cenatac (LOC107712938,LOC107600772,LOC107691808,LOC107664297,LOC107556429)


Basic Information

Item Value
gene id cenatac
gene name LOC107712938,LOC107600772,LOC107691808,LOC107664297,LOC107556429
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 23045402 ~ 23049958 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240444.1
AGTCGACGCCACGTGACGTCGCTATGTTTGGATAACGTCACTTGCAGTCGCTAAAAAAACTAACACAAAACAGCCAAATGGGAGCGTTTTATTGTTCCGTCTGCAGAAAAACGGATTTTTCTGGAAAAGGGCACATTTATGGGAAAAGCCATCAAAGCAAACTTAAAGTAATTCTTGTCAAATTTACGGAGAAGGTCAAAGAAGCGAAGCGGACCATTAAAAAGCCGCAGGTAGAGAAATACAGTCCTGATCATGAGGAGAAGTTCTGGTGTTACTGCTGCGCTCTGGAGCTGCCCAAACACGTGACCGACCGTAACATTAGTGTACTGTATGGAGGACTGCTGGAGCACATGAGCACCCCAGAGCACCGGACCAACACACACAAGTTCTGGTGGGACAATAAAGCAGATCCCAAACTGCGAGACAAGTTCATCGTAACTGAAGAGGAAACTGAGAGattcaAGTCTGAGGTTTCCAAGGCTCTGGAACAGTTTGAGGAAAAAGAGGATGTGTTTATTAAACAGCAAGCTGCAGTGATCCGTTCTCAGGAGCAGCACAGGCTGGAGGTCCTTCAGTCACTATCAGAGCCTGATCCAGAACTGGTACGTCCTGCTGAAGTGGACCAACACGGCAGTAACCGTACAGCCAGAAGCTCTCACAGTCACTCTTACGAAATGGAGGCACAACCCGGGCCGAGCCACGAGGATTTCACCTCACGCAGCCAGTGGAATAAACCAGGATTCGCCTTAACTTTCATTGGCTACCAGGACTCGTCCGGCAGCGGAAATGTTCACACTGGAGCTGTACCACCGTGGCTGCTGGAGGAGCCTGATGAAGCCTCAGCAAGTGGACAGCAGGAAGTGGGCCCCTCACTTCAGGAGTTCCTCAAACACAAGGAGCAGGAGAAGCTCAAGAAGCTTCCGCCAAACCGTGTGGGTGCAAACTTTGACCACAGCTCGCAGACTGACGCCAACTGGCTGCCGTCTTTTGGACGCGTGTGGAATAGCGGCAGGCGCTGGCAGTCGAGGCGTCAGTTTAGAGAGGAAGAGGCAAAAACCAGGGGGAAGAGGAAGTGGGAAGGTGATGGGAAAGCAACAAAGCAGCAAAAAGACTTCAGAAATGGAGAGTTATGAAATGAACGCCCCAAATATACTGGCCGCGTCGGGAGGATGGAATATTGTTTTCTCATATTGGGAATTGACCTCAGTTTTGAACGTGTTTGTTTCAGCTCGAGCATTTCTGAAACCACGTTGAAAGAATTTTTACGCGAGATGAATGTCATTCGTGTTTCCAGtttattgaatacatttttgctacagatgtgtaattttcttttttggtcataaatccaaaacaaaatattcttcCCACTCTCCTCAAAAGGTAAATGTGATAAAATGAAGACACAATGTGCAATATCTTCTTTCCATTTTGAACAATACATCAGTCAAATTTAATAGAATCTCATCTATTAGAGCTATTTCATGTTCTCAACGGAAAGCCAAGACCATATTAATgttcaataatataataaaatacctCAAACGTCtagacagaataataaaaatacagattacattaatattaaag
>XM_043240445.1
AGTCGACGCCACGTGACGTCGCTATGTTTGGATAACGTCACTTGCAGTCGCTAAAAAAACTAACACAAAACAGCCAAATGGGAGCGTTTTATTGTTCCGTCTGCAGAAAAACGGATTTTTCTGGAAAAGGGCACATTTATGGGAAAAGCCATCAAAGCAAACTTAAAGTAATTCTTGTCAAATTTACGGAGAAGGTCAAAGAAGCGAAGCGGACCATTAAAAAGCCGCAGGTAGAGAAATACAGTCCTGATCATGAGGAGAAGTTCTGGTGTTACTGCTGCGCTCTGGAGCTGCCCAAACACGTGACCGACCGTAACATTAGTGTACTGTATGGAGGACTGCTGGAGCACATGAGCACCCCAGAGCACCGGACCAACACACACAAGTTCTGGTGGGACAATAAAGCAGATCCCAAACTGCGAGACAAGTTCATCGTAACTGAAGAGGAAACTGAGAGattcaAGTCTGAGGTTTCCAAGGCTCTGGAACAGTTTGAGGAAAAAGAGGATGTGTTTATTAAACAGCAAGCTGCAGTGATCCGTTCTCAGGAGCAGCACAGGCTGGAGGTCCTTCAGTCACTATCAGAGCCTGATCCAGAACTGGTACGTCCTGCTGAAGTGGACCAACACGGCAGTAACCGTACAGCCAGCTCTCACAGTCACTCTTACGAAATGGAGGCACAACCCGGGCCGAGCCACGAGGATTTCACCTCACGCAGCCAGTGGAATAAACCAGGATTCGCCTTAACTTTCATTGGCTACCAGGACTCGTCCGGCAGCGGAAATGTTCACACTGGAGCTGTACCACCGTGGCTGCTGGAGGAGCCTGATGAAGCCTCAGCAAGTGGACAGCAGGAAGTGGGCCCCTCACTTCAGGAGTTCCTCAAACACAAGGAGCAGGAGAAGCTCAAGAAGCTTCCGCCAAACCGTGTGGGTGCAAACTTTGACCACAGCTCGCAGACTGACGCCAACTGGCTGCCGTCTTTTGGACGCGTGTGGAATAGCGGCAGGCGCTGGCAGTCGAGGCGTCAGTTTAGAGAGGAAGAGGCAAAAACCAGGGGGAAGAGGAAGTGGGAAGGTGATGGGAAAGCAACAAAGCAGCAAAAAGACTTCAGAAATGGAGAGTTATGAAATGAACGCCCCAAATATACTGGCCGCGTCGGGAGGATGGAATATTGTTTTCTCATATTGGGAATTGACCTCAGTTTTGAACGTGTTTGTTTCAGCTCGAGCATTTCTGAAACCACGTTGAAAGAATTTTTACGCGAGATGAATGTCATTCGTGTTTCCAGtttattgaatacatttttgctacagatgtgtaattttcttttttggtcataaatccaaaacaaaatattcttcCCACTCTCCTCAAAAGGTAAATGTGATAAAATGAAGACACAATGTGCAATATCTTCTTTCCATTTTGAACAATACATCAGTCAAATTTAATAGAATCTCATCTATTAGAGCTATTTCATGTTCTCAACGGAAAGCCAAGACCATATTAATgttcaataatataataaaatacctCAAACGTCtagacagaataataaaaatacagattacattaatattaaag
>XM_043240446.1
AGTCGACGCCACGTGACGTCGCTATGTTTGGATAACGTCACTTGCAGTCGCTAAAAAAACTAACACAAAACAGCCAAATGGGAGCGTTTTATTGTTCCGTCTGCAGAAAAACGGATTTTTCTGGAAAAGGGCACATTTATGGGAAAAGCCATCAAAGCAAACTTAAAGTAATTCTTGTCAAATTTACGGAGAAGGTCAAAGAAGCGAAGCGGACCATTAAAAAGCCGCAGGTAGAGAAATACAGTCCTGATCATGAGGAGAAGTTCTGGTGTTACTGCTGCGCTCTGGAGCTGCCCAAACACGTGACCGACCGTAACATTAGTGTACTGTATGGAGGACTGCTGGAGCACATGAGCACCCCAGAGCACCGGACCAACACACACAAGTTCTGGTGGGACAATAAAGCAGATCCCAAACTGCGAGACAAGTTCATCGTAACTGAAGAGGAAACTGAGAGattcaAGTCTGAGGTTTCCAAGGCTCTGGAACAGTTTGAGGAAAAAGAGGATGTGTTTATTAAACAGCAAGCTGCAGTGATCCGTTCTCAGGAGCAGCACAGGCTGGAGGTCCTTCAGTCACTATCAGAGCCTGATCCAGAACTGGTACGTCCTGCTGAAGTGGACCAACACGGCAGTAACCGTACAGCCAGTCACTCTTACGAAATGGAGGCACAACCCGGGCCGAGCCACGAGGATTTCACCTCACGCAGCCAGTGGAATAAACCAGGATTCGCCTTAACTTTCATTGGCTACCAGGACTCGTCCGGCAGCGGAAATGTTCACACTGGAGCTGTACCACCGTGGCTGCTGGAGGAGCCTGATGAAGCCTCAGCAAGTGGACAGCAGGAAGTGGGCCCCTCACTTCAGGAGTTCCTCAAACACAAGGAGCAGGAGAAGCTCAAGAAGCTTCCGCCAAACCGTGTGGGTGCAAACTTTGACCACAGCTCGCAGACTGACGCCAACTGGCTGCCGTCTTTTGGACGCGTGTGGAATAGCGGCAGGCGCTGGCAGTCGAGGCGTCAGTTTAGAGAGGAAGAGGCAAAAACCAGGGGGAAGAGGAAGTGGGAAGGTGATGGGAAAGCAACAAAGCAGCAAAAAGACTTCAGAAATGGAGAGTTATGAAATGAACGCCCCAAATATACTGGCCGCGTCGGGAGGATGGAATATTGTTTTCTCATATTGGGAATTGACCTCAGTTTTGAACGTGTTTGTTTCAGCTCGAGCATTTCTGAAACCACGTTGAAAGAATTTTTACGCGAGATGAATGTCATTCGTGTTTCCAGtttattgaatacatttttgctacagatgtgtaattttcttttttggtcataaatccaaaacaaaatattcttcCCACTCTCCTCAAAAGGTAAATGTGATAAAATGAAGACACAATGTGCAATATCTTCTTTCCATTTTGAACAATACATCAGTCAAATTTAATAGAATCTCATCTATTAGAGCTATTTCATGTTCTCAACGGAAAGCCAAGACCATATTAATgttcaataatataataaaatacctCAAACGTCtagacagaataataaaaatacagattacattaatattaaag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240444.1 True 1590 mRNA 0.45 11 23045402 23049958
XM_043240445.1 False 1587 mRNA 0.45 11 23045402 23049958
XM_043240446.1 False 1578 mRNA 0.45 11 23045402 23049958

Neighbor

gene id symbol gene type direction distance location
derl2 derl2,LOC107664304,LOC107744323 coding downstream 134531 22906901 ~ 22910871 (-)
rabep1 rabep1,LOC107691762,LOC107664300 coding downstream 144509 22883355 ~ 22900893 (-)
vps37d si:ch211-284f22.3,LOC107600766,LOC107691764,LOC107744342,LOC107561583,LOC107709757,LOC107689385 coding downstream 170531 22844746 ~ 22874871 (-)
prkrip1 prkrip1,LOC107691809,LOC107600793,LOC107689383 coding downstream 210079 22832643 ~ 22835323 (-)
upk3b LOC107691810,LOC107709747,LOC107600792 coding downstream 213668 22826309 ~ 22831734 (-)
foxr1 zgc:171734,LOC107712932,LOC107691807,LOC107600773 coding upstream 978 23050936 ~ 23054269 (-)
zgc:194948 NA coding upstream 4988 23054946 ~ 23056425 (-)
pou2f3 pou2f3,LOC107600771,LOC107712933,LOC107691752,LOC107556425,LOC107744320,LOC107664296 coding upstream 7247 23057205 ~ 23066572 (-)
oafb LOC107691805,LOC107744339,LOC107556424,LOC107664291 coding upstream 20152 23070110 ~ 23076394 (-)
pde9ab LOC107664292,LOC107556423,LOC107600796,LOC107712935,LOC108427349,LOC108259736,LOC571737 coding upstream 28598 23078556 ~ 23084925 (-)
G38747 NA non-coding downstream 7932 23036457 ~ 23037470 (-)
G38658 nup88,LOC107691763,LOC107709758,LOC107600765,LOC107744326,LOC107664301 non-coding downstream 168965 22873971 ~ 22876437 (-)
G38634 NA non-coding downstream 252349 22791690 ~ 22793053 (-)
LOC122344815 NA non-coding downstream 1004135 22038360 ~ 22041267 (-)
LOC122346224 NA non-coding downstream 1005368 22039901 ~ 22040034 (-)
G38767 NA non-coding upstream 295631 23345589 ~ 23345797 (-)
G38769 NA non-coding upstream 307616 23357574 ~ 23358147 (-)
G38892 NA non-coding upstream 616883 23666841 ~ 23669869 (-)
G38982 NA non-coding upstream 852661 23902619 ~ 23902898 (-)
G39034 NA non-coding upstream 927218 23977176 ~ 23978527 (-)
LOC122344823 LOC107717639,LOC107712133,LOC107685828,LOC107710712,LOC107681889,LOC107575606,LOC107587718 other downstream 1161380 21877081 ~ 21884022 (-)
akap10 akap10,LOC107595480,LOC107587677 other downstream 1219297 21809013 ~ 21826105 (-)
G38355 abr,LOC107665039,LOC107595513,LOC107712163 other downstream 1425819 21612688 ~ 21619583 (-)
G38359 NA other downstream 1676354 21364238 ~ 21369048 (-)
LOC122345723 LOC107665045,LOC107595503,LOC107688632,LOC107731048,LOC107740809,LOC107740824 other downstream 2109305 20906043 ~ 20936097 (-)
nrgna nrgna other upstream 77254 23127212 ~ 23132008 (-)
LOC122345364 NA other upstream 552278 23602236 ~ 23605748 (-)
G38917 LOC107691721,LOC107751254,LOC107564048,LOC107721650,LOC107603186,LOC107663788 other upstream 701922 23751880 ~ 23756588 (-)
G38973 NA other upstream 837345 23887303 ~ 23887680 (-)
aatf LOC107695156,LOC107730321,LOC107600606,LOC107603183 other upstream 929706 23979664 ~ 23997739 (-)

Expression


Co-expression Network