gnb2 (gnb2,LOC107663406,LOC108428986,LOC107661206,LOC107746402)


Basic Information

Item Value
gene id gnb2
gene name gnb2,LOC107663406,LOC108428986,LOC107661206,LOC107746402
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 14145969 ~ 14156534 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240387.1
TGTCACGGTTTTCTCCAAGTCATTTATTTGCCGTCTTGCGCAAAAGTTTAAATTGAGATCTACCCATCCTCGGAGGAAACACCTGATATTTATGTGTAGCGGCCTACAGCCGAGCGTGTTCCAGCGCGAGGTGCCGCTCATCCCCCCGTTCGGCGGCGGGGAGGTCTGCGCCGCAGTGGTACATTCGCAATAAAATGGGTGTGGTTGAATCGCGCATAAGTGATGCTACGTGTTTCTGGTGCAGACCGAATGATTTCATACGGGACTGAATTGACGGCAGAGCGAGCGcacattatttgaattatttagaaaacaacTGTACTGTTGTTTATGTTGAATTCACCCCGCCTCCCGTTCTGGCACAGCCACATTTGAACTGATGGACGGGCATGCTCCTCCGAAGAGATAACCAAGTCGATTTtggttactttattttaatttttttaaagggccACTGGGCGCCTCGCGCTGTGCCGAACTGGTCATTTCTTGAACGAGGAGCGACGGTCAAAACGGAGAGATCAGAGCGAGAAGacggaggaagaagacactcgGGAGGGAAGAGGCGAGGACCAAGCGACGCAATTTAAAGACAACGACGGCATGTACTTCATTTGAAAGCTTTAATGTATTTGGACTTACTACAGTTGTagGTGTCTGAGGGGGTGAGAGAGGTCAGAGGGTAAAGGTTAAAGGTGATTTCAAGATGAGTGAGCTCGAGCAGCTTCGTCAGGAGGCTGAGCAACTGCGCAATCAGATCAGAGATGCCAGGAAAGCATGTGGAGACTCCACACTCACGCAGaTAACAGCGGGCCTGGACCCGGTGGGGAGGATACAGATGAGGACGAGGCGCACACTTCGTGGGCATTTGGCTAAAATCTACGCCATGCACTGGGGCTCAGACTCCAGGCTTCTTGTTAGTGCCTCACAGGATGGAAAACTCATCATCTGGGACAGCTACACTACAAACAAGATTCATGCCATCCCGTTACGGTCATCGTGGGTGATGACCTGTGCGTACGCACCATCCGGAAACTTTGTGGCCTGTGGTGGACTGGACAACATTTGCTCCATATACAGCTTAAAGACTAGAGAGGGCAATGTTCGAGTGAGCCGGGAGCTGCCTGGACACACAGGTTACCTTTCCTGTTGCCGTTTCATAGATGACAATCAAATTATCACCAGTTCAGGAGACACAACCTGCGCTCTGTGGGACGTGGAGACCGGTCAGCAGACCACGCTGTTCTCAGGTCACAGCGGAGATGTGATGAGTCTGTCATTGGCTCCAGACTCACGGACCTTCATCTCTGGGGCCTGCGACGCCTCAATTAAGCTCTGGGACATCAGAGACAGCATGTGCAGACAGACGTTCACCGGGCACGAGTCAGACATCAACGCTGTCTGTTTCTTCCCCAGCGGCAGTGCATTTGCAACTGGTTCTGATGACGCCACCTGCAGGCTGTTTGACCTGCGTGCGGATCAGGAGCTGTGTTTATACTCTCATGATAATATCATCTGTGGCATCACCTCTGTGGCCTTCTCCCGCTCTGGCCGTCTGCTGCTCGCCGGTTACGATGACTTTAACTGCAACATCTGGGACGCCATGAAGGGAGACCGAGCAGGAGTGCTGGCTGGCCATGACAATCGCGTGAGCTGTCTTGGGGTCACAGATGATGGCATGGCCGTGTGTACAGGTTCCTGGGACAGCTTCCTGAAGATCTGGAACTGAGCACACAGAGCTCACATGCTGTACACGTTATTCACTCATCATACACAATGTACTTTACTGTACATATGATGTACACTTGCCTACACTGACACAcatgcctgaaaaaaaaactgtacattttatatatatatatatatatatatatatatatatatatatatatatatatatatatatatacaaaacacatTAGTTACACGTTTACACCAAATCTTTTCAGTGCCACATCATTCTATACACAGTCACACTATAGGTAGGCTTGGACCACAAGTTTGAAATAGGAATGTTTacacacgttcacacacacacacacactttttcccCCTTACTTAAGGTTTGCTGGAACTATATGGTACCTTCACTAAGAGACACAAGTACATTTGGAGGAATGCGCATTGAGTGAGTTGTCTAATTAGAGCATACAATCCAAAACGTTTATTTGACACGCTTTGACATGCTTCATTTTGAGACTGAGCTCCGAGTGGTGGGTGTTGATCCATCGAAGAGCattcttttcttattttgacTTCCATTGTCTTCTATACTGAAAAATATGTCTGAAGTACCGTTGTTTCCACGAGCATGTAGAGTCGGAAAGATGAAGGAGATGTACTCAACTCATCTGTAGTTGATGCAGATCACATTTTGTGTAGTCCATGTTTTTATAGATGCGTATGCCGGCATATTTCAAGTATataagtaattaaattacattttttgtccattttttttgtttagaatttacattttttaaaggcttttattcatgttttcctGTGTGCCGCACTCTAAggagaataaagaaaaatgaaaataaataaatacaaatctgtgCCACTAAATATGTGATCACAGCTCTCTCAGAACTGTTTAAATACTGTTGTTAATTGACATTACTCAATTCATAAAAGTGGTTTTCAACTAGTTTTATCTGAAGGACCCAGATTTCACGCTGGACAAGCAACAAGATTAATCTGAAAGTGTTAGAAttctaaaagcagaaatgataAAAGAAGTGTAATACCAAACACCTGCATATGATACATTTGGGGCAAAATGTGAAAAGTTTGGAAAAACATCAAAAGGTATTTTTCAAAGTTGGTTTTCTATTACAACCCAATCGGAAACTTGTTGAGAACCACTTGTTTATTTGCGTAAATTGATTTGTTTCCGGTCTAAGTCACAGGAAACAGTGTACGTTTATAGTGTGTTTATGGTACAACCAAAATGATAATTATCTAACATGCCATGAACGTAAATGAGCTAATAAGATGTTCCAAACAAACGAATGTAAACGTTGAAGGAATAAAGAGTTACACCATTTTAACAGAGA
>XM_043240388.1
GTCACGGTTTTCTCCAAGTCATTTATTTGCCGTCTTGCGCAAAAGTTTAAATTGAGATCTACCCATCCTCGGAGGAAACACCTGATATTTATGTGTAGCGGCCTACAGCCGAGCGTGTTCCAGCGCGAGGTGCCGCTCATCCCCCCGTTCGGCGGCGGGGAGGTCTGCGCCGCAGTGGTACATTCGCAATAAAATGGGTGTGGTTGAATCGCGCATAAGTGATGCTACGTGTTTCTGGTGCAGACCGAATGATTTCATACGGGACTGAATTGACGGCAGAGCGAGCGcacattatttgaattatttagaaaacaacTGTACTGTTGTTTATGTTGAATTCACCCCGCCTCCCGTTCTGGCACAGCCACATTTGAACTGATGGACGGGCATGCTCCTCCGAAGAGATAACCAAGTCGATTTtggttactttattttaatttttttaaagggccACTGGGCGCCTCGCGCTGTGCCGAACTGGTCATTTCTTGAACGAGGAGCGACGGTCAAAACGGAGAGATCAGAGCGAGAAGacggaggaagaagacactcgGGAGGGAAGAGGCGAGGACCAAGCGACGCAATTTAAAGACAACGACGGTGTCTGAGGGGGTGAGAGAGGTCAGAGGGTAAAGGTTAAAGGTGATTTCAAGATGAGTGAGCTCGAGCAGCTTCGTCAGGAGGCTGAGCAACTGCGCAATCAGATCAGAGATGCCAGGAAAGCATGTGGAGACTCCACACTCACGCAGaTAACAGCGGGCCTGGACCCGGTGGGGAGGATACAGATGAGGACGAGGCGCACACTTCGTGGGCATTTGGCTAAAATCTACGCCATGCACTGGGGCTCAGACTCCAGGCTTCTTGTTAGTGCCTCACAGGATGGAAAACTCATCATCTGGGACAGCTACACTACAAACAAGATTCATGCCATCCCGTTACGGTCATCGTGGGTGATGACCTGTGCGTACGCACCATCCGGAAACTTTGTGGCCTGTGGTGGACTGGACAACATTTGCTCCATATACAGCTTAAAGACTAGAGAGGGCAATGTTCGAGTGAGCCGGGAGCTGCCTGGACACACAGGTTACCTTTCCTGTTGCCGTTTCATAGATGACAATCAAATTATCACCAGTTCAGGAGACACAACCTGCGCTCTGTGGGACGTGGAGACCGGTCAGCAGACCACGCTGTTCTCAGGTCACAGCGGAGATGTGATGAGTCTGTCATTGGCTCCAGACTCACGGACCTTCATCTCTGGGGCCTGCGACGCCTCAATTAAGCTCTGGGACATCAGAGACAGCATGTGCAGACAGACGTTCACCGGGCACGAGTCAGACATCAACGCTGTCTGTTTCTTCCCCAGCGGCAGTGCATTTGCAACTGGTTCTGATGACGCCACCTGCAGGCTGTTTGACCTGCGTGCGGATCAGGAGCTGTGTTTATACTCTCATGATAATATCATCTGTGGCATCACCTCTGTGGCCTTCTCCCGCTCTGGCCGTCTGCTGCTCGCCGGTTACGATGACTTTAACTGCAACATCTGGGACGCCATGAAGGGAGACCGAGCAGGAGTGCTGGCTGGCCATGACAATCGCGTGAGCTGTCTTGGGGTCACAGATGATGGCATGGCCGTGTGTACAGGTTCCTGGGACAGCTTCCTGAAGATCTGGAACTGAGCACACAGAGCTCACATGCTGTACACGTTATTCACTCATCATACACAATGTACTTTACTGTACATATGATGTACACTTGCCTACACTGACACAcatgcctgaaaaaaaaactgtacattttatatatatatatatatatatatatatatatatatatatatatatatatatatatatatacaaaacacatTAGTTACACGTTTACACCAAATCTTTTCAGTGCCACATCATTCTATACACAGTCACACTATAGGTAGGCTTGGACCACAAGTTTGAAATAGGAATGTTTacacacgttcacacacacacacacactttttcccCCTTACTTAAGGTTTGCTGGAACTATATGGTACCTTCACTAAGAGACACAAGTACATTTGGAGGAATGCGCATTGAGTGAGTTGTCTAATTAGAGCATACAATCCAAAACGTTTATTTGACACGCTTTGACATGCTTCATTTTGAGACTGAGCTCCGAGTGGTGGGTGTTGATCCATCGAAGAGCattcttttcttattttgacTTCCATTGTCTTCTATACTGAAAAATATGTCTGAAGTACCGTTGTTTCCACGAGCATGTAGAGTCGGAAAGATGAAGGAGATGTACTCAACTCATCTGTAGTTGATGCAGATCACATTTTGTGTAGTCCATGTTTTTATAGATGCGTATGCCGGCATATTTCAAGTATataagtaattaaattacattttttgtccattttttttgtttagaatttacattttttaaaggcttttattcatgttttcctGTGTGCCGCACTCTAAggagaataaagaaaaatgaaaataaataaatacaaatctgtgCCACTAAATATGTGATCACAGCTCTCTCAGAACTGTTTAAATACTGTTGTTAATTGACATTACTCAATTCATAAAAGTGGTTTTCAACTAGTTTTATCTGAAGGACCCAGATTTCACGCTGGACAAGCAACAAGATTAATCTGAAAGTGTTAGAAttctaaaagcagaaatgataAAAGAAGTGTAATACCAAACACCTGCATATGATACATTTGGGGCAAAATGTGAAAAGTTTGGAAAAACATCAAAAGGTATTTTTCAAAGTTGGTTTTCTATTACAACCCAATCGGAAACTTGTTGAGAACCACTTGTTTATTTGCGTAAATTGATTTGTTTCCGGTCTAAGTCACAGGAAACAGTGTACGTTTATAGTGTGTTTATGGTACAACCAAAATGATAATTATCTAACATGCCATGAACGTAAATGAGCTAATAAGATGTTCCAAACAAACGAATGTAAACGTTGAAGGAATAAAGAGTTACACCATTTTAACAGAGA
>XM_043240389.1
TGTCACGGTTTTCTCCAAGTCATTTATTTGCCGTCTTGCGCAAAAGTTTAAATTGAGATCTACCCATCCTCGGAGGAAACACCTGATATTTATGTGTAGCGGCCTACAGCCGAGCGTGTTCCAGCGCGAGGTGCCGCTCATCCCCCCGTTCGGCGGCGGGGAGGTCTGCGCCGCAGTGGTACATTCGCAATAAAATGGGTGTGGTTGAATCGCGCATAAGTGATGCTACGTGTTTCTGGTGCAGACCGAATGATTTCATACGGGACTGAATTGACGGCAGAGCGAGCGcacattatttgaattatttagaaaacaacTGTACTGTTGTTTATGTTGAATTCACCCCGCCTCCCGTTCTGGCACAGCCACATTTGAACTGATGGACGGGCATGCTCCTCCGAAGAGATAACCAAGTCGATTTtggttactttattttaatttttttaaagggccACTGGGCGCCTCGCGCTGTGCCGAACTGGTCATTTCTTGAACGAGGAGCGACGGTCAAAACGGAGAGATCAGAGCGAGAAGacggaggaagaagacactcgGGAGGGAAGAGGCGAGGACCAAGCGACGCAATTTAAAGACAACGACGGCATGTACTTCATTTGAAAGCTTTAATGTATTTGGACTTACTACAGTTGTagGTGAAACACAGTCGCCGAGGCCTAACTAGCACTAGGGGGGAAAAAACGACAGTATGCGGTCCTAATCATTttgcagaagaagaaaaaaaattcccagCGAATTACTTCCGCCACCCACTTCAGCATTCCTCTCACTTTACGTGGAGACTAAAGCCAAACAGGAAGATTAACAGGTGTCTGAGGGGGTGAGAGAGGTCAGAGGGTAAAGGTTAAAGGTGATTTCAAGATGAGTGAGCTCGAGCAGCTTCGTCAGGAGGCTGAGCAACTGCGCAATCAGATCAGAGATGCCAGGAAAGCATGTGGAGACTCCACACTCACGCAGaTAACAGCGGGCCTGGACCCGGTGGGGAGGATACAGATGAGGACGAGGCGCACACTTCGTGGGCATTTGGCTAAAATCTACGCCATGCACTGGGGCTCAGACTCCAGGCTTCTTGTTAGTGCCTCACAGGATGGAAAACTCATCATCTGGGACAGCTACACTACAAACAAGATTCATGCCATCCCGTTACGGTCATCGTGGGTGATGACCTGTGCGTACGCACCATCCGGAAACTTTGTGGCCTGTGGTGGACTGGACAACATTTGCTCCATATACAGCTTAAAGACTAGAGAGGGCAATGTTCGAGTGAGCCGGGAGCTGCCTGGACACACAGGTTACCTTTCCTGTTGCCGTTTCATAGATGACAATCAAATTATCACCAGTTCAGGAGACACAACCTGCGCTCTGTGGGACGTGGAGACCGGTCAGCAGACCACGCTGTTCTCAGGTCACAGCGGAGATGTGATGAGTCTGTCATTGGCTCCAGACTCACGGACCTTCATCTCTGGGGCCTGCGACGCCTCAATTAAGCTCTGGGACATCAGAGACAGCATGTGCAGACAGACGTTCACCGGGCACGAGTCAGACATCAACGCTGTCTGTTTCTTCCCCAGCGGCAGTGCATTTGCAACTGGTTCTGATGACGCCACCTGCAGGCTGTTTGACCTGCGTGCGGATCAGGAGCTGTGTTTATACTCTCATGATAATATCATCTGTGGCATCACCTCTGTGGCCTTCTCCCGCTCTGGCCGTCTGCTGCTCGCCGGTTACGATGACTTTAACTGCAACATCTGGGACGCCATGAAGGGAGACCGAGCAGGAGTGCTGGCTGGCCATGACAATCGCGTGAGCTGTCTTGGGGTCACAGATGATGGCATGGCCGTGTGTACAGGTTCCTGGGACAGCTTCCTGAAGATCTGGAACTGAGCACACAGAGCTCACATGCTGTACACGTTATTCACTCATCATACACAATGTACTTTACTGTACATATGATGTACACTTGCCTACACTGACACAcatgcctgaaaaaaaaactgtacattttatatatatatatatatatatatatatatatatatatatatatatatatatatatatatacaaaacacatTAGTTACACGTTTACACCAAATCTTTTCAGTGCCACATCATTCTATACACAGTCACACTATAGGTAGGCTTGGACCACAAGTTTGAAATAGGAATGTTTacacacgttcacacacacacacacactttttcccCCTTACTTAAGGTTTGCTGGAACTATATGGTACCTTCACTAAGAGACACAAGTACATTTGGAGGAATGCGCATTGAGTGAGTTGTCTAATTAGAGCATACAATCCAAAACGTTTATTTGACACGCTTTGACATGCTTCATTTTGAGACTGAGCTCCGAGTGGTGGGTGTTGATCCATCGAAGAGCattcttttcttattttgacTTCCATTGTCTTCTATACTGAAAAATATGTCTGAAGTACCGTTGTTTCCACGAGCATGTAGAGTCGGAAAGATGAAGGAGATGTACTCAACTCATCTGTAGTTGATGCAGATCACATTTTGTGTAGTCCATGTTTTTATAGATGCGTATGCCGGCATATTTCAAGTATataagtaattaaattacattttttgtccattttttttgtttagaatttacattttttaaaggcttttattcatgttttcctGTGTGCCGCACTCTAAggagaataaagaaaaatgaaaataaataaatacaaatctgtgCCACTAAATATGTGATCACAGCTCTCTCAGAACTGTTTAAATACTGTTGTTAATTGACATTACTCAATTCATAAAAGTGGTTTTCAACTAGTTTTATCTGAAGGACCCAGATTTCACGCTGGACAAGCAACAAGATTAATCTGAAAGTGTTAGAAttctaaaagcagaaatgataAAAGAAGTGTAATACCAAACACCTGCATATGATACATTTGGGGCAAAATGTGAAAAGTTTGGAAAAACATCAAAAGGTATTTTTCAAAGTTGGTTTTCTATTACAACCCAATCGGAAACTTGTTGAGAACCACTTGTTTATTTGCGTAAATTGATTTGTTTCCGGTCTAAGTCACAGGAAACAGTGTACGTTTATAGTGTGTTTATGGTACAACCAAAATGATAATTATCTAACATGCCATGAACGTAAATGAGCTAATAAGATGTTCCAAACAAACGAATGTAAACGTTGAAGGAATAAAGAGTTACACCATTTTAACAGAGA

Function

symbol description
gnb2 Predicted to enable signaling receptor complex adaptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to act upstream of or within signal transduction. Predicted to be part of heterotrimeric G-protein complex. Predicted to be active in cytoplasm. Is expressed in central nervous system; cranial ganglion; neurons; retina; and retinal ganglion cell layer. Human ortholog(s) of this gene implicated in Charcot-Marie-Tooth disease dominant intermediate F. Orthologous to several human genes including GNB2 (G protein subunit beta 2).

NR:

description
PREDICTED: guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2

GO: NA

KEGG:

id description
K04536 GNB1; guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240387.1 False 3062 mRNA 0.44 10 14145969 14156534
XM_043240388.1 False 3009 mRNA 0.44 10 14145970 14156534
XM_043240389.1 True 3235 mRNA 0.44 11 14145969 14156534

Neighbor

gene id symbol gene type direction distance location
hsd20b2 hsd20b2,LOC107596111,LOC107661247,LOC107734140,LOC107663385 coding upstream 15920 14124109 ~ 14130049 (+)
si:ch211-284e13.5 LOC107746441,LOC107599206,LOC107661202 coding upstream 53487 14088431 ~ 14092482 (+)
LOC122344888 LOC107746395 coding upstream 86189 14057263 ~ 14059780 (+)
apoa1a LOC107663408,LOC107599208,LOC107746394,LOC107661262,LOC107734125,LOC107596115 coding upstream 104910 14038970 ~ 14041059 (+)
pafah1b2 pafah1b2,LOC107661198,LOC107734127,LOC107663423,LOC107599209,LOC107746392 coding upstream 108800 14033447 ~ 14037169 (+)
gltpd2b LOC107663399,LOC107746407,LOC107734136,LOC107661211,LOC107596106,LOC107580519 coding downstream 65066 14221600 ~ 14225996 (+)
mogat3b mogat3,LOC107746411,LOC107663414,LOC107661213,LOC107752358,LOC107596103 coding downstream 119561 14276095 ~ 14280289 (+)
si:ch211-271e10.2 NA coding downstream 126546 14283080 ~ 14287440 (+)
LOC122345145 NA coding downstream 150303 14306837 ~ 14310076 (+)
LOC122345143 NA coding downstream 155110 14311644 ~ 14314601 (+)
G36420 LOC107663407,LOC107599223,LOC107746393,LOC107661199 non-coding upstream 98475 14046777 ~ 14047494 (+)
G36408 LOC107746439,LOC107663381,LOC107599230 non-coding upstream 138567 14005771 ~ 14007402 (+)
G36406 NA non-coding upstream 142438 14000526 ~ 14003531 (+)
G36405 NA non-coding upstream 145632 13999100 ~ 14000337 (+)
G36332 NA non-coding upstream 171210 13974532 ~ 13974759 (+)
G36503 LOC107599196,LOC107663386 non-coding downstream 165022 14321556 ~ 14326754 (+)
G36507 LOC107663397,LOC107567468,LOC107599188,LOC107746779 non-coding downstream 185389 14341923 ~ 14342507 (+)
G36509 LOC107567468,LOC107752360,LOC107661217 non-coding downstream 186630 14343164 ~ 14343769 (+)
G36510 NA non-coding downstream 189350 14345884 ~ 14346835 (+)
G36573 NA non-coding downstream 309365 14465899 ~ 14466241 (+)
ins ins,LOC107596207 other upstream 160263 13984097 ~ 13985706 (+)
LOC122346073 LOC107654625,LOC107597279,LOC107741224,LOC107696048,LOC107727161 other upstream 1338618 12803789 ~ 12807351 (+)
iscu si:ch211-191d15.2,iscu,LOC107597282,LOC104937683 other upstream 1440724 12703352 ~ 12705245 (+)
si:ch211-225b11.4 si:ch211-225b11.4,LOC107743340,LOC107597327,LOC107654601,LOC107580265,LOC107735986 other upstream 1617179 12514013 ~ 12528790 (+)
G35720 LOC107654642,LOC107597266,LOC107743332,LOC107741203,LOC107557123,LOC107663229 other upstream 1890297 12249138 ~ 12255672 (+)
G36495 NA other downstream 133886 14290420 ~ 14292500 (+)
LOC122345142 NA other downstream 143509 14300043 ~ 14305304 (+)
LOC122345214 NA other downstream 176489 14333023 ~ 14337765 (+)
mrpl1 LOC107663378,LOC107746869,LOC107752362,LOC107599195 other downstream 191028 14347562 ~ 14349991 (+)
fgf5 fgf5,LOC107599194,LOC107746784,LOC107663393,LOC107661278,LOC107602014,LOC107744874 other downstream 489411 14645945 ~ 14652911 (+)

Expression


Co-expression Network