LOC122345891


Basic Information

Item Value
gene id LOC122345891
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 15614467 ~ 15616462 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240406.1
AGGTCATCTACTTAACActtctaaaaaatgtttgtaagaATCTTTAGTCTGCCTCAACCCAGATTAAGATATTAATTGACGCACAAACAAAAGCTGTTACAAACGGATCAACTTCATTTACATGAAGGGTCATAAACTAACTGAATAAAAGATTTCATTTTAGGATGTTTGGGGTTCTTTCTAAATCTTACATGTACTTTGTAATAAACATCTTCATCCAGATCCTCAAAACCTTCATCACTTTTTCTTGCCTTTTTGGCCGCTAAATTCTGTTTGACACAGAAGAGTAGTGGTTTTCTATTCTATTGTCTTCCCtataggaatagttcaccttCAATTCTACCAACTtgcatagttttatttttttcagtacaatacaagtcaatggggaccaacaactgaaggtgaactatccctttatttgtgtaaatgcaGGCTATTTAGAAATTAGCTGATGGGCTGTTTAGTgaccagatttttttatttaattttttttgctgttttattctgCTGTTTATAGCGTTACATGCTTATTAGAATCCCACTGATGAAACAAAAACTGTCAGAAGCATAATTTTCACATTCACCAAAAAAAACTCCCCGAAGATGTTCAGTGTTCATCTCCCTTTATTCAAGAAATTACAATGTTTTGGTCAAAGACCTTCATCAGGCAAACACACTGATGAATTTGTGTTCAGTTTGTAAGGAATTCTTTTGACTTTTAACTTCTGCAGCTTCAGTGATCAGATCAGACCATGAAGCTGTTTGAACTGTGTTTCCCTGCTGTCTGGATATTGTCCTGCTGTGTATTCTCTGGCAGAGGTCATGGTGTGTGTACTGTAGGGAATCTCATTAAAAGAATCAATTTAACCACAGAACTGAGTTCTGAAATCCTGCTGCCGTGTCTTTATGAACCAGCTCTCAAAGGATCACACCTGACCGAGGAATCATTTGCTGACTGGATTCAGATTAAAACCAACACTGACTACATTGTAGAGATCAGTGTAAATGGTCAAGAAAGCTTCTGGAATAACAGACAGCATAGAATTAAGGTATTCAGAGAAGTCGCTGGCTCTGGAAACTTCTCTCTCCTGATTAGAGATGTGCAGCTGTCTGATCTGGGTCTCTACCGCTGTGAGATCTTCAGAGGCATCAACTGTTCTCTGGGCTATGTAGAGATAGAAATCAGTCTGGCCACTGTTGAGATTTCACTGCTCAGTAACTGGCGTCTCATAGCTGCAGGTGGAGGAGGATTTCTGCTTCTCTGTCTGATCACTGTGTGCTTTTACTGTATGCTGGCAAAACGTGAGTCTGGTAAACCTGCTATGAGACCTGGTAAGTTAATTgcacaattattatataataatgtaacagaATTTATACAACACGCATACTACCACAGTATGATTTTGAATTTGATAAGGCTGATTTAATTCGTAAGTCTCTTAATTCGCTCTGTAATAGTTTTCAATGCAAAACCGCTCTCAAATGCAGATGTGTTTAAATCTGAAGAACATATTGTACAAAGCTTCATATCATTAACACTTTCTTTTAACATCATCTTTCAGGTCCCGCCTTTGATGCTTTGACCTACACAACAGTGGTCTATTAGGGATTGCCTAGAAATGCGTGCATTTAcatcataattaaaatacattattacagTAGTCTGTTATTTATATACTGCGTGTAAAATCTGTTGATTGTATAACATATAAACTTTGAGATGTATCTTTGTAACATGGCTGTGTTGGCAGACAGGCTACGTTTCACGACACGCTTTTAATTCACACCCCTATTTACctgaataactgaaataaa
>XM_043240407.1
AGGTCATCTACTTAACActtctaaaaaatgtttgtaagaATCTTTAGTCTGCCTCAACCCAGATTAAGATATTAATTGACGCACAAACAAAAGCTGTTACAAACGGATCAACTTCATTTACATGAAGGGTCATAAACTAACTGAATAAAAGATTTCATTTTAGGATGTTTGGGGTTCTTTCTAAATCTTACATGTACTTTGTAATAAACATCTTCATCCAGATCCTCAAAACCTTCATCACTTTTTCTTGCCTTTTTGGCCGCTAAATTCTGTTTGACACAGAAGAGTAGTGGTTTTCTATTCTATTGTCTTCCCtataggaatagttcaccttCAATTCTACCAACTtgcatagttttatttttttcagtacaatacaagtcaatggggaccaacaactgaaggtgaactatccctttatttgtgtaaatgcaGGCTATTTAGAAATTAGCTGATGGGCTGTTTAGTgaccagatttttttatttaattttttttgctgttttattctgCTGTTTATAGCGTTACATGCTTATTAGAATCCCACTGATGAAACAAAAACTGTCAGAAGCATAATTTTCACATTCACCAAAAAAAACTCCCCGAAGATGTTCAGTGTTCATCTCCCTTTATTCAAGAAATTACAATGTTTTGGTCAAAGACCTTCATCAGGCAAACACACTGATGAATTTGTGTTCAGTTTGTAAGGAATTCTTTTGACTTTTAACTTCTGCAGCTTCAGTGATCAGATCAGACCATGAAGCTGTTTGAACTGTGTTTCCCTGCTGTCTGGATATTGTCCTGCTGTGTATTCTCTGGCAGAGGTCATGGTGTGTGTACTGTAGGGAATCTCATTAAAAGAATCAATTTAACCACAGAACTGAGTTCTGAAATCCTGCTGCCGTGTCTTTATGAACCAGCTCTCAAAGGATCACACCTGACCGAGGAATCATTTGCTGACTGGATTCAGATTAAAACCAACACTGACTACATTGTAGAGATCAGTGTAAATGGTCAAGAAAGCTTCTGGAATAACAGACAGCATAGAATTAAGGTATTCAGAGAAGTCGCTGGCTCTGGAAACTTCTCTCTCCTGATTAGAGATGTGCAGCTGTCTGATCTGGGTCTCTACCGCTGTGAGATCTTCAGAGGCATCAACTGTTCTCTGGGCTATGTAGAGATAGAAATCAGTCTGGCCACTGTTGAGATTTCACTGCTCAGTAACTGGCGTCTCATAGCTGCAGGTGGAGGAGGATTTCTGCTTCTCTGTCTGATCACTGTGTGCTTTTACTGTATGCTGGCAAAACGTGAGTCTGGTAAACCTGCTATGAGACCTGGTCCCGCCTTTGATGCTTTGACCTACACAACAGTGGTCTATTAGGGATTGCCTAGAAATGCGTGCATTTAcatcataattaaaatacattattacagTAGTCTGTTATTTATATACTGCGTGTAAAATCTGTTGATTGTATAACATATAAACTTTGAGATGTATCTTTGTAACATGGCTGTGTTGGCAGACAGGCTACGTTTCACGACACGCTTTTAATTCACACCCCTATTTACctgaataactgaaataaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240406.1 True 1821 mRNA 0.37 3 15614467 15616462
XM_043240407.1 False 1588 mRNA 0.38 4 15614467 15616462

Neighbor

gene id symbol gene type direction distance location
LOC122345011 NA coding downstream 3373 15605437 ~ 15611094 (-)
si:dkey-65b12.6 LOC107746818,LOC107680961,LOC107552589 coding downstream 10135 15589884 ~ 15604332 (-)
atxn2 LOC107746814,LOC107680995,LOC107552590,LOC107708645,LOC107676658 coding downstream 59781 15534694 ~ 15554686 (-)
riok2 riok2,LOC107746813,LOC107681048,LOC107676637 coding downstream 79975 15530074 ~ 15534492 (-)
epg5 epg5,LOC107746812,LOC107681055,LOC107676662,LOC107708644 coding downstream 85121 15505966 ~ 15529346 (-)
ncor1 ncor1,LOC107676644,LOC107746860,LOC107553567,LOC107680951,LOC107552540 coding upstream 139 15616601 ~ 15684436 (-)
flot2a flot2,flot2a,LOC107746832,LOC107676660 coding upstream 205407 15821869 ~ 15838717 (-)
LOC122345699 LOC107718358,LOC107553579,LOC107676641,LOC107680767,LOC107746876 coding upstream 226531 15842993 ~ 15843844 (-)
LOC122345991 LOC107718358,LOC107553579,LOC107676641,LOC107680767,LOC107746876 coding upstream 233359 15849821 ~ 15850648 (-)
grsf1 grsf1,LOC107746834,LOC107680726,LOC107579879 coding upstream 259131 15875593 ~ 15878477 (-)
G36969 NA non-coding downstream 49205 15564098 ~ 15565262 (-)
G36968 NA non-coding downstream 52104 15562148 ~ 15562363 (-)
G36967 NA non-coding downstream 52389 15561722 ~ 15562078 (-)
G36811 NA non-coding downstream 445109 15169047 ~ 15169358 (-)
G36714 NA non-coding downstream 708846 14905385 ~ 14905621 (-)
G36986 NA non-coding upstream 97213 15713675 ~ 15713975 (-)
G37067 NA non-coding upstream 112741 15729203 ~ 15729893 (-)
G37076 NA non-coding upstream 131060 15747522 ~ 15749497 (-)
G37079 NA non-coding upstream 161251 15777713 ~ 15783005 (-)
G37064 NA non-coding upstream 196453 15812915 ~ 15813933 (-)
alkbh2 alkbh2,LOC107746816,LOC107552593,LOC107676640 other downstream 35500 15568019 ~ 15578967 (-)
npr3 LOC107681138,LOC107746807,LOC107552598,LOC107602007,LOC107708637,LOC107661273 other downstream 247054 15350016 ~ 15367413 (-)
zfr zfr,LOC107746805,LOC107681158,LOC107552600,LOC107602019 other downstream 306027 15293856 ~ 15308440 (-)
pdzd2 pdzd2,LOC107746802,LOC107681406,LOC107661237 other downstream 349522 15205951 ~ 15264945 (-)
LOC122345141 LOC107752369,LOC107661250,LOC107567461 other downstream 1312086 14292063 ~ 14302381 (-)
cenpv cenpv,LOC107718355,LOC107676655,LOC107746825,LOC107680877,LOC107553589,LOC107552586 other upstream 87071 15703533 ~ 15709430 (-)
emc6 emc6,LOC107680863,LOC107746824,LOC107552584,LOC107553592,LOC107552561 other upstream 108565 15725027 ~ 15728108 (-)
fam222ba LOC107552581,LOC107746861,LOC107680853,LOC107676666,LOC107553569,LOC107680837,LOC107552580,LOC107746822,LOC107746829,LOC107680824,LOC107552579,LOC107676664,LOC107553594,LOC107718349 other upstream 126278 15742740 ~ 15808380 (-)
cxcl11.4 LOC107718357,LOC107746875,LOC107553578,LOC107676639,LOC107680777,LOC107552559,LOC107553571 other upstream 223864 15840326 ~ 15841678 (-)
LOC122345695 LOC107718358,LOC107553579,LOC107676641,LOC107680767,LOC107746876 other upstream 229574 15846036 ~ 15847036 (-)

Expression


Co-expression Network