LOC122345935


Basic Information

Item Value
gene id LOC122345935
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 1524902 ~ 1526918 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240475.1
GTGACTGCATCCCTGAAGCTTTTTTGTGTGCCACATCCGACAGTAGTGATGACATCCTCCAGGATACAGTGTCTGCCATGTCCAGCTGTAGCAATTACTTCTGCCAAGCTTCAGTCTCTCTCATGTCCGACAGTACCGATGACTTCCTTTCAACTTGCTGTGACATGTCTGACTGTAGTGTTGATGCTCCTGAAGCTAGAGTCTCTCAGACAGAGTACACTGTGCCACCTCAGTCAAGCCAGCCGCAGGATGAGTCAAGATTTATTGACATAAATTCATGCTGTTATGAAATCGGCAGTCAGCTGGGTGAAGGAAGCTTTGGTACCGTTTATGCAGCGACTCGTTTGGATGATGGCCTACAGGTGGTGATAAAGTTTGTATCCAACAGGAACAACAAGTTCATCGTCATTGACGGCTGTTCCAAGCCTCTTCCTCTGGAGGTCGCTCTGTTGATTCTGGCAAACGAAGGCCCTACGGTGAAGGAAATCATCCAGCTTCTGGACTGGCGGGTGGAGGCTGACCACTACATGTTGGTGATGGAGCGGCCCATGCCCTGTGAGGAACTGAACTGGTTTCTCCTCCGGCAAGTGGTGACTCTTAAAGAAGGCGTGGCACGGGTCATCATGCAGCAGGTAACATTCGCAGCCCAGACCTGCTGCAGACGGGGAGTGTTGCACAGGGATATTAAGATGGAAAACATCCTCATCAACCCGGACACACTCAGAGTCAAATTGATTGACTTTGGGTGCGGTGATTTTCTCACCGATGCGGCGTACACATCCTTTGCTGGCACAAGAGAGTACTGCCCTCCTGAATACCTGGTGAGCGGCCAGTACCACGGAGAACCAGCCACAGTGTGGTCTTTGGGGATCGTCTTGTTTGCCTTGCTGTGTGGGGATTTCCCAAAGACACGTGACCTGGAAAAGATCCGCAGCAACACCTGGACCAAAGATGGCTTATCAAAAGAATGCTGCGATATTATTTGTCGCTGTCTGCAGCTTGACCCGAAGCAGCGGATTGAGCTGAAGAACCTCAGTCTCCACGACTGGTTCAGTGTGACAGGAAACCAGTGCTGCTTCCAGCCCCCAGAAATTCACAGAAGTGGAGAAATGTACCCTGATGGAAATATTCAGGGCTGTTCCGGTCCTCAGCCCAGAGctgtttaatagaaattataattagataagatagataaatagatag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240475.1 True 1203 mRNA 0.50 6 1524902 1526918

Neighbor

gene id symbol gene type direction distance location
LOC122346041 NA coding downstream 5036 1512140 ~ 1519866 (-)
vsig10 vsig10,LOC107704538,LOC107599650,LOC107668731,LOC107736326,LOC107716538 coding downstream 12713 1506685 ~ 1512189 (-)
wsb2 wsb2,LOC107704505,LOC107716543,LOC107668737,LOC107599617 coding downstream 18670 1501467 ~ 1506232 (-)
ksr2 ksr2,LOC107599618 coding downstream 30215 1424404 ~ 1494687 (-)
nos1 nos1,LOC107599638,LOC107726721,LOC107668720 coding downstream 121778 1355359 ~ 1403124 (-)
LOC122344835 aifm3,LOC107668732,LOC107716541,LOC107599649,LOC107755821,LOC107653263,LOC107599166 coding upstream 16500 1543418 ~ 1564546 (-)
cldn26 LOC107716548,LOC107653273,LOC107755822,LOC107599648,LOC107668741,LOC107576154 coding upstream 42486 1569404 ~ 1570066 (-)
lztr1 lztr1,LOC107716547,LOC107704547,LOC107755835,LOC107668721 coding upstream 45230 1572148 ~ 1579628 (-)
p2rx2 p2rx2,LOC107704555,LOC108431687 coding upstream 70929 1597847 ~ 1603060 (-)
mapk1 mapk1,LOC107741490,LOC107704570,LOC107599610,LOC107386038 coding upstream 169514 1696432 ~ 1717901 (-)
G32440 NA non-coding downstream 11590 1513045 ~ 1513312 (-)
G32409 NA non-coding downstream 233139 1289278 ~ 1291763 (-)
G32292 NA non-coding downstream 472723 1051867 ~ 1052179 (-)
G32275 NA non-coding downstream 645760 877910 ~ 879142 (-)
LOC122344906 LOC107676118 non-coding downstream 702073 820190 ~ 822829 (-)
G32463 LOC107599159 non-coding upstream 10480 1537398 ~ 1539368 (-)
G32462 NA non-coding upstream 14308 1541226 ~ 1567149 (-)
G32486 pes,LOC107704970,LOC107741508 non-coding upstream 79507 1606425 ~ 1607747 (-)
G32572 NA non-coding upstream 139780 1666698 ~ 1666906 (-)
G32579 NA non-coding upstream 232726 1759644 ~ 1759857 (-)
lrrc74b lrrc74b,LOC107755819,LOC107667596,LOC107599620 other downstream 170488 1342606 ~ 1354414 (-)
castor1 gatsl3,LOC107755828,LOC107726730,LOC107704487 other downstream 188715 1312604 ~ 1336187 (-)
wdr31 wdr31,si:ch73-266o15.4,LOC107653158,LOC107667323,LOC107751417 other downstream 893776 622514 ~ 631126 (-)
ddr2l ddr2l,LOC107704361,LOC107725118,LOC107550294,LOC107723312,LOC107667359,LOC108444179 other downstream 941807 556654 ~ 583095 (-)
kcnv2b atp5ib,atp5i,atp5ia,kcnv2b,LOC107703581,LOC107725101,LOC107704252,LOC107594594,LOC107723293 other downstream 1137024 382052 ~ 387878 (-)
ypel1 ypel1,YPEL1,ypelc,ypel2b,LOC103374080,LOC106586007 other upstream 146106 1673024 ~ 1694286 (-)
G32676 NA other upstream 439719 1966637 ~ 1967748 (-)
LOC122344636 pex11a,LOC107556261,LOC107714788,LOC107690406,LOC107691149,LOC107715221,LOC107551461 other upstream 493178 2020096 ~ 2022922 (-)
G32857 NA other upstream 969586 2496504 ~ 2554146 (-)
snrnp27 snrnp27 other upstream 1053630 2580548 ~ 2585452 (-)

Expression


Co-expression Network