LOC122345937 (LOC107704040,LOC107557591,LOC107748061,LOC107725130,LOC103139561,LOC102299939,LOC100537556)


Basic Information

Item Value
gene id LOC122345937
gene name LOC107704040,LOC107557591,LOC107748061,LOC107725130,LOC103139561,LOC102299939,LOC100537556
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 32315687 ~ 32342744 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240476.1
CCCAACCCCTCGGGCCACCCGCTCTTGAGTTGGAGACTCCTGGCTCCCGTTCGGCTCACAGTCCGGGCAACAGAGGGACACGGGAATGGACACAGAAGGGAGTCAGAGCAGCCTGTCGTCCTCCACGCAGGACTCCCCACACGACCCCTGCAAAATGTTCATCGGCGGGTTGAGCTGGCAGACGACACAAGaGGGGCTGAAGGAATACTTTTGTAAATTCGGCGAGGTGAAGGAGTGTATGGTGATGCGGGATCCGGTTACGAAGCGGTCGAGGGGGTTCGGATTTGTCACCTACGTAGACCAGACCGGTGTGGATAAAGTTTTGGCCCAAAACAGACACGAgctggattcaaaaacaattgACCCTAAGGTGGCCTTTCCGCGTAGAGCTCAGCCGAAGCTGGTTACGAGAACAAAGAAGATCTTTGTCGGAGGACTGTCTGTCAACACCACCATCGAAGATGTGAAACAGTATTTCGATCAGTTTGGAAAGGTTGATGACGCGATGCTAATGTTTGACAAAACCACCAACAGGCACCGAGGTTTCGGCTTTGTGACCTTTGAGAATGAAGACGTGGTGGAAAAGGTCTGCGAGATCCACTTTCACGAGATCAACAACAAGATGGTGGAGTGCAAAAAGGCACAGCCGAAGGAAGTGATGTCACCGACAGGTACGGCGCGAGGCCGCTCCAGAGTGATGCCCTACGGCATGGACGCCTTCATGCTGGGTATCGGCATGCTGGGTTACCCAGGGTTCCAGGCGGCCACTTACGCCAGTCGTGGATACACAGGAATCACACCAGGATACACGTACCAGTTCCCAGAATTCCATTTAGAACGGACACCCCTCCTGACTTCCTCTCACCCCCCAGAGATCACAGCCATTCCACTGACGGCCTACGGACCAATGGCAGCGGCGGCGGCTGCAGCGGTGGTCAGAGGTTCCACCCCATCACGTACCGCTGGCTTCCTGGGCACCAGCAGCCCTGGGCCAATGGCAGACCTGTATGCAGCAGCCAATCAGGATTCAGGAGTCAGCAGCTATATCAGTGCGGCAAGTCCCGCCCCCAGCACAGGGTTCGGACATGGACTCGGGGGTCCTTTGATCGCAACGGCCTTCACCAATGGCTACCACTGAGAGGCGTCCAATCAGAGTGCAGCGTGGGAGCAGAAACTCACGCGCTTGTGAACCGTGAGCACGGCTGACGATGCGATGCGCTTTTGGGACGAACCCCGCGGACGGCTGCGGTCCCTCCTGACTCCGCTCTGGAGTTTccaccttttcttttttctctattctctaCTAACATCACTTTTTCGTTTTCCTCATCCCGTATCTTCTTCCTGACTCATTTATGATATGCTGCCGTCTGtcttttgaaagaaaagaaaatgaagaaaaaaaaaaacattgtcaaaaACTATACTGTTTGATTGTACGTGCGGAAACACGCAAGGAATTTCGTTTCcccggatttttttttttggcaagtttttctgcatttgttatgtatttttgctgactgtgtttttatgtttttactgtactcaTGCTGTAACGGATGATGATGtcgagaaagacagagagagagagagaaagagagagaaggagcacGAAACTGGAAAAAATCCCAGATTTGTTTGGTTTCGAACGCAGAACAAATACGTGAGAACGAATCAAATTTACGAAAAacgaaacaacaaaaaaaaacaggacaaaaatgtatattttggtaGTTTTTACacagcatttataatgttattacgAACATTCGTAAACTGAATCGGTTATTTTTTTCGTAAGATTGGTTTTTACACGAGAAACGATGGGCCTCGCTCATGAATCTGCGTTCTTTTCAGATGTGAGAATATTCGACACATTTTTACCCAGAAATCTGTGCCGAGGCTCATTGTTCGGCTTCTTTTTGTAGATACTGTACATATTGCATGGATTTCGGGAGGGTTCGAGGGTTCGCATTGAACGACGGACTGGGGGTTGCGGGAGGGTTGAGGGTCCTTTATGGTTTTTAACACGCAAACGTCTTTCTTCACATTGAATCTTGCATTTCTGAGACGAGTCGCACGAACCCGGTTGGACCGATGTGGGTCTTTGGTTGTGCTTCTCTCGTTTTTTCGACTACTTTATACTACGATCAAACCTTCGATGCTTTTCCGGACTAAATTCTCCGAATCAACAGGTTGCTCTGGTTTTGTACGCTTTACCATTGGGAAAGCGCGCTCTTTGATGTCACTTCGGAGGCGTCAAACCAGCTTGCGTTTTCCATTAAAGCGAACAATTTGGTCCAGTTTTTGGTCCTCGGTTTCAAAGAGCACGGCTCCTGGGCTTCTCTTCGCGCCGGTtttggaaatatatattatatatatacattttttgcgCAGTGTACTTGTAAATCTTTCCCgttttcttctctctttacGTTTTCCGACGGTACAATGCTGTTTTTTGAAGAAATGAAGGACAAATTTACAAAGCAAAGGAGCCCGAGCGCTGTTTCACCTGTCGTTGTGCGTTCGGGTGCGTGTGTGACTGCTTAGACTGAAGTATGGATGTACACGTAGCTAGTTTACATGCATTCAACTGCCACCTTTGAAACTGTCTCGTCTCTTGCCTGTAATATAGAGGAACGTCTCTGACATCACAGCTCTAATGGAGGCCTTCCGGAGAAAAATTGTCCCGCTCGACTAATAACGCGCACCCAGAGTGATCcgtcgttgtttttttttccttttcatttcagCAACATTGAATCTGTTCGGTTTCTACTCAACTGCATTCGTTTTCAGTCTTCCATTTGATAAGTGTCGCCTCTTTTTGGAGCGGGTGGTCACGCGACGACCGAAACTCCGGCTGACAGGGACGCCTCACAAAACTACTGCACGGCACACACTGTAACTATTTAACCGACAAAAAAGcaataagttatttttaaactcAAGTAATAACGAGCGCCGTTAACGGTGGTACGAATACGATGGCGGTTACGTGGCATTAagaattatttttcagaaaaaaaagaagctatatTTTTCAAGATCCGTTTTAACCCCTTGAAAGTTTCTCAGATTTTTACCGTACATGTTAGCTGTTTGTTTGGAGGATTTGTTGAAGAGGATCGGCGGCGGAACTGGAAAGCATCAGCGGgcggcgctccgtcccgttGCTGTGGAGCTGCACGTCAACACTGTGACCTGATGCTCAAATACGCTGGTCCGCTGGccctttactgtatttttttatttttcacctcTGGAAATTTTCAAGTAAAAAGAtcctaataaattattttaaaacattcca

Function

NR:

description
PREDICTED: RNA-binding protein Musashi homolog 1

GO:

id name namespace
GO:0003676 nucleic acid binding molecular_function
GO:0000166 nucleotide binding molecular_function

KEGG:

id description
K14411 MSI; RNA-binding protein Musashi

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240476.1 True 3319 mRNA 0.47 14 32315687 32342744

Neighbor

gene id symbol gene type direction distance location
zgc:73226 zgc:73226,LOC107704030,LOC107725129,LOC107594543,LOC107557574 coding downstream 5547 32301359 ~ 32310140 (-)
rabl6a rabl6a,LOC108427817,LOC107725084,LOC107667101,LOC105021747 coding downstream 211901 32082560 ~ 32103786 (-)
ajm1 zmp:0000000794,cunh9orf172,LOC107725135,LOC107666534,LOC107557588,LOC107715543,LOC107654331 coding downstream 248473 32049652 ~ 32067214 (-)
pbx3a pbx3a,LOC107668307,LOC107591489,LOC107725095,LOC107654303,LOC107715538,LOC107550583 coding downstream 299219 31979887 ~ 32016468 (-)
mvb12ba mvb12ba,mvb12b,LOC107591487,LOC107666228,LOC107654329,LOC107725155,LOC107557586 coding downstream 354839 31943855 ~ 31960848 (-)
ostf1 ostf1,LOC107704065,LOC107748057,LOC107659617 coding upstream 73481 32416225 ~ 32421598 (-)
LOC122345374 LOC107748054,LOC107557581,LOC107704095,LOC107725138,LOC107594549 coding upstream 116714 32459458 ~ 32464623 (-)
bmpr1ba bmpr1ba,bmpr1b,LOC107725167,LOC107704129,LOC107594551,LOC107667882,LOC107725174 coding upstream 295516 32638260 ~ 32681474 (-)
pdlim5a pdlim5a,LOC107725153,LOC107704103,LOC107725180,LOC107594568,LOC107564363 coding upstream 341769 32684513 ~ 32719171 (-)
opn4xb opn4xb,LOC107704143,LOC107725176,LOC107667875,LOC107564366 coding upstream 382154 32724898 ~ 32733732 (-)
G41065 NA non-coding downstream 337221 31977714 ~ 31978466 (-)
G41064 NA non-coding downstream 338636 31975936 ~ 31977051 (-)
G41047 NA non-coding downstream 410900 31723742 ~ 31904787 (-)
G41051 NA non-coding downstream 517419 31797709 ~ 31798268 (-)
G41037 NA non-coding downstream 583428 31712351 ~ 31732259 (-)
G41177 NA non-coding upstream 43383 32386127 ~ 32386472 (-)
G41198 NA non-coding upstream 95875 32438619 ~ 32439145 (-)
G41191 NA non-coding upstream 101538 32444282 ~ 32445281 (-)
G41216 NA non-coding upstream 134518 32477262 ~ 32477840 (-)
G41217 NA non-coding upstream 137611 32480355 ~ 32480713 (-)
LOC122346085 LOC107748069,LOC107679343,LOC107594586 other downstream 1056 32283537 ~ 32314631 (-)
LOC122346090 LOC107704013,LOC107725152,LOC107748063,LOC107654332,LOC107557589,LOC107594564 other downstream 21905 32214031 ~ 32293782 (-)
tnca zmp:0000000846,LOC107715542,LOC107557573,LOC107591511,LOC102306937,LOC107725145 other downstream 141623 32113896 ~ 32174064 (-)
G41035 LOC107734367,LOC107665727,LOC107725151,LOC107591476,LOC107654325,LOC563292 other downstream 592781 31721270 ~ 31722906 (-)
apooa apoo other downstream 603950 31702453 ~ 31711737 (-)
LOC122345737 egflam,LOC107704151,LOC107667876,LOC107725173,LOC107725080,LOC107564362 other upstream 395673 32738417 ~ 32757869 (-)

Expression


Co-expression Network