LOC122345946 (LOC107740017,LOC107662084,LOC107702896,LOC107548503)


Basic Information

Item Value
gene id LOC122345946
gene name LOC107740017,LOC107662084,LOC107702896,LOC107548503
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 27391394 ~ 27393627 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240502.1
CTACACCTGCTGCTCCCGTGGGGCTGTTGTCATGGTAACGCGTGTACGCGGGCTGCGAAGCGCCCTCCGGTGCGCGCTAAAACACCCGGGAAAGACCCCGTTTACAAGCACCGTTTCACCTGACCGTACCGCATTCGACCGACGCGAAGCACGCCACAGAGGGATGACGATAACGAGGGGACGTCTTCCAGTACGACCTCCAGTCCTGCAGTAGAGCGTTTCTCCAGAGATGTCTGCGCTGAGTGACTCCGGGATCGAGGAAGATCTGCACGCTTCTCCGGCAGAGACCTCCAGGCTGACCTCGGAGCTGCAGGAGTGTGACTACGAAGAGAGCTGCTTCATCATCCAGAGACACAATGAAGTGCACTTTCTAGCGCTGGACTGCCTCGCGAGACAGCCGCAGATTACAGCAGAAGCTCGCAGTAAGCTGGTCAGCTGGCTCATAGCCGTACACAGACAGCTCAAACTGTCCTTCGAATCATGCTGCTTGGCTGTTAACATCATGGACCGTTTCCTGATCACAACCTCGGTAGCTGCAGACTGTTTCCAGTTACTGGGAGTGACGTCTCTGCTGATCGCCACAAAACAGGTCGAAGTGTATTCGCCTCTGATCACACAGCTTCTGTCGCTTTGCTGCAATTCTTTTACCAGAGAGCAGCTGTGCAACCTTGAATGCCTGATCCTTCTCAGACTCAATTTCAGACTGGCTGCACCTACCCTCGCTTTCTTTCTGGAATATTTCACCAGACACCCTACCGGATACCAGACTGAGGGAGCCACGGATAAGATGGTCGCTACACAGGACAGAAACGTATGGAAGGAGCCCGAGAAATGGTTGGCGTGCAAAGTCTGTGAACTGAGTTTGGCCGACTACACGTTTAACAAGTATATGCCGTCTGTGATTGTGCTGTGTGCCATGAAAGTGGCAAAAGATCTGCTGAAGACGCATTCAGCGCAGCCGACAGACAGCTATGCTGGCTCATCACAGACACTGGAGTCTTTCTGTTTTCAAGAGTACCCAGCGTTTGAAGCTGAGCTTTTGTTTCAGCAATGCACAGAAGATCTCAAATTGTTGGTTGCTCTTAATCAAGACATAGTCCAGGACTTTATAACACCATGAACCATTATTAATATGTTCCACGGAGTGATCAGATTGACCCAAGTGATTCAACTCAAGTGATTCATCTGAAGAAAGTTGCAGAAAAAGATACTGtaataaccatttttttataatgctgttTCCTTCATACGTTTATAATACACATAAAACGATTTGTAATGGAGTCAAGCAGTGTTTATCCCAAAAGCTATTTATGCAAAAGCgcggttttatttttcattcatgtgTAAGTAGTGTGTACCTCGaacttttagaatttttatttgtaaaatcgGATTGTCaatcataaaaaagca

Function

NR:

description
PREDICTED: cyclin-O protein B-like

GO: NA

KEGG:

id description
K10861 UDG2, CCNO; uracil-DNA glycosylase 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240502.1 True 1416 mRNA 0.48 3 27391394 27393627

Neighbor

gene id symbol gene type direction distance location
smtnb smtn,LOC107739992,LOC107662053,LOC107702966 coding downstream 1396 27343490 ~ 27389998 (-)
inpp5jb LOC107739994,LOC107548522,LOC107702965,LOC107662051,LOC107556011,LOC106585266 coding downstream 56596 27312889 ~ 27334798 (-)
mat2ab mat2ab,LOC107548521,LOC107662054,LOC107739995,LOC107556049,LOC107722750,LOC107702964,LOC106580346 coding downstream 83186 27302259 ~ 27308208 (-)
usp39 usp39,LOC107662055,LOC107739996,LOC107702962,LOC107722749 coding downstream 97908 27288172 ~ 27293486 (-)
spaw LOC107548501,LOC107662086,LOC107740019 coding downstream 111003 27277047 ~ 27280391 (-)
tut7 zcchc6,LOC107740015,LOC107662083,LOC107702897,LOC107728196,LOC107556044,LOC107556045 coding upstream 5786 27399413 ~ 27414999 (-)
psat1 psat1,LOC107548526,LOC107556046 coding upstream 21681 27415308 ~ 27421004 (-)
tmem116 si:ch211-157p22.10,LOC107740032,LOC107548513,LOC107556047,LOC107728188,LOC107662092,LOC107702969 coding upstream 28129 27421756 ~ 27431616 (-)
zgc:153044 NA coding upstream 40950 27434577 ~ 27436450 (-)
kiss1rb kiss1rb,LOC107728362,LOC107702921 coding upstream 45454 27439081 ~ 27445470 (-)
G39893 NA non-coding downstream 105200 27285182 ~ 27286194 (-)
G39888 NA non-coding downstream 124165 27265289 ~ 27267229 (-)
G39872 NA non-coding downstream 157232 27232658 ~ 27234162 (-)
G39870 NA non-coding downstream 165832 27224887 ~ 27225562 (-)
G39857 NA non-coding downstream 202172 27188850 ~ 27189222 (-)
G39935 NA non-coding upstream 144861 27538488 ~ 27538861 (-)
G39936 NA non-coding upstream 145313 27538940 ~ 27539327 (-)
G39951 rgs3a,LOC107702900,LOC107728018,LOC107556028,LOC107558862,LOC107693410 non-coding upstream 256823 27650450 ~ 27650827 (-)
G39964 NA non-coding upstream 354833 27748460 ~ 27789829 (-)
G40021 NA non-coding upstream 502016 27895643 ~ 27895961 (-)
LOC122345426 smpx,LOC107705278,LOC107671350,LOC107590224,LOC107663668,LOC107586736,LOC107721880 other downstream 284009 27099815 ~ 27107385 (-)
LOC122344921 NA other downstream 1822708 25561974 ~ 25568686 (-)
G39413 LOC102215562 other downstream 2109108 25281886 ~ 25282286 (-)
LOC122345923 NA other downstream 2632726 24754202 ~ 24758668 (-)
naa38 naa38 other downstream 2642784 24746672 ~ 24748610 (-)
LOC122344874 NA other upstream 492414 27886041 ~ 27895454 (-)
G40080 pappaa,pappa,LOC107556005,LOC107558864,LOC107739977,LOC107675511,LOC107728218 other upstream 862201 28255828 ~ 28264704 (-)
LOC122345120 LOC107728794,LOC107696375,LOC107590009,LOC107739482 other upstream 1930355 29323982 ~ 29326115 (-)
G40182 brinp1,LOC107715673,LOC107674904 other upstream 2066958 29460585 ~ 29490204 (-)
eng LOC107562335,LOC107704777,LOC107741503 other upstream 2221092 29614719 ~ 29655061 (-)

Expression


Co-expression Network