTTTGAGGAATTCTATCGACCAGGCCTTCCAGTTCAGTCAGCGCCTTCAGTTTATTTTCTCGTGCCCGTGGGTCAGTACGGCGGACAGCAGCTTACTCCCTACAGATTCCCGAGTCTCTTGCGCCCCTACCAACCTGCTTTCCACCCGTATCCGTATCAACATCCGTATCAGCATCCGTTTCAACATCCATACCCACTCCCTCACGCTCACGCACATCCACACGCCATGGCAGTGCAGCCGCCCATCATCGTGCTGGAGAGAGTCCCCTCCGCCGCCAGCACCGCCGAGCCTCCCGCCACAGGCGCTCCTTCTGTGGGAGGATGA
>XM_043240377.1
ATGAGAGAAGGTtgtcatataaaaacacaagcgCAACTGGGTGATATAGGATATCAGCGACGCAGCATATGGTCatatgtgaaaaagaaaaaaggGTCAGAATCAGCTATGACAACTTTAATCTTGGGTTTCAGTCTCCTGTCTGCAGCCTGTCTGAGTCTAGCTGTTCCTGAATTCTATCGACCAGGCCTTCCAGTTCAGTCAGCGCCTTCAGTTTATTTTCTCGTGCCCGTGGGTCAGTACGGCGGACAGCAGCTTACTCCCTACAGATTCCCGAGTCTCTTGCGCCCCTACCAACCTGCTTTCCACCCGTATCCGTATCAACATCCGTATCAGCATCCGTTTCAACATCCATACCCACTCCCTCACGCTCACGCACATCCACACGCCATGGCAGTGCAGCCGCCCATCATCGTGCTGGAGAGAGTCCCCTCCGCCGCCAGCACCGCCGAGCCTCCCGCCACAGGCGCTCCTTCTGTGGGAGGATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240376.1 True 531 mRNA 0.53 4 371671 372818
XM_043240377.1 False 489 mRNA 0.53 3 371671 372818

Neighbor

gene id symbol gene type direction distance location
adamts12 LOC107725168,LOC107704241,LOC107594580,LOC107750303,LOC107658289,LOC107567650 coding downstream 31940 316841 ~ 339731 (-)
fgf10b fgf10,LOC107705049,LOC107725110,LOC107594591,LOC107658296,LOC107567653 coding downstream 58643 301638 ~ 313028 (-)
mybbp1a mybbp1a,LOC107658206,LOC107704885,LOC107594578,LOC107567654,LOC107750298 coding downstream 72290 287133 ~ 299381 (-)
paip1 paip1,LOC107725119,LOC107704219,LOC107658232,LOC107567649 coding downstream 85373 278951 ~ 286298 (-)
c5h5orf34 LOC107750289,LOC107658216,LOC107567649 coding downstream 93387 273168 ~ 278284 (-)
si:ch211-12e13.10 NA coding upstream 25601 398419 ~ 399683 (-)
lrp13 LOC107725159,LOC107594583,LOC107704910 coding upstream 27174 399992 ~ 411093 (-)
gak gak,LOC107704343,LOC107667379 coding upstream 114226 487044 ~ 511879 (-)
sh2b3 sh2b3,LOC107594562,LOC107550292,LOC107704923 coding upstream 140614 513432 ~ 549044 (-)
pheta1 LOC107653115,LOC107725116,LOC107594559,LOC107550295,LOC107723306,LOC107687307 coding upstream 176983 549801 ~ 555622 (-)
G32150 NA non-coding downstream 19592 350967 ~ 352079 (-)
G32086 NA non-coding downstream 167135 162490 ~ 204536 (-)
G32102 NA non-coding downstream 345779 25514 ~ 25892 (-)
G32100 NA non-coding downstream 354156 16470 ~ 17515 (-)
G32099 NA non-coding downstream 356366 12703 ~ 15305 (-)
G32177 NA non-coding upstream 58812 431630 ~ 431890 (-)
G32186 NA non-coding upstream 83299 456117 ~ 482271 (-)
G32187 ugt2b3,ugt2b1,LOC107667397,LOC107725113,LOC107667542,LOC107723313 non-coding upstream 85662 458480 ~ 479881 (-)
G32191 NA non-coding upstream 92246 465064 ~ 470468 (-)
G32194 LOC107667397,LOC107723313,LOC107572263,LOC107725113 non-coding upstream 93217 466035 ~ 471546 (-)
rictora rictora,LOC107704198,LOC107658248,LOC107567655,LOC107750288,LOC107594576,LOC107725140 other downstream 110000 239951 ~ 261671 (-)
G32104 LOC107725162,LOC107594575 other downstream 335323 35777 ~ 36348 (-)
G32103 LOC107725162,LOC107704185,LOC107594575 other downstream 336954 33779 ~ 34717 (-)
G32101 LOC107594575,LOC107725162,LOC107704185 other downstream 347722 20139 ~ 23949 (-)
kcnv2b atp5ib,atp5i,atp5ia,kcnv2b,LOC107703581,LOC107725101,LOC107704252,LOC107594594,LOC107723293 other upstream 9234 382052 ~ 387878 (-)
ddr2l ddr2l,LOC107704361,LOC107725118,LOC107550294,LOC107723312,LOC107667359,LOC108444179 other upstream 183836 556654 ~ 583095 (-)
wdr31 wdr31,si:ch73-266o15.4,LOC107653158,LOC107667323,LOC107751417 other upstream 249696 622514 ~ 631126 (-)
castor1 gatsl3,LOC107755828,LOC107726730,LOC107704487 other upstream 939786 1312604 ~ 1336187 (-)
lrrc74b lrrc74b,LOC107755819,LOC107667596,LOC107599620 other upstream 969788 1342606 ~ 1354414 (-)

Expression


Co-expression Network