msh3 (msh3,LOC107720281)


Basic Information

Item Value
gene id msh3
gene name msh3,LOC107720281
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 18962322 ~ 19014100 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240647.1
CTCACCCTCCGCGGTACAGCGGAGTTCGCGTGCGCGGGACGCTGGATACGTCACTCACGCGCCAGCATGATCCTAGTCTCTTTTTTTAGAGACTACTTTTAATCATCAGAGTTTTGGCCTGTTTTCTTAAAACAAGGCAACACGTTAATAAGCGgttaatgctgtaaaatgaatgCAAGTGTCAAAAATGTCAGCGCATCCAAATCCTCAAAGAAGTCCAGCACACAGACAACCATCAGCAGATTCTTTACAAGTGCAAACGATAAATCTCAACTGACTGACCAGCCTGGGATTAAACGCCAGGACGGACGCCATGAGGGCAGAGGAAAGAAGAGGTTGTCTGATGGAGGAACGTCCTCAGAGAAACGGCCCAAACTCTCTCACAGTGTGGAGGAGGAGTGCATGGCGACCCCCAGCTCCTATAAGATGGTATCCTCTAGAGCCAGCGTCAGCCGTGCCACCCTGGCGAGGCTAAAAGATTTCAGCTGCCCCGGGAGCTCAGACAGCCAAGCCTCCGATCGGCTTGTAAAGATGGACGTGGAGCATTCTTCCCCACGACAACACAATGCAATGCGTTCCTACAATCAGCTGGAGGAAGAGGTCAAAGAAGAGCCTATTAAGATTAAACAGgaGGTTTCCTTCAGTCAGCCTGCTAAGAATGCTGTGATCAAAAAGAGTTCAGAAGAGCCTGGTGTTCCCAACAGGAGAACCAAGACTATATACACTCCTCTAGAGGAGCAGTACATGGAGATCAAAAAGCATCAAGCAGACACAGTGCTTTGTGTTGAGTGTGGCTACAAGTACAGGTTCTTCGGCGAGGATGCAGAGaTCGCTGCAAAGGAGCTCAACATCACTTGTCATCTGGACCATAACTTCATGACGGCCAGCATCCCTACTCATCGCCTGTTTGTTCACGTTCGGCGACTGGTCTCTCAGGGCTACAAGGTAGGTGTGGTCAAGCAGACCGAAACCACAGCCATCAAGGCCTCCGGCACCAACAAGAGTTCTCTGTTCACACGGCAACTACATGCACTTTACACCAAATCCACGCTTGTGGGAGAAGATGTCAATCCTCTGCTCAAGCTGGGAGATTTGGAGCAAGCTGAAGATGTGGTGCAGGACAGTGGTAACAACTATTTgatgtgtgtgagcgagagttTTGATAAACAGAGCAAGGAGCTGACTGTAGGGTTGGTGGTGGTCCAGCCGAGCATTGGGGACCTGATGGTGGATTGTTTTAAAGATAACGCTTCCCATTCAGAGCTGGAATCCAGGGTACTAAAAATACAACCTGTAGAGATCCTGGTGCCTTCCAACATTTCAGAGGTGACTGAGAGGTTATTACGCAACATCGCTCTGTCCAgTGTTCAAGCTGATGACCGGATTCGCCTTGAGAAACGAGAAAGCTCCATGTTTGAATACCCAGCCGCGATGGGAATTATCAAAGATTTCTACAGGGACACCCCTCATTCAGCTGGGGGAAACCAAGAAAAGGGTTCCTACTCCCTCTGTATGAGTCTGGAGAGCCCCATCATCTGCTGTCTTGGTCCTGTGATCCAGTATCTGACTGAGTTTAAGCTAGCAAAGATTTTACTATGTTCCAGCTCGTTCAAGCGGCTGTCGAGTGACGCAGACCACATGCAGCTCAATGCGGCTACCGTGAAGAATCTGGAGATCCTGTGCAACCAGACCACAGGTTCAGTAAAAGGTAGTCTGCTGTGGGTTCTGGATCACACTCAGACTCCATTTGGGAAGAGACTGTTAAGAAAGTGGGTGAGCCAGCCGCTGAAGTCTGTGATTGATATCCAGGCTCGGCAGGAGGCAGTAGCAGAAATTTTGTGTTCTGAGTCCAGTGTCCTTCCCTCACTCCAGTCTCTGCTAACTCGTCTACCCGACCTCGAGAGGGGACTTTGCAGTATCTACCACAAAAAATGCTCTACTCAGGAATTTTACCTCATCTCCAGCACTCTCTCTCGCCTGAGTGCTGAGCTTCAAGCCCTCATGCCTGCCATCCAATCACAGCTCAGCTGTGCTCTTCTAAAAAACCTCCTACAGGACATACCTCAGCTTTTAAGCCCCGCCTACAACTTCTTAAAAGTACTGGATGAGAAAGCTGCAAAGACAGGTAATAAGACAGAGATGTTTGTGGATCTGACTGACTTCCCAGTGATCCAAAACAGAAAAGAGGAAATCCAGAGTGTCCTATCAGACATAATGGAGCATCAGCGAGAGGTTCGCCTTGTGTTAAAAAACCCTTCTTTGGACTACACCACAGTGTCTGGCCAGCAGtttctCATTGAAGTAAAGAACAATATGTCATCTATAGTCCCAGCAGACTGGGTCAAAATCAACAGCACTAAGGTTGTGGGCCGCTATCACACCCCATTCATTGTAGAGAAACATCGGCGTCTGCAGCAACTACGAGAGCAGCTGGTTATTGACTGTAATCACGAGTGGATCAACTTCCTTCAGCTATTTGGGGACCATTACTACATCCTGAGGAAAGCAGTGTGTCACCTAGCAACCATGGACTGCCTCTTCTCATTGGCTCAGGTtgctaaagaaaataattactgCAGGCCAGAGGTTCATGAAGATAAAAGTCAGATTTTGATCACAGCAGGCAAGCATCCGGTCATTACCTCGTTGATGGGAGATGAGGATCAATATGTCCCCAATGACACTCACTTACAGGGGGATGGCAAGCGAGCCATGATCATCACTGGGCCCAACATGGGTGGCAAGAGCTCTTACATCCGACAGGTTGCTCTGGTGACAATCATGGCACAGCTGGGATCCTTTGTTCCTGCCAGAGCGGCTTCAGTGGGCATTGTAGATGGCATATATGTCAGAATGGGAGCATCTGACAACATCTCAAGGGGAAGAAGCACCTTTATGGAGGAGCTTGTCGAAGCATCTGATATTTTGGCTCGTGCCACCTCCCGTTCCCTGGTCATCCTGGATGAGCTCGGTCGAGGCACCAGCACTCACGACGGCATCGCCATCGCTTATGCTACCCTAGAGTCCTTCATCAGAGATGTGAAGTGTACGACGTTGTTTGTGACCCACTACCCTCCATTGTGTGAGCTGGAGCACTTGTATCCGCAGCATGTGGGGAACTACCACATGGCTTTCCTGCTGAATGAGCCAGAGAGCACTTCTGATGAGGAGGAGGTGCAGCCAGAGTTCATCACATTTCTCTATCAGCTGATTGAAGGAGCAGCCGCCAGGAGCTATGGGCTAAATGTAGCACGTCTGGCTGAAATCCCAGAGTCCATCCTCAGGACCGCTGCATTCAAATCTAAAGAGTTGGAGGCTCTCGTGAACAGCCGGAGgAAAATGGTGAGACTGTTATCTGATGCCTGGAGTATCCCCAACAAGGAAGCACTGCTGGATTGGAGAAAGTGTAATCTCTAATAATAGCGTGAGGGTTTTTGCCCATAGGATAAAACAAAGAGGAACTGAATGTCATGTATTTGACTACATACTGTATTTCATCACCCATTTTaacatgaactcaaaacaaTAGATCTTACAACTATGTCTTATCTCCGGGTGCTTTGGTCAGAATGTATGCTGGCAACATGCTCTATTTGTGTCcatgagaaaaaagaaaataatgcacCTTTCTAAAATTGTTGGTGTAATGTTGTATGTgcattaaactgtaaattacaaattttactgtaaattctggttttcttttcattagttcacccataaatgaaaatcctgtcatcgtttactcggTTGTTGATCGGTAACCTCcagtaataaagtaataaagatTTGGAACAGTAA
>XM_043240648.1
CTCTCACCCTCCGCGGTACAGCGGAGTTCGCGTGCGCGGGACGCTGGATACGTCACTCACGCGCCAGCATGATCCTAGTCTCTTTTTTTAGAGACTACTTTTAATCATCAGAGTTTTGGCCTGTTTTCTTAAAACAAGGCAACACGTTAATAAGCGgttaatgctgtaaaatgaatgCAAGTGTCAAAAATGTCAGCGCATCCAAATCCTCAAAGAAGTCCAGCACACAGACAACCATCAGCAGATTCTTTACAAGTGCAAACGATAAATCTCAACTGACTGACCAGCCTGGGATTAAACGCCAGGACGGACGCCATGAGGGCAGAGGAAAGAAGAGGTTGTCTGATGGAGGAACGTCCTCAGAGAAACGGCCCAAACTCTCTCACAGTGTGGAGGAGGAGTGCATGGCGACCCCCAGCTCCTATAAGATGGTATCCTCTAGAGCCAGCGTCAGCCGTGCCACCCTGGCGAGGCTAAAAGATTTCAGCTGCCCCGGGAGCTCAGACAGCCAAGCCTCCGATCGGCTTGTAAAGATGGACGTGGAGCATTCTTCCCCACGACAACACAATGCAATGCGTTCCTACAATCAGCTGGAGGAAGAGGTCAAAGAAGAGCCTATTAAGATTAAACAGgaGGTTTCCTTCAGTCAGCCTGCTAAGAATGCTGTGATCAAAAAGAGTTCAGAAGAGCCTGGTGTTCCCAACAGGAGAACCAAGACTATATACACTCCTCTAGAGGAGCAGTACATGGAGATCAAAAAGCATCAAGCAGACACAGTGCTTTGTGTTGAGTGTGGCTACAAGTACAGGTTCTTCGGCGAGGATGCAGAGaTCGCTGCAAAGGAGCTCAACATCACTTGTCATCTGGACCATAACTTCATGACGGCCAGCATCCCTACTCATCGCCTGTTTGTTCACGTTCGGCGACTGGTCTCTCAGGGCTACAAGGTAGGTGTGGTCAAGCAGACCGAAACCACAGCCATCAAGGCCTCCGGCACCAACAAGAGTTCTCTGTTCACACGGCAACTACATGCACTTTACACCAAATCCACGCTTGTGGGAGAAGATGTCAATCCTCTGCTCAAGCTGGGAGATTTGGAGCAAGCTGAAGATGTGGTGCAGGACAGTGGTAACAACTATTTgatgtgtgtgagcgagagttTTGATAAACAGAGCAAGGAGCTGACTGTAGGGTTGGTGGTGGTCCAGCCGAGCATTGGGGACCTGATGGTGGATTGTTTTAAAGATAACGCTTCCCATTCAGAGCTGGAATCCAGGGTACTAAAAATACAACCTGTAGAGATCCTGGTGCCTTCCAACATTTCAGAGGTGACTGAGAGGTTATTACGCAACATCGCTCTGTCCAgTGTTCAAGCTGATGACCGGATTCGCCTTGAGAAACGAGAAAGCTCCATGTTTGAATACCCAGCCGCGATGGGAATTATCAAAGATTTCTACAGGGACACCCCTCATTCAGCTGGGGGAAACCAAGAAAAGGGTTCCTACTCCCTCTGTATGAGTCTGGAGAGCCCCATCATCTGCTGTCTTGGTCCTGTGATCCAGTATCTGACTGAGTTTAAGCTAGCAAAGATTTTACTATGTTCCAGCTCGTTCAAGCGGCTGTCGAGTGACGCAGACCACATGCAGCTCAATGCGGCTACCGTGAAGAATCTGGAGATCCTGTGCAACCAGACCACAGGTTCAGTAAAAGGTAGTCTGCTGTGGGTTCTGGATCACACTCAGACTCCATTTGGGAAGAGACTGTTAAGAAAGTGGGTGAGCCAGCCGCTGAAGTCTGTGATTGATATCCAGGCTCGGCAGGAGGCAGTAGCAGAAATTTTGTGTTCTGAGTCCAGTGTCCTTCCCTCACTCCAGTCTCTGCTAACTCGTCTACCCGACCTCGAGAGGGGACTTTGCAGTATCTACCACAAAAAATGCTCTACTCAGGAATTTTACCTCATCTCCAGCACTCTCTCTCGCCTGAGTGCTGAGCTTCAAGCCCTCATGCCTGCCATCCAATCACAGCTCAGCTGTGCTCTTCTAAAAAACCTCCTACAGGACATACCTCAGCTTTTAAGCCCCGCCTACAACTTCTTAAAAGTACTGGATGAGAAAGCTGCAAAGACAGGTAATAAGACAGAGATGTTTGTGGATCTGACTGACTTCCCAGTGATCCAAAACAGAAAAGAGGAAATCCAGAGTGTCCTATCAGACATAATGGAGCATCAGCGAGAGGTTCGCCTTGTGTTAAAAAACCCTTCTTTGGACTACACCACAGTGTCTGGCCAGCAGtttctCATTGAAGTAAAGAACAATATGTCATCTATAGTCCCAGCAGACTGGGTCAAAATCAACAGCACTAAGGTTGTGGGCCGCTATCACACCCCATTCATTGTAGAGAAACATCGGCGTCTGCAGCAACTACGAGAGCAGCTGGTTATTGACTGTAATCACGAGTGGATCAACTTCCTTCAGCTATTTGGGGACCATTACTACATCCTGAGGAAAGCAGTGTGTCACCTAGCAACCATGGACTGCCTCTTCTCATTGGCTCAGGTtgctaaagaaaataattactgCAGGCCAGAGGTTCATGAAGATAAAAGTCAGATTTTGATCACAGCAGGCAAGCATCCGGTCATTACCTCGTTGATGGGAGATGAGGATCAATATGTCCCCAATGACACTCACTTACAGGGGGATGGCAAGCGAGCCATGATCATCACTGGGCCCAACATGGGTGGCAAGAGCTCTTACATCCGACAGGTTGCTCTGGTGACAATCATGGCACAGCTGGGATCCTTTGTTCCTGCCAGAGCGGCTTCAGTGGGCATTGTAGATGGCATATATGTCAGCCCAAAATTGCTGTTATGGCAGCCAGACTGATTCACTGCAGAAACGTCTGACGGGATCTTTATGGATTGTACATCATCAATTGCACGAGCGCTGTTTTATCACGAATAACGAGTTCAAatgattttatacaatttaGAAAGTAAGCCCAGTTAATGTtatgttaaattttaaacacaatattgtCCGTTTTGCTGAGAAAATATTTCCTTTAAAGCCACATCAGAATTGTTCAATTactgaatgaatctgcattttgaaCGAATCCAGTGATTCAATAGCCTGTTCATAAACTGAGCTACTTGattcctgaatgaatgaatgaatgaatgatgatataaagacatttattaccACCTGTTGACAGTGTTTATTTAGAGtatcatttcaataaaaactaaatctgaaaAAGATGACTGTTAATAACTATGCtagtaaaacacatttgataTAAACAGTATGATTGCCATTAATGCAATTCTTAAGGTTATGACCTGTCAACCTTTTAAAACGACTCGTacaaacacgcccccacttttctacatcacagagtggggTAATTTTCTTACACCACccaaatatttatgcaaagaaagaaggtggCGCAGTTATTCTGGCTGTAGTGTTGTTAAGGGTGCCATTTTCAGGAGActgtgtattattgtgaaagtgaaactactttgtctctgcttccaaaagaggactaGAAATCAGTGGCTAAGTTGTATTTACAAGAACAGTTCATATTAGAGTGTGTTAAGCACATTTACAGAGAACTATTTTCTTGGAGCAGTCTATGCTAACTGCGCTATAAAGTTGAGAAATTCTagctctgcaaggacagtcagGTGCTTCTGACTCAAAACCTTTAACTAAGttgcattttcttattaaaagaacctgctacttactattcaaatgcaagttttgagcagtgaagagTAACATtagtgcttgttgttttgttgtttgtcgtTTCTCGATTACAAACGGGACACATTAAAGCACAGGACTAAGTCATGATAGTCAgttatgtccccactggattTAACAAATGTcttgtttgtaatgtgttttattgtttttgtcatagGACTGGGACATGGCATCTTGTTATGGTAAGGAGAGTAACATTTCCAGCAGATGCTTGAGGTATTCTGGCAATCACAGTGcgctggatagctggccaatcaaagcacacctcgctttttttttttttagaacgatgagctttgtacaaattgaCCAGAAAGAAACAGATTTTTTCAGAAAACGGGGCTTATAGGAGAAACAATTATGTTCAATATGTggaaaatcatttgttttttgcaccttaaaccacataaacgcattgcattacaccgaatgctaaaaagaacattattttgtgtaacatcaaatgacccctttaaaatggaaatgtggTCGTGCAGCTTCCTGGGAGAAATCTGCTGAcagaaacatgaaaatgaaatgccTGTAGTCAAACTGTTCGGAGGttaaaatacaagaaaacatttagaGACAAAAGCAACAAATAGAATGAAAGTGGCAGTTTGTTAATGTGTTTCACAGCAAAGCTACATATACCATCTGTGTTCCCTCTCGAGCCCGGCCAATAGCTGCACTATTAGTCCAGCTAAAGCTTGTCTGTggcattttattcaatttaaaagtaGGATGAAGCCCCTTACCAGGATAATGGGAATGATTTTCAGATTAGCTGGTAACAAAGAATAATTCTGTGTTGTGGGGATTATGTACATGACCTGTAATGGCCAGCACATTATTTGGCTCATATCTTGCTTAATGCTATTGCAATTGGTCTGAATTAGGGAGactttacattttgcttttctGCTAACCAtcggaaaaagaaaaaagagaactCCTGCagtacaaatataccccagagGTTTGTTCACTTCTACATCATGATTGTTCAACAACGTCTGCTTTTTCCTGCACTCTCAGCAACTTATGAAATAATGAGGTGCTGTGTTTGCCTAAGCCATTCGATATTTGTGTGGTGTTCATATTTGATGGTAGTGACCTTTTATAGCTTTGAAAATGTTATCAGCAGCcaaatcagttttttattttacttaaacacTGCATAGTCACACCAGTAATGCATTTTACGAGTATTTGTAGGTCCCTTTCCTCTGCCTTTCATGGTTAAGAATTGGTTTTATCATTCTTAATTGTGACTCAAGTCTTTGTAATGAGCCTAAATACTGTCACTGAAGAACCTTTATAACTCTACAGTTACAAATGCTGTTTGTAACTTAAAACCCTAATGGTTTGATCAGAGTTAAAAATCTGTCATCCACTTGCTCTCATGTCATTGTAAACCTATAtggctttattttgtgtttataacaCTAAGGGCAGAATATTCTGGACTTttagtataataaaatgcaactaaaatTGTCAAAATTGAGCATTGTCCACACATAGTTCTTGATTTATATGGATGACTCTGATGACACTTTTCTGgtgctttttatctttttttgaagtttaaagGCCCATCCGTTGTAATTGTATTGATATGATTAACTGCCATATATAAGTTACttgtttgtgttccacagaagaagaaaagtCTTACAACGTGAGagtgatgcattttaattttttaccaaCATAAtgcttgtttaattaaatttttggt
>XR_006251073.1
CTCTCACCCTCCGCGGTACAGCGGAGTTCGCGTGCGCGGGACGCTGGATACGTCACTCACGCGCCAGCATGATCCTAGTCTCTTTTTTTAGAGACTACTTTTAATCATCAGAGTTTTGGCCTGTTTTCTTAAAACAAGGCAACACGTTAATAAGCGgttaatgctgtaaaatgaatgCAAGTGTCAAAAATGTCAGCGCATCCAAATCCTCAAAGAAGTCCAGCACACAGACAACCATCAGCAGATTCTTTACAAGTGCAAACGATAAATCTCAACTGACTGACCAGCCTGGGATTAAACGCCAGGACGGACGCCATGAGGGCAGAGGAAAGAAGAGGTTGTCTGATGGAGGAACGTCCTCAGAGAAACGGCCCAAACTCTCTCACAGTGTGGAGGAGGAGTGCATGGCGACCCCCAGCTCCTATAAGATGGTATCCTCTAGAGCCAGCGTCAGCCGTGCCACCCTGGCGAGGCTAAAAGATTTCAGCTGCCCCGGGAGCTCAGACAGCCAAGCCTCCGATCGGCTTGTAAAGATGGACGTGGAGCATTCTTCCCCACGACAACACAATGCAATGCGTTCCTACAATCAGCTGGAGGAAGAGGTCAAAGAAGAGCCTATTAAGATTAAACAGgaGGTTTCCTTCAGTCAGCCTGCTAAGAATGCTGTGATCAAAAAGAGTTCAGAAGAGCCTGGTGTTCCCAACAGGAGAACCAAGACTATATACACTCCTCTAGAGGAGCAGTACATGGAGATCAAAAAGCATCAAGCAGACACAGTGCTTTGTGTTGAGTGTGGCTACAAGTACAGGTTCTTCGGCGAGGATGCAGAGaTCGCTGCAAAGGAGCTCAACATCACTTGTCATCTGGACCATAACTTCATGACGGCCAGCATCCCTACTCATCGCCTGTTTGTTCACGTTCGGCGACTGGTCTCTCAGGGCTACAAGGTAGGTGTGGTCAAGCAGACCGAAACCACAGCCATCAAGGCCTCCGGCACCAACAAGAGTTCTCTGTTCACACGGCAACTACATGCACTTTACACCAAATCCACGCTTGTGGGAGAAGATGTCAATCCTCTGCTCAAGCTGGGAGATTTGGAGCAAGCTGAAGATGTGGTGCAGGACAGTGGTAACAACTATTTgatgtgtgtgagcgagagttTTGATAAACAGAGCAAGGAGCTGACTGTAGGGTTGGTGGTGGTCCAGCCGAGCATTGGGGACCTGATGGTGGATTGTTTTAAAGATAACGCTTCCCATTCAGAGCTGGAATCCAGGGTACTAAAAATACAACCTGTAGAGATCCTGGTGCCTTCCAACATTTCAGAGGTGACTGAGAGGTTATTACGCAACATCGCTCTGTCCAgTGTTCAAGCTGATGACCGGATTCGCCTTGAGAAACGAGAAAGCTCCATGTTTGAATACCCAGCCGCGATGGGAATTATCAAAGATTTCTACAGGGACACCCCTCATTCAGCTGGGGGAAACCAAGAAAAGGGTTCCTACTCCCTCTGTATGAGTCTGGAGAGCCCCATCATCTGCTGTCTTGGTCCTGTGATCCAGTATCTGACTGAGTTTAAGCTAGCAAAGATTTTACTATGTTCCAGCTCGTTCAAGCGGCTGTCGAGTGACGCAGACCACATGCAGCTCAATGCGGCTACCGTGAAGAATCTGGAGATCCTGTGCAACCAGACCACAGGTTCAGTAAAAGGTAGTCTGCTGTGGGTTCTGGATCACACTCAGACTCCATTTGGGAAGAGACTGTTAAGAAAGTGGGTGAGCCAGCCGCTGAAGTCTGTGATTGATATCCAGGCTCGGCAGGAGGCAGTAGCAGAAATTTTGTGTTCTGAGTCCAGTGTCCTTCCCTCACTCCAGTCTCTGCTAACTCGTCTACCCGACCTCGAGAGGGGACTTTGCAGTATCTACCACAAAAAATGCTCTACTCAGGAATTTTACCTCATCTCCAGCACTCTCTCTCGCCTGAGTGCTGAGCTTCAAGCCCTCATGCCTGCCATCCAATCACAGCTCAGCTGTGCTCTTCTAAAAAACCTCCTACAGGACATACCTCAGCTTTTAAGCCCCGCCTACAACTTCTTAAAAGTACTGGATGAGAAAGCTGCAAAGACAGGTAATAAGACAGAGATGTTTGTGGATCTGACTGACTTCCCAGTGATCCAAAACAGAAAAGAGGAAATCCAGAGTGTCCTATCAGACATAATGGAGCATCAGCGAGAGGTTCGCCTTGTGTTAAAAAACCCTTCTTTGGACTACACCACAGTGTCTGGCCAGCAGtttctCATTGAAGTAAAGAACAATATGTCATCTATAGTCCCAGCAGACTGGGTCAAAATCAACAGCACTAAGGTTGTGGGCCGCTATCACACCCCATTCATTGTAGAGAAACATCGGCGTCTGCAGCAACTACGAGAGCAGCTGGTTATTGACTGTAATCACGAGTGGATCAACTTCCTTCAGCTATTTGGGGACCATTACTACATCCTGAGGAAAGCAGTGTGTCACCTAGCAACCATGGACTGCCTCTTCTCATTGGCTCAGGTtgctaaagaaaataattactgCAGGCCAGAGGTTCATGAAGATAAAAGTCAGATTTTGATCACAGCAGGCAAGCATCCGGTCATTACCTCGTTGATGGGAGATGAGGATCAATATGTCCCCAATGACACTCACTTACAGGGGGATGGCAAGCGAGCCATGATCATCACTGGGCCCAACATGGGTGGCAAGAGCTCTTACATCCGACAGGTTGCTCTGGTGACAATCATGGCACAGCTGGGATCCTTTGTTCCTGCCAGAGCGGCTTCAGTGGGCATTGTAGATGGCATATATGTCAGCCCAAAATTGCTGTTATGGCAGCCAGACTGATTCACTGCAGAAACGTCTGACGGGATCTTTATGGATTGTACATCATCAATTGCACGAGCGCTGTTTTATCACGAATAACGAGTTCAAatgattttatacaatttaGAAAGACTGGGACATGGCATCTTGTTATGGTAAGGAGAGTAACATTTCCAGCAGATGCTTGAGGTATTCTGGCAATCACAGTGcgctggatagctggccaatcaaagcacacctcgctttttttttttttagaacgatgagctttgtacaaattgaCCAGAAAGAAACAGATTTTTTCAGAAAACGGGGCTTATAGGAGAAACAATTATGTTCAATATGTggaaaatcatttgttttttgcaccttaaaccacataaacgcattgcattacaccgaatgctaaaaagaacattattttgtgtaacatcaaatgacccctttaaaatggaaatgtggTCGTGCAGCTTCCTGGGAGAAATCTGCTGAcagaaacatgaaaatgaaatgccTGTAGTCAAACTGTTCGGAGGttaaaatacaagaaaacatttagaGACAAAAGCAACAAATAGAATGAAAGTGGCAGTTTGTTAATGTGTTTCACAGCAAAGCTACATATACCATCTGTGTTCCCTCTCGAGCCCGGCCAATAGCTGCACTATTAGTCCAGCTAAAGCTTGTCTGTggcattttattcaatttaaaagtaGGATGAAGCCCCTTACCAGGATAATGGGAATGATTTTCAGATTAGCTGGTAACAAAGAATAATTCTGTGTTGTGGGGATTATGTACATGACCTGTAATGGCCAGCACATTATTTGGCTCATATCTTGCTTAATGCTATTGCAATTGGTCTGAATTAGGGAGactttacattttgcttttctGCTAACCAtcggaaaaagaaaaaagagaactCCTGCagtacaaatataccccagagGTTTGTTCACTTCTACATCATGATTGTTCAACAACGTCTGCTTTTTCCTGCACTCTCAGCAACTTATGAAATAATGAGGTGCTGTGTTTGCCTAAGCCATTCGATATTTGTGTGGTGTTCATATTTGATGGTAGTGACCTTTTATAGCTTTGAAAATGTTATCAGCAGCcaaatcagttttttattttacttaaacacTGCATAGTCACACCAGTAATGCATTTTACGAGTATTTGTAGGTCCCTTTCCTCTGCCTTTCATGGTTAAGAATTGGTTTTATCATTCTTAATTGTGACTCAAGTCTTTGTAATGAGCCTAAATACTGTCACTGAAGAACCTTTATAACTCTACAGTTACAAATGCTGTTTGTAACTTAAAACCCTAATGGTTTGATCAGAGTTAAAAATCTGTCATCCACTTGCTCTCATGTCATTGTAAACCTATAtggctttattttgtgtttataacaCTAAGGGCAGAATATTCTGGACTTttagtataataaaatgcaactaaaatTGTCAAAATTGAGCATTGTCCACACATAGTTCTTGATTTATATGGATGACTCTGATGACACTTTTCTGgtgctttttatctttttttgaagtttaaagGCCCATCCGTTGTAATTGTATTGATATGATTAACTGCCATATATAAGTTACttgtttgtgttccacagaagaagaaaagtCTTACAACGTGAGagtgatgcattttaattttttaccaaCATAAtgcttgtttaattaaatttttggt

Function

symbol description
msh3 Predicted to enable ATPase, acting on DNA and DNA insertion or deletion binding activity. Predicted to contribute to mismatched DNA binding activity. Predicted to be involved in DNA metabolic process and positive regulation of helicase activity. Predicted to act upstream of or within DNA repair. Predicted to be part of MutSbeta complex. Human ortholog(s) of this gene implicated in colorectal carcinoma; endometrial cancer; endometrial carcinoma; familial adenomatous polyposis 4; and lung non-small cell carcinoma. Orthologous to human MSH3 (mutS homolog 3).

NR:

description
DNA mismatch repair protein Msh3 isoform X1

GO:

id name namespace
GO:0006298 mismatch repair biological_process
GO:0030983 mismatched DNA binding molecular_function
GO:0005524 ATP binding molecular_function

KEGG:

id description
K08736 MSH3; DNA mismatch repair protein MSH3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240647.1 False 3801 mRNA 0.48 24 18962324 19014100
XM_043240648.1 True 5532 mRNA 0.42 21 18962322 18999279
XR_006251073.1 False 4581 transcript 0.44 22 18962322 18999279

Neighbor

gene id symbol gene type direction distance location
ubac1 ubac1,LOC107699722,LOC107587514,LOC107555477,LOC106579794 coding upstream 601 18953377 ~ 18961721 (+)
pomt1 LOC107720285,LOC107699719,LOC107587516,LOC107756274,LOC107555474,LOC107703250 coding upstream 40807 18914683 ~ 18921515 (+)
LOC122345689 NA coding upstream 48242 18900511 ~ 18914080 (+)
gcnt4a LOC107699693,LOC107720226,LOC107587561,LOC107703224,LOC107555473,LOC107756273 coding upstream 71016 18890017 ~ 18891306 (+)
LOC122345996 NA coding upstream 72387 18885057 ~ 18889935 (+)
rasgrf2b rasgrf2b,rasgrf2,LOC107720279,LOC107756301,LOC107703251,LOC108423655 coding downstream 1211 19015311 ~ 19068269 (+)
ckmt2b ckmt2,ckmt2b,LOC107720280 coding downstream 54805 19068905 ~ 19074630 (+)
tent2 LOC107720275,LOC107699727,LOC107587508,LOC107756276,LOC107703258 coding downstream 143759 19157859 ~ 19164155 (+)
cmya5 cmya5,LOC107699728,LOC107720274,LOC107703257,LOC107555495,LOC107756304 coding downstream 150417 19164517 ~ 19177886 (+)
thbs4a thbs4,thbs4a,LOC107703260,LOC107555496,LOC107756306,LOC107720209 coding downstream 169908 19184008 ~ 19197620 (+)
G37620 NA non-coding upstream 35320 18925437 ~ 18927002 (+)
G37619 NA non-coding upstream 36889 18925210 ~ 18925433 (+)
G37618 NA non-coding upstream 37646 18923302 ~ 18924676 (+)
G37540 NA non-coding upstream 212267 18678596 ~ 18750055 (+)
G37501 NA non-coding upstream 574320 18386010 ~ 18388002 (+)
G37734 NA non-coding downstream 273916 19288016 ~ 19288328 (+)
G37843 NA non-coding downstream 579970 19594070 ~ 19647075 (+)
G37951 NA non-coding downstream 745611 19759711 ~ 19760204 (+)
G37956 NA non-coding downstream 780343 19794443 ~ 19867398 (+)
G37958 LOC107745529,LOC107672542,LOC107720246,LOC107552607 non-coding downstream 859142 19873242 ~ 19874144 (+)
G37626 LOC107720210 other upstream 21427 18938813 ~ 18940895 (+)
arsk arsk,LOC107703223,LOC107720292,LOC107756297 other upstream 114648 18842819 ~ 18847674 (+)
LOC122345691 NA other upstream 1434878 17526024 ~ 17527444 (+)
LOC122344991 camsap1b,LOC107587696,LOC107672541,LOC107552625,LOC107720249,LOC107745551 other upstream 1589463 17364849 ~ 17372859 (+)
G37228 ncor2,LOC107742750 other upstream 2400581 16486620 ~ 16561741 (+)
nrarpb nrarpb,nrarpa,nrarp,LOC108255347,LOC107595556 other downstream 693188 19707288 ~ 19710070 (+)
col27a1b col27a1b,col27a1,LOC107699687,LOC107720196,LOC107552608,LOC107731038,LOC107720245,LOC107672548,LOC107587699 other downstream 953477 19967577 ~ 20035380 (+)
lix1 lix1,LOC107552634,LOC107699708,LOC107587723,LOC107672536 other downstream 1129183 20143283 ~ 20151686 (+)
G38092 LOC107699781,LOC107552636,LOC107587661,LOC107672574 other downstream 1170935 20185035 ~ 20513916 (+)
LOC122345823 LOC107740804,LOC107665032,LOC108255802,LOC107672563,LOC107731037 other downstream 1270517 20284617 ~ 20297222 (+)

Expression


Co-expression Network