nexmifa (si:dkey-114c15.7,LOC107597238,LOC107672487,LOC107733230,LOC107592265,LOC107748635)


Basic Information

Item Value
gene id nexmifa
gene name si:dkey-114c15.7,LOC107597238,LOC107672487,LOC107733230,LOC107592265,LOC107748635
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 11389320 ~ 11399607 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240381.1
CCTCAGCGCGCCGCCGTGCGAAATATGGGGGCGCGCTCTTTATGGCAGGTCTCAAAAGAGGGGGAGCAGCAGCGCACGAGCGCGCCGTCGTTGTCAGGGACGGACGGGGTACAGCTGGGAAAAACACATCCTCACGCACGCACACCCCCGTCTCCGTTACGCACGTACAtaaggcaaaaacaaaagcgACTCTAAAGGAGGAGAGAGCGGAGCGCGAGCATGCGGCGAGGAGCAGGCGCTGCAGCAGACCTTTGTTTGTTTCCTGGAAACCCTGGAGCGCGAGGGAATAAAATGGAGTGGTAAGGGGCTCCGAGGCGCGAGAGGCGCGTCCACCTGCTGCTACCGGGGAGGCAGTCAGAGAGGGCAAACATGCTGAGACCGCTGCATTGAAGGGGGTTacgaaaacaacaacaacaactgcgTATGACAACATTCTGCACGCCGAGCGATCAAACGGAGTCTTTAAAGCGGGCGGGACGGGTGTAACGGGAGGCTGGACAGTTGTAATTATGTTAGTGAGAGAGAGATTCAGTTCAGACTGATGGATGTTCTACAGGAGTCCCGATACTCAGGGGCAGATCGCAGCCCCTGCCCAAGAGACGTTAGTGAAAATGaaTCACATGACCCGTTGGCAGATGTGTCACATGATCTAAGGCGCTGTGATGACATTGCTCCTGCGGCGCTGTCCCTGCCCTCCCTCTGTGGCCAGAGTCAGACCTCTGAAGGTCCTCTTAGCCCAGCTGACCTGCATGATGGGTCTGTCTCCAACACCacctctctgtcctctctctcttcattttcctctctttcctccctttcgtctctctcttctgtgccctgttccaaacctgtgacGCCCTGGTCTGTGCCGCAGACCTGTGACAGGTCGTCCCTCTCTAACATGGACTCCAGGGGCGGAGACTGCCTTAGCTGTCTGATCCCCAAAAATCAGACAGAACCGGAATCCTGTGAGTCCGTACTCGGCTTTGCCAGCATCAATTTGCAATGCCTTGGCCCCGCCCCCAGCGCAGGTCGCTATGGTGACCAGGTTCTATCAGACCAGCTGCTCAGTGGCCCTGCCCATCCAGCTGTTACCAATGAGGGGGCTGAAGAAGGGAGGTCGATGCAGGAGAGCGAATCAGATGAGGACCCTGCATCCAGGAGCATATACGAAGGTCTAGGAGAGGAGGCACAGGACTGGAGCTGTCTAGAGACTCTCATCAGTGAGAGTCGTATGGAGCTATTGGACTTATGCTCCCGCAGCGAACTTGCAGTAAATCTGTTCTGTGAGGAAGATGTGGAGAATTACATGTTTCAGGAGGAGGAGACTTCACTTGGCACTGATGTCTGCTCACTCAAGATACGCTATGAGTCCTATCAGGATGGAGTGCAGGAGAGGAGTGAGTCTGCCTTACAGGATGAATCTCAGCTAGGTTTCTTTCCTAGCTTACCTTGCAGTAGAAAAGAGGGGCCAAAAGAGAAACCAGACCAATCCGCTGAGATTAAGGCTGATGACCACGTGACCCCCACTATTAGCCCAGACAGTAACTTTCTTTTTGACCTCAGTAACTCTCCAGAAGATTCCGGTGAATTCAGTGATGACAGCTCTTGCACAGGCTCCCCAGACCATGGGCTCTCCCTTCGCCATGGCCGCTTGTCCAGAGAAAACTCTAGCTCCTCCAGCCAGCTAAGCTACCGCCTCAGAGCCAAGAGGAAGGTGGCCTACCGAGAAGACTACTTGTATGATGTGGACTCAATAGAAAGtgagaaaaatgcagaaaaacgaGAAAAAACCCCTGCTGGGTTTAAGAAAGAGCGTGATGACGACTGGTGCCCAAAGAAGAGGCGGCGGTCAAGTAGGAAGGACCCACctgtcattataaaatatataatcattaatcGTTTTAAAGGCCAGAGGCACATGAGAGTGCGTCTGGGGCGAGTCGACCCATCACCTGCTGTGGTCTGTCTGAGTCCAAATGCTCTGCTTCACTATGAGAGACTTGCACCATTAAAAGCATACTggcaggaaagagaaagagagcagcaGGAGAAGAATAGATTAACAGCAGCAGAAACAACCAAACGTCTCAATGGCTGCAAAAGACCAAGCACTGCTCCCAAACGCAAGCACAGGATGGCCAGACTCAGGATCCAGCAGATCCACACCGTACAGACTTCCCTCCCCAGCCAAACTATAGTGGTCCCCATCCACAATCAACCAGGGGGGACCGAATCCCTGAAAAGCACAGAGGAACCAAAAGAGGACATTACCTCCGTTACACACACTGCCAGGGCAAAAAGCAGAAcacaggagagagaggaaagaagaAAGGCAGGCAAAACAGGGAAGATAAAGAAGTTCAAAAGTGAAGCAAGACTTCGGTTGAAAAAGTTAAAAGAGGCTGAAACACAGGAAGTCCCAGAATCCTCTGAGATTGAGCAGTGCAGCCCATGTTTACCAGAAAACCTTAGTAACTCTTTGGAAGGTAATGCCACAAATGAAACCTCCAGTAATGACCCTGAAAAATGCACTTTGACCCCTGCTGCTCCGGGGACTGATGGAAATGCTGAACTCCTTCCCGGGGGTTACCTGCAAACACTTCTTGAAGCCTCTGAGTCATCAAGCACTGCTAACATTAACTATTTTCATTCAGGGCTACAGAATCCCACACTTCAGCCAGTCCAGAGCTGTgttctctctcctccctctgAATCAGAGCTGCCTCACTCTCCTCCACCTATGAACCACGGGCCCCACCACACGCATTATACTGAGCCAAACCTTACTGAACCAAACCAGCCCATTTCATGGCCATCCCAACAATCTGCTGAACAGCTGCCCTTCTCCCCAGACATCCCAACCCAGTCTCCAATGATGCCATCGGGCTTTCCCACACCGTTGCCTGTGTTAGCAGGGGATAGCACAAATGTCACAGGCTTTGGCCAAGTGTCTCTGTCAGGGTGCAGAGTCTCATATGAAGAATCCCAACCCGATGCTGATTATGGCTTGAGTCCGACTGGCTCTCGGAGTGACGGTGTGGGGCGGCTGGTTAGCTTTAACTCCCTGGGGTCACTTTCTGCCACCTCTAGCAACTACAGCTCACTCAGcctgagagagggagaaagggagagagaagaggaaattGGTGAGATCAACGATGGCTTCTTGCCACATTGCAGCCCACGGCTCATCTTGCAGCAAAGTCTAGAGGAGGTTGCTCCACTTCGAGAGTCGACTGACCTCTTGGATATCTCCAACTTCACCCCTGACAAGTTCCGGCATTCATCGCTCTCTGAAATGTCACCACCGGACACACCTAACTCTTCCCCTCAACTGCTGGGGAACTGTGGTAAATCTGGGGAATTTTCTGAAGCAACAGAAGCAAATGTGCAATGGAACTGTGGAGTTGTCCCTCAGCTTAATCAAGACGGAAACCCACACCACCTACAGATACACTCTTTCAACACAGAGGAGGATGAAGTAGGGCTAAGGGATCACAAAGGCTCAACGAAAAAGGGTGGGAAAAATGGACAAGCCACCAAAAAGAGCAAAACTGCTAAAACAGCGAAAGGAGAAAAAGTAAAGCTCCCACGTCAGGGTTCTCGTTCTGTGCGGAAGATCAAAGCCTTGCTAGAGGGAAAAGCAGCCAAAAGTGTCGGAGGGTCAGGAAGTGGTGCTTCTTCCCCTACTCCGTCGCTTGGCTTAATTGGAGCTCAGGGGGAGTGGCCTATTACTGGGGGACTGTCAAACGATGACCAACGAGAATTCCAAGAGCCATCAAACATCCTGTCCAATATAGTGTCTGGTATGGCTGAGGTACAGCGTTTCATGAGGGCCTCTGTGGAGCCTCTTTGGGGGCCTTGTCTTTCACCCGGTCAGCATGCACTCCAGAGCCAGACGCTGAAGATTCTGGGTAATGCTGCTGATCTTAAAAAGCGGGGTGGTGCCTCAAGTGGAGGTCGAGGGAAGAAAGGGGCTGGGCGTGGTGGTAAAGCACTGCCTAAACTTCTCCCACCTGGCTTCTTTCCTAACCTCGGATTGGACTGTCTCCCACTTCCACACCGTCCAgcccacaaaaaaatgtatcgtCACAAAAGCAGCGCTAAGTTTGCCCGCGAGGAACTCTTAGCGGGTAAAAGGGACATAAAAGGAGTAGCACTGACCGCTTTGGTCGAGAAACGGAGCTATAACACTGTATGTGTTAAATCGGTGTCACAGAACCATGGTTTAGACCGAGCCCAGCGCCCTGCTCTGTCTCTCAGCAAATGGTTGCCTTCTGTTCAGGGGTCAAAGATCATGTGTAGTATTCTGTGCTAAAAATCGTTTCCCCTCATTTCTGTGCCAACCCCTCAGAACACTGGGCTTTGACAAGCTAAAAGAAAGCATCTTGACCGAGATGCTCTTGTTTTCTGAGGTTCTGAAATTTCACAagagatttttttcattgttgttatttgtttataaGTTGTGAAAAAAGGAGGTTCATTCATCTGTTCTCCAGTGAATCTCCTCCTGCCAGTATCAAAATGCTGTTGTACACAGACATATGCACTATTTACAAAACAAGAttatatcaaacatgtttaaattaatGTGCCAAACTATGAACAATTAAATGTACAGACATTTTTATCTACAtaaatatttgctgttttataatgtgGCAGTGATTGaggagcgtgtgtgtgcttgGGATGGGGGGGGTTGTTAATCTGAGATTCACTCCTGTTGCATCACATCTGTACAAACAGCTAGCAGCGAGGAGTCATCTCaacaatcagaagaaaaatgctgttggtttattttctatgttttacACTCCTGGCTAGTTCAAGATTAGAGGCATGAAGTAAGAGATGCATGATGAGAATTGGTGGAAGGAAGCTGAAGTGCTATAATGGCAGAGAAAAACATTGGTTGCCTTTCATTCTGATGTGTTTCTGGATGGTCAAAGATCATTGTTCGTGTGTAACAAGGTAAGAAAAGGATCATTCCTTCTTTATAACAAGACTCAATGCATTTTAACTCGCTTATGTCCCCAAGTTTCTAGTTTTGgtaaatatatttctctgtACCTCAACCCTCCAAACTGGTTAAGAACAGGACcaaatttttttctaatttgttgCTAGTgatgtgcatgcatttaaaacatgataTGGATATGTGCTGTGAATGCTGATCCCCTGTATTACTTTCTGACTCGCCTGTTTTTTCTTACCTGATCTCAAAACCATTGTTTTTCTATTGCTGTTGGAATGTTATTTGTTGTGTTATAAAAAGAGGGAAAGATGCCAACCTGGTTACCCCCATGTGCTGTTTACTGCATTGCTTCAGGATCTTTTTTCTGCAACTCCCTGGATCCCCTCTTTTGTGAATACctatttgaaaagaaatattttctCTTTGATTTTCCGCCCTTGCGTTTACAAAGTGTGAATCCCCTTTGAGTTGTTCAACACTGCATTGAATCGACAGCTAGTAGTTTGAGAACTGTTCCTCCATTTTCAAAGTTTAGTGGGTACTTGTGCAAATGCTGTAACATTGCTGTGAATGAATTAAGGTGAAATTACCGGAGTGTTGAAATGTCAAAGGAAACAGGTGCAGATGATGAGTGACATTCCACAGCTTGTGGTGTAATTCAGAAGCGATTTGTAGGGCCTTCCCAGCCAAATCAACCTCACCAAGCAAAAGACCAggaaatattagaatataagtTGTTTGTCCAAACGATTTCTTTCTGTGCTGAGTGAATGGAGATGTAACACGGTTGGTTCAGGTCCGTTGACTCAGGGAACCCAACTGCATTGACATCTCTCATTCCCTCAGCTGCCCATCTCAACATTCAAACCCGAGCTGTTCTCAGCACCGCCCCCTGCTGTACTGTTTTTACATAGCACTACAGTTGCTAAACCTGCAGGACATCTGTGATGCCAATGCAGGGTGCTCTTCTTCATATACTTTGAGAGCCAAGTTTTACACCAGTGAAAACTCTATAGCACACATCCCCTGCACTGACCGAAGcgttcatatttttgaaaagttcTTAAACAGTGTTATTCCCCTATAAGTGCATCATGTAAAGTTAAAACAGGCATATCAAAAACTTAATTGTGCCCTATTTATGAATGTATTATATTGTCAagttggaagtatttttttcatgatttatttGACACTACATTACTTGTAACTACTTCTGCCTTTTTTCATCAtcaaggaaaaaaagaaacactttctACTGCCTGGTCTGTCTTCACCAGGTGGATTCTCAATGAACTCTTgatgtaggaaaaaaaaataatgacctgtatatttttcattgtgccaatttgtaacatattttctaagtgtatatttttcttaGAAAGTGATGTGAGGTCGTTCTTACTGTGGCTTTGTTCTTTTCCCTTTTCAGCAAGTGAAAAGGTTGCTAATTGCcatgatgttttctttctttctttttctttctctctctcttatttgttttttgtttgtttgttttaaagccaaaaattgaaaatactataaaaaataaataaaaaactattgtaaaggagagagaaggagagcaaGCTGTGACTCTTTGTTGAGAGTTTTTGTAATTGGACCAATCTTGTTGTAAGAGTGTTGTGCTctagttaaaatatatattaatttaaagataaaaaaagaaaccatgAAAACAGACAGTGGAACAATAACACTAATTTGTGATCTCATTGCTGTTTTATAGATTTTCATGTAAATTATTctagtattttgtttttgttgtatctgtcacaaaagttgaaatatttgtgatcaAGCCTGTATGGTGACAAATGTAATATTGGTAACTTGCTGAGTTTTGTAATCATGTTTAtggaataaatattaattaaaagagcTTTTGATCACT

Function

NR:

description
PREDICTED: protein KIAA2022 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240381.1 True 6905 mRNA 0.46 4 11389320 11399607

Neighbor

gene id symbol gene type direction distance location
prps1a prps1a,LOC107733231,LOC107672505,LOC103031347,LOC108443767,LOC105023901 coding downstream 425 11382680 ~ 11388895 (-)
tbx5b tbx5b,LOC107733219,LOC107592384,LOC107672879,LOC107748638,LOC107680353,LOC107597309 coding downstream 7537 11373802 ~ 11381783 (-)
cfap73 LOC107680393,LOC107732615,LOC107592352,LOC107592387,LOC107578638 coding downstream 20706 11365078 ~ 11368614 (-)
tpcn1 tpcn1,LOC107732611,LOC107733226,LOC107672457,LOC107680394 coding downstream 27385 11348628 ~ 11361935 (-)
agtr2 LOC107672423,LOC107597233,LOC107733228,LOC107680405,LOC107592269,LOC107732613 coding downstream 44224 11337866 ~ 11345096 (-)
zdhhc15a zdhhc15a,LOC107733221,LOC107672497,LOC107597239 coding upstream 3396 11403003 ~ 11412347 (-)
LOC122345557 LOC107733220,LOC107672464,LOC107680363,LOC107597312 coding upstream 12809 11412416 ~ 11431060 (-)
cnga2b LOC107672575,LOC107733223,LOC107597245,LOC103911065,LOC108443773,LOC105893178 coding upstream 32253 11431860 ~ 11436272 (-)
chmp1b chmp1b,LOC107672547,LOC104940072,LOC101476317 coding upstream 39502 11439109 ~ 11442421 (-)
brwd3 brwd3,LOC107672566,LOC107680390 coding upstream 43015 11442622 ~ 11462761 (-)
G35434 NA non-coding downstream 58954 11304281 ~ 11330366 (-)
G35522 NA non-coding downstream 76490 11311549 ~ 11312830 (-)
G35450 NA non-coding downstream 139314 11249199 ~ 11250006 (-)
G35499 NA non-coding downstream 168429 11219968 ~ 11220891 (-)
G35501 fam76b,LOC107680374,LOC107592275,LOC107687655,LOC107597227 non-coding downstream 175583 11212039 ~ 11213737 (-)
G35592 LOC107741189,LOC107680392,LOC107565414,LOC107733362,LOC107597318 non-coding upstream 271350 11670957 ~ 11674817 (-)
G35594 NA non-coding upstream 292943 11692550 ~ 11694947 (-)
G35597 NA non-coding upstream 296584 11696191 ~ 11697674 (-)
G35599 NA non-coding upstream 298341 11697948 ~ 11699666 (-)
G35601 NA non-coding upstream 301626 11701233 ~ 11703708 (-)
slc25a15b slc25a15b,LOC107744499,LOC107687678,LOC107599942,LOC107726376,LOC107672737 other downstream 420202 10960311 ~ 10969118 (-)
G35384 NA other downstream 463157 10923927 ~ 10926163 (-)
G35371 znf703,LOC107599934,LOC107672788,LOC107744445,LOC107687685,LOC107726392,LOC107592299 other downstream 515256 10868364 ~ 10874064 (-)
G35122 NA other downstream 927611 10461208 ~ 10461709 (-)
si:dkey-96l17.6 si:dkey-96l17.6,LOC107672751,LOC107738297,LOC107592400,LOC107744487,LOC108434467,LOC105902719 other downstream 1053977 10324959 ~ 10335343 (-)
hmgn7 hmgn7,LOC107672554,LOC107756557,LOC107680402,LOC107565427,LOC107748629,LOC107597243,LOC108260037,LOC108442050 other upstream 20348 11419955 ~ 11467122 (-)
G35554 LOC100304549,LOC100219516,LOC106514001,LOC103353280 other upstream 184173 11583780 ~ 11652627 (-)
msna msna,msn,moes,LOC107746233,LOC107597256,LOC107672695,LOC107663223,LOC107741191 other upstream 396049 11795656 ~ 11815944 (-)
sh2d1aa sh2d1aa,LOC107713049,LOC107741293,LOC107663232,LOC107557102 other upstream 765796 12165403 ~ 12169410 (-)
G35825 tenm1,LOC107557119,LOC107713050,LOC107597323,LOC107741271 other upstream 918196 12317803 ~ 12319685 (-)

Expression


Co-expression Network