LOC122345991 (LOC107718358,LOC107553579,LOC107676641,LOC107680767,LOC107746876)


Basic Information

Item Value
gene id LOC122345991
gene name LOC107718358,LOC107553579,LOC107676641,LOC107680767,LOC107746876
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 15849821 ~ 15850648 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240602.1
CAGTCCTTCGGTCATAATCTGACTGACCCAGACATAACACAACCACAGATCAACAACAAGAAGACAATGAAGACTATCTCAGCTTGTGTTCTTCTCGTCTGCCTGATCGCTGTAGGGGTGAAAGGACAGGACAGGTCTTCAAGGGGCAGGTGTTTCTGTGTAGACAAAGGTGCAAACATGGTTTTAGTGAAGAACATCGAGAAGGTTGAAATCATTCCTCCAAGTCCATCTTGTCAACAACATGAGATTATtGTCACTTTGAAGAATGGAGCAGGACGGAAATGCATGAATCCAGAGTCCAAATTCACTCAAAACGTCATCATAAAGGCTATTGAAAAGATGAAGCAGCAGACACACAGTACAACTGTCTCTGTCCCAACGAGGAGCACCGGGACATCATCAGCTCCAACAGCCTTCAAATGACTTCATAGACTTCAGATGAATTCATATCCTGATTCATAAGTTGGGGttcaattaa

Function

NR:

description
PREDICTED: C-X-C motif chemokine 11-like

GO: NA

KEGG:

id description
K12672 CXCL11, I-TAC; C-X-C motif chemokine 11

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240602.1 True 478 mRNA 0.43 4 15849821 15850648

Neighbor

gene id symbol gene type direction distance location
LOC122345699 LOC107718358,LOC107553579,LOC107676641,LOC107680767,LOC107746876 coding downstream 5977 15842993 ~ 15843844 (-)
flot2a flot2,flot2a,LOC107746832,LOC107676660 coding downstream 11104 15821869 ~ 15838717 (-)
ncor1 ncor1,LOC107676644,LOC107746860,LOC107553567,LOC107680951,LOC107552540 coding downstream 165385 15616601 ~ 15684436 (-)
LOC122345891 NA coding downstream 233359 15614467 ~ 15616462 (-)
LOC122345011 NA coding downstream 238727 15605437 ~ 15611094 (-)
grsf1 grsf1,LOC107746834,LOC107680726,LOC107579879 coding upstream 24945 15875593 ~ 15878477 (-)
si:dkey-245n4.2 si:dkey-245n4.2,LOC107746839,LOC107580348 coding upstream 64716 15915364 ~ 15922607 (-)
rtkna rtkn,si:dkey-40c11.1,LOC107676668,LOC107746864,LOC107681349,LOC107718341 coding upstream 164138 16014786 ~ 16066861 (-)
smn1 smn1,LOC107660268,LOC107553605,LOC107719932,LOC107681471,LOC107746843,LOC107552536 coding upstream 234170 16084818 ~ 16087410 (-)
mccc2 mccc2,LOC107746845,LOC107680610,LOC107552565,LOC107660263,LOC107553609,LOC107719925 coding upstream 238417 16089065 ~ 16095337 (-)
G37064 NA non-coding downstream 35888 15812915 ~ 15813933 (-)
G37079 NA non-coding downstream 66816 15777713 ~ 15783005 (-)
G37076 NA non-coding downstream 100324 15747522 ~ 15749497 (-)
G37067 NA non-coding downstream 119928 15729203 ~ 15729893 (-)
G36986 NA non-coding downstream 135846 15713675 ~ 15713975 (-)
G37058 LOC107718333,LOC107746835,LOC107552574,LOC107680737,LOC107676661 non-coding upstream 10429 15861077 ~ 15865160 (-)
G37092 NA non-coding upstream 44036 15894684 ~ 15978740 (-)
G37093 aqp3a,LOC107552570,LOC107746837,LOC107680708,LOC107553599 non-coding upstream 55635 15906283 ~ 15910873 (-)
G37098 NA non-coding upstream 87472 15938120 ~ 15938836 (-)
G37212 NA non-coding upstream 480283 16330931 ~ 16332077 (-)
LOC122345695 LOC107718358,LOC107553579,LOC107676641,LOC107680767,LOC107746876 other downstream 2785 15846036 ~ 15847036 (-)
cxcl11.4 LOC107718357,LOC107746875,LOC107553578,LOC107676639,LOC107680777,LOC107552559,LOC107553571 other downstream 8143 15840326 ~ 15841678 (-)
fam222ba LOC107552581,LOC107746861,LOC107680853,LOC107676666,LOC107553569,LOC107680837,LOC107552580,LOC107746822,LOC107746829,LOC107680824,LOC107552579,LOC107676664,LOC107553594,LOC107718349 other downstream 41441 15742740 ~ 15808380 (-)
emc6 emc6,LOC107680863,LOC107746824,LOC107552584,LOC107553592,LOC107552561 other downstream 121713 15725027 ~ 15728108 (-)
cenpv cenpv,LOC107718355,LOC107676655,LOC107746825,LOC107680877,LOC107553589,LOC107552586 other downstream 140391 15703533 ~ 15709430 (-)
cxcl11.1 LOC107680787,LOC107552555,LOC107718351,LOC107553572,LOC107676630 other upstream 4272 15854920 ~ 15855808 (-)
cxcl20 NA other upstream 6592 15857240 ~ 15859335 (-)
LOC122344710 LOC107755722,LOC107681456,LOC107700059,LOC107553585,LOC107727439 other upstream 403304 16253952 ~ 16256992 (-)
LOC122344728 uprt,LOC107733222,LOC107672530,LOC107680369,LOC107748634 other upstream 525618 16376266 ~ 16378515 (-)
G37258 ncor2,LOC107687981,LOC107684513,LOC107753125 other upstream 746207 16596855 ~ 16633121 (-)

Expression


Co-expression Network