tctn2 (LOC107704714,LOC107741513,LOC107599155)


Basic Information

Item Value
gene id tctn2
gene name LOC107704714,LOC107741513,LOC107599155
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 1796834 ~ 1806041 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240534.1
GAGGCGATCTATCCCGTGCAGCGCCGACGCGTTCACACAAAGAAGAGGGTTCGCTTTACCAGCTTTACTATGGCACGATTATCATCCTCTCACGGCGTATTTCAgtttacatttatgattatcaTGCTCTTAAATGACGGCACTGTTTGTAATGTAGtgtttcagCCCGCGTTTATTCTGGCATCCGGTCCGAGAATATCATCTTTTTTGGTTGGAAACGTATCTGGCATTTCCTTCAGCCTCAGATCCGTTTCATCATCAAATGCAACAGGTAGCATCCCGTCTTCATCCTGCGGGCCAGGTTTCCAAACACAGTGGAATCTATCAAATGAATTAATTGGGAAGAATGCCATCCAGGTGCGACTGTGTCTGAACCGCAGTCTGCAGCTGTGTGGGAATGAAGCATCTGTCCCGGACTGCTGCCTGGAGCCACTGTGTCTCCAGGAGACTCTCCTCTTGTCTGCATGCGTGGGTGAAACCCCCAAAGCCTCACTCATTATACAGACCCAGATTTATGCCCAGATTGTCCCCAACAAACCCCCGTCTGaaaataaaactgtCGTTCCCAACCAAGTGTTTGAGCCTCTGGGCCGCTGCCCGTGTGATGTTTCTCCAGGCGTGTGTGACATACGCTGCTGTTGTGACCAGgactGTACTCAAGAAGCTCTGGGGTTGTTTATGTCTCAGTGTCTTCCTGGACCTTTCGGGGGAAATTTCAGTACTGTTCCAGAGTATCAGTGCTCAGCTCAGTCCTCTGGAAATGACCCTGATTGGTTCCCTTTTCTGTGCGTCACCTCCCCTTCAGACAACAACCCCTTTCTGGGACTTTTCTACAATGGTGGGACAGTctctCCAAAGCCTCGTCCATCATTTCAAGCCCTGCGGATGACAGCTCCTGTCCCTGCCATTAGCTACCGCCAGGGCGATCCAATATTCACTAAGGATGAGCAGTATTTCACCGTCCCACAGAAGTCTGGACTGGGCCAGTGTGCAGAAAATGCTCCAGTGGCCTTTTTGGAAAACTTTGAGTCTCGGTGCGTGAGGAGATTGGAGTCCTGTCCACCTGCTTCTGATGACCTGAGAGTGGATATTAAAGATGGACTGGGAGGTATAATCACAGTCAGCGTTGTGGATGAAATTGCTGATGACCTCAGATCATTTCTGTCAAATTCTCGTGAGCCTGTATCTGtgccaCAGCAGTGTGCCGTTGTTGTGGCCTTGCGTTACACTCTTTACTGGAGCGAGAACGGCCTCACTGACGTTACTGTGACACGGACCTCTGGGAACATCACCGTACCCGTGTCTCTGACCCGAATATACTCTGTGGTGTTTGTGAATGGAAATGAAACATCTCAGCCGAATTCTAACAATACAGGTTACCAGGTGAAGAGGCCAGTGATTGGTGGCATTTTAGACTTTGATACAGAAGTAATACAGAGGGCCCAGATCAATCAGTGGCAACCAGGTGGAGATGGCCTGTGCTCCTCTGCTGAATTGAAACCAGTTCTGTTTGGGATCAACTCCTCATCAGGCTGTATGATTCCTGCGAGTCTGCTGAACGTGACGCAGTGCAGTCTTTTGAGAGAAGCAGTACGTGATGTCCTCGCTGAATTGGTGTCTGCTACACTCGTCTCCACAACAGGAAATCCAAACTTTTCCAACTTATCAGACTGGGTCAACATTACTACTTCAGTGCAGAACTCCAGTCAGCCAGCAGAGAGCAGCACTGGAGAGTGCTCAGCTGTTCCCACCCACCTCCGCATCCACGTGTGGAGCGGCATCATGGGAAGTGGGCAGGGATCGCCTCAGACGTTCATCCAAGCAATGGAGATTAGTTTCGTAGAAACATCATGGAGGATAGAGTGTGGTATGGGCAAGGAGAACTCCTGTTTAAACCCAGAGCTAATGCAAAATTTCCCCGTGACCTCGTCTGTGACCTTTACTGACAATCCTCTTATCACACAACCCCCTAGATCCAGGTTCAGTATTAACTTCACTGAGTTTGACTGTGACAGGAACGATGTGTGCTGGCCTGAGCTGGCCTTCCCTCTCACGAGATACTataccggtgAGCCGTATTCTGAGGCTTTGGCTAAAGGTCTCATCCTAGTATTCTTCTTCATCGCTGCGTCTGTTTTAGGAACGCCGTGGAGACAAATCAGACAGGCATGGAATACTGCTTCATTATGAAAGCCAGCAAAAGATTATCTATTAAATCGAATTTGATGTTCAGTTGTAAATAGgtgtaaatacataatttattgtCCTTTTCtggtttatataaaatatgaataacttAAAGATTTTGTagtcacatttattatgtataaagaagttttgtattt

Function

NR:

description
tectonic-2 isoform X2

GO: NA

KEGG:

id description
K19361 TCTN2; tectonic-2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240534.1 True 2345 mRNA 0.48 18 1796834 1806041

Neighbor

gene id symbol gene type direction distance location
ccl19a.1 LOC107704652,LOC107741512 coding upstream 396 1794534 ~ 1796438 (+)
ydjc LOC107741491,LOC107704612,LOC107599608,LOC107755843,LOC107668745,LOC107599128 coding upstream 17408 1773965 ~ 1779426 (+)
LOC122344671 LOC107755842,LOC107599645,LOC107599132 coding upstream 51663 1743315 ~ 1745171 (+)
ppil2 ppil2 coding upstream 144418 1623097 ~ 1652416 (+)
gal3st1a gal3st1,gal3st1a,LOC107741514,LOC107653284,LOC107755837,LOC107668734 coding upstream 174507 1616062 ~ 1622327 (+)
sec14l8 sec14l8,LOC107741494,LOC107599607,LOC107668747,LOC107704732,LOC107755846,LOC107599126,LOC108431737,LOC108255515 coding downstream 909 1806950 ~ 1820557 (+)
LOC122346045 ddr2l,LOC107704361,LOC107550294,LOC107725118,LOC107667359,LOC107723312 coding downstream 45566 1851607 ~ 1864706 (+)
LOC122346048 prodhb,prodha,LOC107730849,LOC107704395,LOC107661597,LOC106568196 coding downstream 59554 1865595 ~ 1876048 (+)
LOC122345240 rab5aa,LOC107592022,LOC105904716,LOC101476881,LOC100701272 coding downstream 72044 1878085 ~ 1880008 (+)
LOC122345241 kat2b,LOC107748684,LOC107696888,LOC107593605,LOC107592021,LOC107739562,LOC107688328,LOC108411559 coding downstream 75974 1882015 ~ 1892104 (+)
G32552 NA non-coding upstream 11192 1785401 ~ 1785642 (+)
G32542 NA non-coding upstream 29944 1766596 ~ 1766890 (+)
LOC122346170 NA non-coding upstream 31427 1762921 ~ 1765407 (+)
G32540 NA non-coding upstream 34552 1762005 ~ 1762282 (+)
G32539 NA non-coding upstream 34863 1761564 ~ 1761971 (+)
G32643 NA non-coding downstream 152077 1958118 ~ 1958584 (+)
G32644 NA non-coding downstream 160138 1966179 ~ 1966378 (+)
G32646 NA non-coding downstream 185508 1991549 ~ 1993168 (+)
G32642 NA non-coding downstream 189979 1996020 ~ 1997056 (+)
G32649 NA non-coding downstream 192138 1998179 ~ 1998680 (+)
ccl19a.2 ccl19a.2,LOC107704660,LOC107755825,LOC107599642,LOC107668736,LOC107599131,LOC107741495 other upstream 3568 1791828 ~ 1793266 (+)
selenoe fep15,LOC107667262,LOC107566481,LOC107750764,LOC108443918,LOC101066385,LOC105931211,LOC100703742 other upstream 681429 1112264 ~ 1115405 (+)
G32277 NA other upstream 739681 1055193 ~ 1057153 (+)
tal2 tal2,LOC107594599,LOC107725114,LOC107723303,LOC107667406 other upstream 1345469 450168 ~ 451365 (+)
LOC122346012 cunh9orf84,LOC107704297 other upstream 1349348 432779 ~ 447486 (+)
G32611 prrc2b,LOC107704672 other downstream 16613 1822654 ~ 1826114 (+)
G32620 prrc2b,LOC107704672,LOC107562325 other downstream 29107 1835148 ~ 1843013 (+)
LOC122346050 nutf2,LOC107726276,LOC107692933,LOC107733565 other downstream 94586 1900627 ~ 1905499 (+)
LOC122345711 LOC107556260,LOC107714787,LOC107691117,LOC107551460,LOC107715220,LOC107690391,LOC565819 other downstream 204176 2010217 ~ 2019150 (+)
G32706 LOC107560224,LOC107681222,LOC107709689,LOC107690695,LOC107757958,LOC107587469 other downstream 459104 2265145 ~ 2268194 (+)

Expression


Co-expression Network