sec14l8 (sec14l8,LOC107741494,LOC107599607,LOC107668747,LOC107704732,LOC107755846,LOC107599126,LOC108431737,LOC108255515)


Basic Information

Item Value
gene id sec14l8
gene name sec14l8,LOC107741494,LOC107599607,LOC107668747,LOC107704732,LOC107755846,LOC107599126,LOC108431737,LOC108255515
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 1806950 ~ 1820557 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240563.1
GACACGAGACATCACTGAGCGCTCGCGGTCTATCAGACTCGAGCTGATTTCTAGACAGTTATTCGTGGTGTACTCGTGGCGACATGAGCGGAAGAGTCGGAGATCTGAGCGTGAAACAAGCCGAAGCTTTGGCCCAGTTTCGAGAGAAAGTTAAGGATATTCTACCCCAGTGTCCATCCCAGAGTGACCACTTTCTGCTTCGATGGCTGAGAGCCAGAAATTTCAATCTTCAGAAAGCCGAGGCCATGCTGCGCAAGCATATGGAATTTAGGAAACACATGAAAGTTGACACCATCCTTACGGAGTGGCAGGTGCCAGAGGTAATAGACAAGTATCTGTCTGGTGGCATGTGTGGCCATGACCGTGAAGGGAGCCCCGTCTGGTACGATGTCATCGGGCCTTTGGACCCTAAGGGTCTGATGCATTCGGCGTCTAAGCAGGACTTAATCAAGTCTAAAGTCAGGGACTGTGAGATTCTGCAGAAAGAGTGCGACCTACAGAGTCAACGGcTGGGTAGGAACATTGAGTCCATTACTATGGTTTATGACTGTGAAGGTCTGGGAATGAAGCACTTATATAAGCCTGCTATAGAGACTTACGGagagGTTCTCACTATGTTTGAAGACAACTATCCAGAGGGACTCAAGAAGTTATTTGTCATTAAAGCACCCAAACTGTTTCCTGTGGCTTACAATCTGGTGAAACATTTTTTGAGTGAGGACACTCGCCGGAAGGTCGTCGTCCTGGGATcAAACTGGCAGGAGGTTTTACAGAAATACATTGACCCTGAGGAGCTCCCAGCATTCTATGGAGGTAAACTGACCGACCCTGATGGTGACCCCAGATGTAGAACTAGGaTTACATTCGGGTCAGAGATTCCCAAGACCTACTATGTTCGAGACTCCATTAAAGTGGACTATGATGAATCTGTGACTATCGGCCGGGGCTCATCTCATCAGGTGGAATATGAGCTACTTGCACCAAACTGTGCTCTAAGatggcaATTCACCTGTGATGGCGCTGACATAGGTTTTGGTGTatataagaagaaaaagattGGAGAGTGGATGAAGGCCagtgaaatgaatgaaattgtgCCAAATCAGCGTTACAATGCGCACCTGGTGCCCGAGGACGGATCGCTCACCTGCCCTGAGCCAGGAGTGTatgTGCTGCGGTTTGACAACACATACAGCATCTTCCAGTCCAAAACGGTCAGCTTCACAGTGGAGGTCCTCCTACCTAGtcaaatcaaccaatcagaacgctAGAAATAACGGCAACAAGCAATTGATTGAGATTGTGAATCGCAAAGAAATTGAAAAGCATGACCAACTCATGgcattttatacagtatatctgCTGTACATAATGaaggaaaatattattataatgctgCTCTCGAAAAGGAGAGTGTGTACATGGATTAAACTGACTAATCGCTGCATTAAAAGTGGTTTCATCCGCTAATATATATCTGGATCTAGACTCTGATGCCAGTGTGATTCTCTTAGCTTAGCTTGGTTTAGTTAGTTTAGCTGAAGCTGTTATCAAATTGATTTATCGTGTATTAATGAAGTGTTGAGCTTATCAGTGAGCTCTGGTGTAATTACTCGACTGAAACTGTCTTGGTGTGTATTGTTGGAGCTTACCCCTCTTTATGATTGCCTTAACTCATGCTCTTGAATTTTCTGTATCTGTTTAGTTCCTTTTTATCGTGAGATAATTTAGATAATGAACTCTGAGTCTGCACGGTTTTCTCCCAGAATGTGGTAAGAGGTTACATTATTACCCACTTTTATGTTAtcagcacacacaaatatgatacaccttttgaaatattttgtttacaaagaGCGTGACTTGATACAGAGTATGACGACGTCATGGGTggcatgctttgttttaatccTCTTTAATTAATTGAACTAATTGATGTTGTAAACTTTTCATAGTAAGATTTTATACCTCAGGTCCTTGTGTTTACAGTAACAGTGCCTGTATTTGATTCCAGCAACATGTATCTGTCTTGTAAGTGATCACATTGTATTTTGTCTGATTTTTGTCTGttgattttgtaatattaatgtaatttataagtgatattgtattgattttcattaactaattaaatgtatacattagcAAAA
>XM_043240564.1
CGAGAGAAAGTTAAGGATATTCTACCCCAGTGTCCATCCCAGAGTGACCACTTTCTGCTTCGATGGCTGAGAGGTGAGCTACTTCACTCACGTTCGTGATGCACAGCGAGCAGCCAGAAATTTCAATCTTCAGAAAGCCGAGGCCATGCTGCGCAAGCATATGGAATTTAGGAAACACATGAAAGTTGACACCATCCTTACGGAGTGGCAGGTGCCAGAGGTAATAGACAAGTATCTGTCTGGTGGCATGTGTGGCCATGACCGTGAAGGGAGCCCCGTCTGGTACGATGTCATCGGGCCTTTGGACCCTAAGGGTCTGATGCATTCGGCGTCTAAGCAGGACTTAATCAAGTCTAAAGTCAGGGACTGTGAGATTCTGCAGAAAGAGTGCGACCTACAGAGTCAACGGcTGGGTAGGAACATTGAGTCCATTACTATGGTTTATGACTGTGAAGGTCTGGGAATGAAGCACTTATATAAGCCTGCTATAGAGACTTACGGagagGTTCTCACTATGTTTGAAGACAACTATCCAGAGGGACTCAAGAAGTTATTTGTCATTAAAGCACCCAAACTGTTTCCTGTGGCTTACAATCTGGTGAAACATTTTTTGAGTGAGGACACTCGCCGGAAGGTCGTCGTCCTGGGATcAAACTGGCAGGAGGTTTTACAGAAATACATTGACCCTGAGGAGCTCCCAGCATTCTATGGAGGTAAACTGACCGACCCTGATGGTGACCCCAGATGTAGAACTAGGaTTACATTCGGGTCAGAGATTCCCAAGACCTACTATGTTCGAGACTCCATTAAAGTGGACTATGATGAATCTGTGACTATCGGCCGGGGCTCATCTCATCAGGTGGAATATGAGCTACTTGCACCAAACTGTGCTCTAAGatggcaATTCACCTGTGATGGCGCTGACATAGGTTTTGGTGTatataagaagaaaaagattGGAGAGTGGATGAAGGCCagtgaaatgaatgaaattgtgCCAAATCAGCGTTACAATGCGCACCTGGTGCCCGAGGACGGATCGCTCACCTGCCCTGAGCCAGGAGTGTatgTGCTGCGGTTTGACAACACATACAGCATCTTCCAGTCCAAAACGGTCAGCTTCACAGTGGAGGTCCTCCTACCTAGtcaaatcaaccaatcagaacgctAGAAATAACGGCAACAAGCAATTGATTGAGATTGTGAATCGCAAAGAAATTGAAAAGCATGACCAACTCATGgcattttatacagtatatctgCTGTACATAATGaaggaaaatattattataatgctgCTCTCGAAAAGGAGAGTGTGTACATGGATTAAACTGACTAATCGCTGCATTAAAAGTGGTTTCATCCGCTAATATATATCTGGATCTAGACTCTGATGCCAGTGTGATTCTCTTAGCTTAGCTTGGTTTAGTTAGTTTAGCTGAAGCTGTTATCAAATTGATTTATCGTGTATTAATGAAGTGTTGAGCTTATCAGTGAGCTCTGGTGTAATTACTCGACTGAAACTGTCTTGGTGTGTATTGTTGGAGCTTACCCCTCTTTATGATTGCCTTAACTCATGCTCTTGAATTTTCTGTATCTGTTTAGTTCCTTTTTATCGTGAGATAATTTAGATAATGAACTCTGAGTCTGCACGGTTTTCTCCCAGAATGTGGTAAGAGGTTACATTATTACCCACTTTTATGTTAtcagcacacacaaatatgatacaccttttgaaatattttgtttacaaagaGCGTGACTTGATACAGAGTATGACGACGTCATGGGTggcatgctttgttttaatccTCTTTAATTAATTGAACTAATTGATGTTGTAAACTTTTCATAGTAAGATTTTATACCTCAGGTCCTTGTGTTTACAGTAACAGTGCCTGTATTTGATTCCAGCAACATGTATCTGTCTTGTAAGTGATCACATTGTATTTTGTCTGATTTTTGTCTGttgattttgtaatattaatgtaatttataagtgatattgtattgattttcattaactaattaaatgtatacattagcAAAA

Function

symbol description
sec14l8 Enables GTP binding activity; GTPase activating protein binding activity; and GTPase activity. Acts upstream of or within with a positive effect on angioblast cell migration from lateral mesoderm to midline. Acts upstream of or within Wnt signaling pathway, calcium modulating pathway; positive regulation of epiboly involved in gastrulation with mouth forming second; and regulation of convergent extension involved in axis elongation. Is extrinsic component of plasma membrane. Is expressed in blastomere; posterior cardinal vein; trunk vasculature; vascular cord; and vasculature. Orthologous to several human genes including SEC14L2 (SEC14 like lipid binding 2) and SEC14L3 (SEC14 like lipid binding 3).

NR:

description
PREDICTED: SEC14-like protein 2

GO:

id name namespace
GO:0006810 transport biological_process
GO:0005622 intracellular anatomical structure cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005215 transporter activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240563.1 True 2150 mRNA 0.42 12 1806950 1820557
XM_043240564.1 False 2050 mRNA 0.42 11 1807397 1820557

Neighbor

gene id symbol gene type direction distance location
tctn2 LOC107704714,LOC107741513,LOC107599155 coding upstream 909 1796834 ~ 1806041 (+)
ccl19a.1 LOC107704652,LOC107741512 coding upstream 10512 1794534 ~ 1796438 (+)
ydjc LOC107741491,LOC107704612,LOC107599608,LOC107755843,LOC107668745,LOC107599128 coding upstream 27524 1773965 ~ 1779426 (+)
LOC122344671 LOC107755842,LOC107599645,LOC107599132 coding upstream 61779 1743315 ~ 1745171 (+)
ppil2 ppil2 coding upstream 154534 1623097 ~ 1652416 (+)
LOC122346045 ddr2l,LOC107704361,LOC107550294,LOC107725118,LOC107667359,LOC107723312 coding downstream 31050 1851607 ~ 1864706 (+)
LOC122346048 prodhb,prodha,LOC107730849,LOC107704395,LOC107661597,LOC106568196 coding downstream 45038 1865595 ~ 1876048 (+)
LOC122345240 rab5aa,LOC107592022,LOC105904716,LOC101476881,LOC100701272 coding downstream 57528 1878085 ~ 1880008 (+)
LOC122345241 kat2b,LOC107748684,LOC107696888,LOC107593605,LOC107592021,LOC107739562,LOC107688328,LOC108411559 coding downstream 61458 1882015 ~ 1892104 (+)
LOC122346055 nutf2l,LOC107592026,LOC107748755,LOC107697171,LOC107688399,LOC107593625,LOC107739636,LOC108410494,LOC103027823 coding downstream 79038 1899595 ~ 1900425 (+)
G32552 NA non-coding upstream 21308 1785401 ~ 1785642 (+)
G32542 NA non-coding upstream 40060 1766596 ~ 1766890 (+)
LOC122346170 NA non-coding upstream 41543 1762921 ~ 1765407 (+)
G32540 NA non-coding upstream 44668 1762005 ~ 1762282 (+)
G32539 NA non-coding upstream 44979 1761564 ~ 1761971 (+)
G32643 NA non-coding downstream 137561 1958118 ~ 1958584 (+)
G32644 NA non-coding downstream 145622 1966179 ~ 1966378 (+)
G32646 NA non-coding downstream 170992 1991549 ~ 1993168 (+)
G32642 NA non-coding downstream 175463 1996020 ~ 1997056 (+)
G32649 NA non-coding downstream 177622 1998179 ~ 1998680 (+)
ccl19a.2 ccl19a.2,LOC107704660,LOC107755825,LOC107599642,LOC107668736,LOC107599131,LOC107741495 other upstream 13684 1791828 ~ 1793266 (+)
selenoe fep15,LOC107667262,LOC107566481,LOC107750764,LOC108443918,LOC101066385,LOC105931211,LOC100703742 other upstream 691545 1112264 ~ 1115405 (+)
G32277 NA other upstream 749797 1055193 ~ 1057153 (+)
tal2 tal2,LOC107594599,LOC107725114,LOC107723303,LOC107667406 other upstream 1355585 450168 ~ 451365 (+)
LOC122346012 cunh9orf84,LOC107704297 other upstream 1359464 432779 ~ 447486 (+)
G32611 prrc2b,LOC107704672 other downstream 2097 1822654 ~ 1826114 (+)
G32620 prrc2b,LOC107704672,LOC107562325 other downstream 14591 1835148 ~ 1843013 (+)
LOC122346050 nutf2,LOC107726276,LOC107692933,LOC107733565 other downstream 80070 1900627 ~ 1905499 (+)
LOC122345711 LOC107556260,LOC107714787,LOC107691117,LOC107551460,LOC107715220,LOC107690391,LOC565819 other downstream 189660 2010217 ~ 2019150 (+)
G32706 LOC107560224,LOC107681222,LOC107709689,LOC107690695,LOC107757958,LOC107587469 other downstream 444588 2265145 ~ 2268194 (+)

Expression


Co-expression Network