LOC122346005 (LOC107727699,LOC107595976,LOC107660332)


Basic Information

Item Value
gene id LOC122346005
gene name LOC107727699,LOC107595976,LOC107660332
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 24814609 ~ 24903289 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240626.1
CAGTTATTCTATTCGACGACTCTGGCAGTATCAGCCCAAAAATTTTGAAACGATGATCCAATTTATCAAGAACttaattgtgatgtttttggacAAACGAGCACAGGTGGCAGTGGCTAAATTCTCCACAAGAGTTTCGGCAGTCTTTCACTTTGAGAACTTTGCCGTGAATAAAGACCCCGAACAACTAATGAAAGATGTGACCCAGGCACAGGGcgatacacacacaccttcgGCAATACGTTTTGTTATAGAACAGATGTTTTCTGAGAAGGTGGGCATGCGAAACAACTCTCAGAAGTTATTGCTGGTGATTACTGATGGAAAATCAAATGACCCCAAAGAAGACTTTAAGAATGTCATCCTGAAAGCCAATGAAAGGGACATCACACGATTTGCCATTGggGTTGGTAAGGAGTATTCTCATCCTGAGCTGGAGCTGATTGCTTCATCTCCTCAATTTGTTTTTGAGACAGAGAGTTTCAGTGCTCTCACCTTGATACTAAACCAGCTAAGAGAAAAAATATTCTCTATTGAAGgAACTGACACAGGGAACTTTAGCTCTTTTCAGATGGAATTATCACAAGGGGGTTTCAGTGTGGCCATTTCAGAGGGTTCAAAGATTTTTGGAGCGGTTGGGGCATACTCCTGGTCAGGAGGAATGGTGCAGGGTCTTACTGATCAAATGCTCAATTCATCATTCATTAATGCCACAAATATGGAGGAGGATATTGCAGATTCCTACTTGGGTTACTCAATTGCTGTGGCACCAGTAAATGGTCATGTTGTGTATTTTGCGGGAGCACCAAGGCATAGACACACAGGGCTGGTCCTGGGCTTTAGAGAGAACAAATGGAACCACAGTTGGACCATCATTCATAGGATATATGGATCACAGCTCGGCTCATATTTTGGGGCAGAATTATGTGTGATTGGAGTTTCTGAGTTTTTAGCAGTCGGGGCTCCATTATATCATGCTCATGGAGTGGGAGGAGAGGTCCGGATATACTCACTAAACACTACAATCCAAGAACTCAAATGCTCAACGATTTTGCGTGGGGTGATGGGCAATGAGTTTGGCCGGTTTGGTACTTCTTTGGCAAACATACAGGACCTGAATGGAGATGGCTTTAAAGAGTTGGCAGTGGGGGCACCTCAAGAAGAGAAGGGCAAGGGTgcaatttacatatttttgggGCAATCAGGTGGTATCAGACCAGAATACAGTCAGAGAATAAGTGGAGCAGCTGTAGGAAGTGGGCTGCAGTATTTCGGAGTTGCTCTCCACTCTGCGGGAGATCTGACCTCAGACGCTCTTACTGATGTAGTGGTGGGCTCTAGAGGTGCAGTTACAGTAATAAGgTCTCAGCCTGTAATATGTTTGGCTATAAATGTCACCGTTGACCCACCAATCATCAGTCAGAAATTCTTTCATTGCTCTGTCCCGCTTGATCGCAACACACCTGTTGCCACAGTTACAATCTGTGTCACTGTAAAAGAAATTGCCAAGGGTGATATAAAAGGTAATTTTGGTTCTTTGGTGTCAGTGGCTTTGGAGCTGGAGCTAGACCCTTTGGCCAGAACTCCTCGGCTGTTATTTGGTTCCAAATCAGCTTCATTTCTCCTCACCCTCAATGGTAACCTGAGCAGCATTTCTCCTGTCTGCACTACTCTGTATATCAGCGTCCAGGAGTGTATTTCAGACTACCATGAAGTCCCTCTCACTGTGAAAATGAAAGTAACAACAGAAGTTATTCCAGGAACAGAAGGTCTGAGGCCAGTGCTGAGCCCTGACTGCTGCCCTGCATTTACAGAGATGGTGGTTCTGGAAAAAGTGTGTGGGGAAGATCATGTGTGTACATCAGATTTAAATGTGTCTCTGTCTTTTAAGAGGGATACTGTAGTAAGTGTTGCTGGTTACCCAGTGAATCTCTCAGTGGAGGTATTCAATAATGGAGAAGATTCCACAGATACAGAGCTTTTCCTTCATCATCCCACCATCCTCTCCTTTACCCGCATCAAAACGAATGATGTGCAGGTTTGGTGTGAGTCCAGTCACATAGAGCTCTCAAACATTACATGCACAGCATGCAAGCTTGGAACAACACTTTTCCGCCAGAAAGCAAAGACCACGCTGATGGTGTCATTCATGCTGTCTGCACCCTTTTCTGCGAATGAGCATCTGGTTGTCAATGCATCAGTCACAAGTAAGAATGAGAACAATGACACATCCCTAGATAATCATGCAACTACATCTGCGATGGTTAAACGTCCTGTTAATGTTGTGGTTAATAATGGAGGGTCAACTCGATTTGTTGAATATCCTAACTGTGCACAACTTGAGCATGTTTATACGgtGGAGAACTTTGGAAAATTCTCTGTGCCTGTAAATGTTACCTTTGTGATTCCAGTGAAGATGGCTTTAGGTTTCTCATGGAATGTATCTCTTCCTGAAATTAATGGAACCAGAACAGTTTGTGAAAAACAAGTTTCCTCTACAAATGGCAAAAGCCCCATTCTGACACATCATTGCAATGCTTCTACATGTCATCTTATTGTTTGCTCCATCCAGCTCTTTCCTGACCAACAAATCAGATTCAGGTTTAGTGGGAATATAAGTTCAGGCAACCAGGCATCTGGTTTGCAGGTTCGGATCACGAGCTGGGTGTTTCTCTCATTTGACACTGTTATGTACATTCAGTATCCTTCTGATGACTCTAATCAGCTCtctATTGTGACAGAGCTGGAGTACACGTCTCAGGCTCTCACAGTGCTTACCGCCTCACTCTCTGTCATTTTTGGACTCATTGCTATGACAATCATCTTTGTGCTGCTTTATAAAAGGGGATTTTTCAAAACTGCTTCAACTGATGACCAAGACAACTTAGTACTGCGTTCTGCTGGTGAAACTGGCTTGACTGCAGGAACCCCTGAGCTTTAACTCAACAAACTCCAAACTTAGCTCGGCTTTTCAGATTGATTTCACAGAATGTGCTTAACTTCACACCCCTGGActgtttagtttgttttcatttaccaTGTGCCATGTATGACTTAGTTTCTGTCTCTCATCTCATTATGGTCAGTCATTCATTATACTCATTAATTACCCTTTATAAAAGTTGTATCTATTCTATTCTTTGTTTGGTCTTATCTACACGGTGTGCATGATTTAGGCAAGTTGTACTTTTGAGGATTAACTTTGCTATTGTATAACTACAATGCTCTTGGtcaatccaaaataaaacaaaccctGAACATTTAAGTAGTAAAAGTGAGGTTTTGGCTTTTTTTAGAGAATATATACACCATTATTAGGCAACTATAATTGGGCAGAATTATTATGCAACTAAATGAAGAACAAAGTTTTTCCCATatcacttgtttatttttttacctgttaAAGTGAGAATAAAACTCAAAATTTACTAAAACTAATGAAACCTCAAGAAGAAAACCTCAGTGGCTAATATAGCCACCCTTCTTTTCGATAACAGTCACAAGCCTTTCATTCACGGAGTAAGTCAGTTTTTTGATCTGGTCAATATCAACTTTCAACTGTTCAGAGAGGTGTACTGTTTACCTTCACTGTAAATTTTCTGCTTAAGAAGGGCCCAAAAGTTCTCAATAGGGTTTAAGTCAGGTGAAGAATGGGGTTATGTCATTAGTTTTTTATCTTTAAGGCCTTTACTGGCCAGTCACGCAGTGGAGTACTTTGATGCATGTGATGTTGTTCTTGAAAGATGCAGTATTTTTCCTGTAGCACTGCTTGAAGAAAGTGTCTTCTAAAAATTGGCAGTAGGTCTGAGAGTTCCTTTTGAGTCCATTTTCAACCCGAAAGGTCCAACTatctaatttttaataatacctGCCCATACCAGTACCCCAGTCGAAGAGTCGAAGTGGAGCTCTGTGTCTATTACTGATCCAACCACAAGCCCATCAATCTGGTCCGTCAAGCTTCACTCTCATCTCATCAGTCTACAAAACCTTTGACAAATCTGTCTTCAGATATTTCTTAGCCCATTCTTGACGTTTCAACATATGCGTCTTGTTTAGAGGTGGTTGGGTTTCAGCCTTTCTTATCTTGGCCATGTCTCTGAAAACTAAACACTGTGTACTTCTTGACACTCCTGGTAGCTTCATGTTTGATTCTTCTCCAATATTTGGCAGTTAATTTGCGTCTTTTCTtcttgaaatgtttcttgcgAACCTGTTGACTATTTGCTACAAAACGTTTGAGGGTTCTGTGATCATGCCACAATATCTTAAACATTCCAAGAATGCTTGTCCTGTTAGTCagttaaatctctttttttggcCCATTTTTCATGTAGAGAAGAATctgcctaataattatgcacaccttGATATTGAGTGTTGATCTCCTTAGGCCATACCCTTCCTCcttacacaaatacacatcacCTGATATGTATTAAATCCACTAAGCATTCAAGTTTATACAGCTTGGAGTTGGAAATTCTGGGTAAAAAGATGATATGGTCAAAATAATCACTTGCCTAATAATTGTGCACACAGTGTATGCAGTATCTATGTAAGTGTGTGCTACTCTTCTGTGCAAGATTACCTCTGTGTGGATTATTAAAAGACTGTTTATTGTAAA
>XM_043240627.1
CAGTTATTCTATTCGACGACTCTGGCAGTATCAGCCCAAAAATTTTGAAACGATGATCCAATTTATCAAGAACttaattgtgatgtttttggacAAACGAGCACAGGTGGCAGTGGCTAAATTCTCCACAAGAGTTTCGGCAGTCTTTCACTTTGAGAACTTTGCCGTGAATAAAGACCCCGAACAACTAATGAAAGATGTGACCCAGGCACAGGGcgatacacacacaccttcgGCAATACGTTTTGTTATAGAACAGATGTTTTCTGAGAAGGTGGGCATGCGAAACAACTCTCAGAAGTTATTGCTGGTGATTACTGATGGAAAATCAAATGACCCCAAAGAAGACTTTAAGAATGTCATCCTGAAAGCCAATGAAAGGGACATCACACGATTTGCCATTGggGTTGGTAAGGAGTATTCTCATCCTGAGCTGGAGCTGATTGCTTCATCTCCTCAATTTGTTTTTGAGACAGAGAGTTTCAGTGCTCTCACCTTGATACTAAACCAGCTAAGAGAAAAAATATTCTCTATTGAAGgAACTGACACAGGGAACTTTAGCTCTTTTCAGATGGAATTATCACAAGGGGGTTTCAGTGTGGCCATTTCAGAGGGTTCAAAGATTTTTGGAGCGGTTGGGGCATACTCCTGGTCAGGAGGAATGGTGCAGGGTCTTACTGATCAAATGCTCAATTCATCATTCATTAATGCCACAAATATGGAGGAGGATATTGCAGATTCCTACTTGGGTTACTCAATTGCTGTGGCACCAGTAAATGGTCATGTTGTGTATTTTGCGGGAGCACCAAGGCATAGACACACAGGGCTGGTCCTGGGCTTTAGAGAGAACAAATGGAACCACAGTTGGACCATCATTCATAGGATATATGGATCACAGCTCGGCTCATATTTTGGGGCAGAATTATGTGTGATTGGAGTTTCTGAGTTTTTAGCAGTCGGGGCTCCATTATATCATGCTCATGGAGTGGGAGGAGAGGTCCGGATATACTCACTAAACACTACAATCCAAGAACTCAAATGCTCAACGATTTTGCGTGGGGTGATGGGCAATGAGTTTGGCCGGTTTGGTACTTCTTTGGCAAACATACAGGACCTGAATGGAGATGGCTTTAAAGAGTTGGCAGTGGGGGCACCTCAAGAAGAGAAGGGCAAGGGTgcaatttacatatttttgggGCAATCAGGTGGTATCAGACCAGAATACAGTCAGAGAATAAGTGGAGCAGCTGTAGGAAGTGGGCTGCAGTATTTCGGAGTTGCTCTCCACTCTGCGGGAGATCTGACCTCAGACGCTCTTACTGATGTAGTGGTGGGCTCTAGAGGTGCAGTTACAGTAATAAGgTCTCAGCCTGTAATATGTTTGGCTATAAATGTCACCGTTGACCCACCAATCATCAGTCAGAAATTCTTTCATTGCTCTGTCCCGCTTGATCGCAACACACCTGTTGCCACAGTTACAATCTGTGTCACTGTAAAAGAAATTGCCAAGGGTGATATAAAAGTGGCTTTGGAGCTGGAGCTAGACCCTTTGGCCAGAACTCCTCGGCTGTTATTTGGTTCCAAATCAGCTTCATTTCTCCTCACCCTCAATGGTAACCTGAGCAGCATTTCTCCTGTCTGCACTACTCTGTATATCAGCGTCCAGGAGTGTATTTCAGACTACCATGAAGTCCCTCTCACTGTGAAAATGAAAGTAACAACAGAAGTTATTCCAGGAACAGAAGGTCTGAGGCCAGTGCTGAGCCCTGACTGCTGCCCTGCATTTACAGAGATGGTGGTTCTGGAAAAAGTGTGTGGGGAAGATCATGTGTGTACATCAGATTTAAATGTGTCTCTGTCTTTTAAGAGGGATACTGTAGTAAGTGTTGCTGGTTACCCAGTGAATCTCTCAGTGGAGGTATTCAATAATGGAGAAGATTCCACAGATACAGAGCTTTTCCTTCATCATCCCACCATCCTCTCCTTTACCCGCATCAAAACGAATGATGTGCAGGTTTGGTGTGAGTCCAGTCACATAGAGCTCTCAAACATTACATGCACAGCATGCAAGCTTGGAACAACACTTTTCCGCCAGAAAGCAAAGACCACGCTGATGGTGTCATTCATGCTGTCTGCACCCTTTTCTGCGAATGAGCATCTGGTTGTCAATGCATCAGTCACAAGTAAGAATGAGAACAATGACACATCCCTAGATAATCATGCAACTACATCTGCGATGGTTAAACGTCCTGTTAATGTTGTGGTTAATAATGGAGGGTCAACTCGATTTGTTGAATATCCTAACTGTGCACAACTTGAGCATGTTTATACGgtGGAGAACTTTGGAAAATTCTCTGTGCCTGTAAATGTTACCTTTGTGATTCCAGTGAAGATGGCTTTAGGTTTCTCATGGAATGTATCTCTTCCTGAAATTAATGGAACCAGAACAGTTTGTGAAAAACAAGTTTCCTCTACAAATGGCAAAAGCCCCATTCTGACACATCATTGCAATGCTTCTACATGTCATCTTATTGTTTGCTCCATCCAGCTCTTTCCTGACCAACAAATCAGATTCAGGTTTAGTGGGAATATAAGTTCAGGCAACCAGGCATCTGGTTTGCAGGTTCGGATCACGAGCTGGGTGTTTCTCTCATTTGACACTGTTATGTACATTCAGTATCCTTCTGATGACTCTAATCAGCTCtctATTGTGACAGAGCTGGAGTACACGTCTCAGGCTCTCACAGTGCTTACCGCCTCACTCTCTGTCATTTTTGGACTCATTGCTATGACAATCATCTTTGTGCTGCTTTATAAAAGGGGATTTTTCAAAACTGCTTCAACTGATGACCAAGACAACTTAGTACTGCGTTCTGCTGGTGAAACTGGCTTGACTGCAGGAACCCCTGAGCTTTAACTCAACAAACTCCAAACTTAGCTCGGCTTTTCAGATTGATTTCACAGAATGTGCTTAACTTCACACCCCTGGActgtttagtttgttttcatttaccaTGTGCCATGTATGACTTAGTTTCTGTCTCTCATCTCATTATGGTCAGTCATTCATTATACTCATTAATTACCCTTTATAAAAGTTGTATCTATTCTATTCTTTGTTTGGTCTTATCTACACGGTGTGCATGATTTAGGCAAGTTGTACTTTTGAGGATTAACTTTGCTATTGTATAACTACAATGCTCTTGGtcaatccaaaataaaacaaaccctGAACATTTAAGTAGTAAAAGTGAGGTTTTGGCTTTTTTTAGAGAATATATACACCATTATTAGGCAACTATAATTGGGCAGAATTATTATGCAACTAAATGAAGAACAAAGTTTTTCCCATatcacttgtttatttttttacctgttaAAGTGAGAATAAAACTCAAAATTTACTAAAACTAATGAAACCTCAAGAAGAAAACCTCAGTGGCTAATATAGCCACCCTTCTTTTCGATAACAGTCACAAGCCTTTCATTCACGGAGTAAGTCAGTTTTTTGATCTGGTCAATATCAACTTTCAACTGTTCAGAGAGGTGTACTGTTTACCTTCACTGTAAATTTTCTGCTTAAGAAGGGCCCAAAAGTTCTCAATAGGGTTTAAGTCAGGTGAAGAATGGGGTTATGTCATTAGTTTTTTATCTTTAAGGCCTTTACTGGCCAGTCACGCAGTGGAGTACTTTGATGCATGTGATGTTGTTCTTGAAAGATGCAGTATTTTTCCTGTAGCACTGCTTGAAGAAAGTGTCTTCTAAAAATTGGCAGTAGGTCTGAGAGTTCCTTTTGAGTCCATTTTCAACCCGAAAGGTCCAACTatctaatttttaataatacctGCCCATACCAGTACCCCAGTCGAAGAGTCGAAGTGGAGCTCTGTGTCTATTACTGATCCAACCACAAGCCCATCAATCTGGTCCGTCAAGCTTCACTCTCATCTCATCAGTCTACAAAACCTTTGACAAATCTGTCTTCAGATATTTCTTAGCCCATTCTTGACGTTTCAACATATGCGTCTTGTTTAGAGGTGGTTGGGTTTCAGCCTTTCTTATCTTGGCCATGTCTCTGAAAACTAAACACTGTGTACTTCTTGACACTCCTGGTAGCTTCATGTTTGATTCTTCTCCAATATTTGGCAGTTAATTTGCGTCTTTTCTtcttgaaatgtttcttgcgAACCTGTTGACTATTTGCTACAAAACGTTTGAGGGTTCTGTGATCATGCCACAATATCTTAAACATTCCAAGAATGCTTGTCCTGTTAGTCagttaaatctctttttttggcCCATTTTTCATGTAGAGAAGAATctgcctaataattatgcacaccttGATATTGAGTGTTGATCTCCTTAGGCCATACCCTTCCTCcttacacaaatacacatcacCTGATATGTATTAAATCCACTAAGCATTCAAGTTTATACAGCTTGGAGTTGGAAATTCTGGGTAAAAAGATGATATGGTCAAAATAATCACTTGCCTAATAATTGTGCACACAGTGTATGCAGTATCTATGTAAGTGTGTGCTACTCTTCTGTGCAAGATTACCTCTGTGTGGATTATTAAAAGACTGTTTATTGTAAA

Function

NR:

description
PREDICTED: integrin alpha-X-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240626.1 True 4627 mRNA 0.41 26 24814609 24903289
XM_043240627.1 False 4603 mRNA 0.41 26 24814609 24903289

Neighbor

gene id symbol gene type direction distance location
taf6 taf6,LOC103372846 coding downstream 31961 24759478 ~ 24782648 (-)
sat2b sat2,sat2b,LOC107596022 coding downstream 63327 24749282 ~ 24751282 (-)
LOC122345804 LOC107730346,LOC107595984,LOC107684368 coding downstream 90700 24714443 ~ 24723909 (-)
rangrf rangrf coding downstream 124419 24685346 ~ 24690190 (-)
bspry bspry,LOC107746480,LOC107575043,LOC107730316,LOC107684387,LOC107596025 coding downstream 153009 24656827 ~ 24661600 (-)
zfpl1 zfpl1 coding upstream 327946 25231235 ~ 25263128 (-)
LOC122345796 pak3,LOC107566210,LOC107712492,LOC103475835,LOC103141826,LOC108245238,LOC107093501 coding upstream 400186 25303475 ~ 25446662 (-)
LOC122345798 dcx coding upstream 567363 25470652 ~ 25523837 (-)
hip1rb hip1r,hip1rb,LOC107571022 coding upstream 714822 25618111 ~ 25651008 (-)
kntc1 kntc1 coding upstream 752218 25655507 ~ 25708679 (-)
G39347 NA non-coding downstream 61287 24753082 ~ 24753322 (-)
G39341 NA non-coding downstream 82534 24731639 ~ 24732075 (-)
G39337 NA non-coding downstream 84218 24730212 ~ 24730391 (-)
LOC122345299 NA non-coding downstream 189731 24623559 ~ 24624878 (-)
G39298 LOC107683704,LOC107738921,LOC107600589,LOC107595993,LOC107730350 non-coding downstream 292588 24521562 ~ 24522021 (-)
G39365 NA non-coding upstream 9357 24912646 ~ 24912939 (-)
trnan-guu_1 NA non-coding upstream 14531 24917820 ~ 24917893 (-)
trnak-cuu_4 NA non-coding upstream 14716 24918005 ~ 24918076 (-)
trnak-cuu_5 NA non-coding upstream 20859 24924148 ~ 24924220 (-)
G39366 NA non-coding upstream 21418 24924707 ~ 24924947 (-)
LOC122345923 NA other downstream 55941 24754202 ~ 24758668 (-)
naa38 naa38 other downstream 65999 24746672 ~ 24748610 (-)
anapc2 anapc2,LOC107559737,LOC107730340,LOC107746468,LOC107683706,LOC107595991,LOC107684355 other downstream 220493 24587724 ~ 24594116 (-)
tmc2a tmc2a,tmc1,LOC107684381,LOC107596032,LOC108437175,LOC107730318,LOC108259782 other downstream 537305 24265464 ~ 24277304 (-)
G39113 NA other downstream 614113 24197705 ~ 24200496 (-)
G39413 LOC102215562 other upstream 378597 25281886 ~ 25282286 (-)
LOC122344921 NA other upstream 658685 25561974 ~ 25568686 (-)
LOC122345426 smpx,LOC107705278,LOC107671350,LOC107590224,LOC107663668,LOC107586736,LOC107721880 other upstream 2196526 27099815 ~ 27107385 (-)
isca1 isca1,LOC107702919,LOC107662049 other upstream 2479632 27382921 ~ 27398741 (-)
LOC122344874 NA other upstream 2982752 27886041 ~ 27895454 (-)

Expression


Co-expression Network