pole (pole,LOC107704563,LOC107668756)


Basic Information

Item Value
gene id pole
gene name pole,LOC107704563,LOC107668756
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 1579923 ~ 1597728 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240652.1
CTGTGGCTGAGGCGCAGTGGGAGCAACGGAAATATAGATATATGTCTACAATTTTCGTCAGCTATGGTTTTACAAAACAGTGGGCGATATAAATCAGACCGAGGTGGTGGAGATCAGGACAACCAGCAGGATGATGCATCAGCTTTGTCCGCTGTCAAGCGGCTGGAGCGCAGCCAGTTCACGGATGGGATGGATGAGCGCTTCGGCTTCGAACGGATGAAGGAACCTGGGGAGAAAACAGGATGGCTGATCAACATGCACCCGGCTGAGATTCTGGATGATGACAAGCGGATGATCAGTGCTGTGGACTATTACTTCATACAGGAGGATGGAAACAGATTCAAGATCGCTCTTCCCTATAAGCCGTATTTCTACATAGCCACTAAAAAGAACTGTGAAAGAGAGGTTATCTCCTTCCTGTCAAAAAAGTTCCAGGGAAAAGTGGCAAAGCTTGAAGTTGTCCCAAAGGAAGACTTAGATCTGCCTAATCACCTGGTGGGCCTGAAGAGGAATTACATCAAACTCTCTTTTAACACGGTGGACGACCTGGTTAAAGTGAAAAGAGAGATCTCGCCTGCTGTCCGcaagaacagagagagagagaagtccAATGATGCCTATACCAGCATGTTGTCCAGTGCTTTGGTTGGCGGGAGCGTAGTGACGGAGGATGAGGAAGGCACTTCGAAGAAAATGACTGAGCAGCTTGACAATATCGTAGACATGCGGGAATATGACGTGCCTTATCATATCCGCGTTTCTATTGACCTGAAGATTCATGTGGCTCACTGGTACAATGTGCGGTACAGAGGAAGTGCCTATCCTCCTGAGATTGTGCGCAGGGATGATCTTGTGGAAAGACCTGATCCTGTAGTGTTGGCGTTTGATATTGAGACCACTAAACTTCCACTGAAGTTTCCCGATGCTGAAACAGACCAGATTATGATGATATCATACATGATAGATGGGCagGGCTTCCTCATCACAAACAGAGAAATAGTCTCTGAGGACATTGAAGACTTTGAGTTCACCCCAAAACCCGAATATGAGGGCCCCTTCACTGTATTTAATGAGCCTGATGAGGCCTCTCTCATTCAGAGATGGTTTGAACACGTCCATGAGACCAAGCCGAACATTTTTGTCACTTACAACGGAGATTTCTTTGACTGGCCATTTGTAGAAGCCAGAGCGGCCCAGCTTGGCCTGAGTATGCATCGGGAGATCGGCTTTCAGAAGGACAATCAGGGGGAATATAAAGCCAGTCAGGCTATTCACATGGACTGCCTCAGGTGGGTAAAGAGAGACAGTTACCTGCCTGTAGGAAGTCATAACCTCAAAGCTGCAGCGAAGGCTAAGTTAGGCTATGACCCTGTAGAGCTGGACCCAGAGGAAATGTGCCGTATGGCTACTGAACAACCACAGacTCTGGCCACCTATTCAGTGTCTGATGCTGTGGCCACATACTACCTTTACATGAAATATGTTCATCCCTTCATTTTTGCCCTCTGCACTATAATTCCTATGGAACCTGATGAGGTTTTGCGGAAAGGCTCCGGTACCCTGTGTGAGGCCTTGCTGATGGTTCAGGCCTTCCATGTCAACATTGTCTTCCCAAACAAGCAGGAGCAGGTCTTTAACAAACTCACAGATGATGGCCATGTACTTGACACAGAGACTTATGTTGGCGGCCACGTCGAGGCTCTAGAGTCTGGTGTTTTTCGCAGTGATATTCCCTGCCGCTTTAAAATGAATCCAGCAGCATTTGACTTCTTAATTCAGAGGGTGGAGCGTACTCTTCGTCATGCAAttgaggaagaggagaagatTCCCCTTGAGCAGGTCACCAACTTTAATGAGGTGTGTGATGAAATCAAGAGGAAACTGATCTCTCTGAAGGAAGTGCCTAATAGAATTGAGTGTCCTCTTATTTACCATCTCGATGTGGGGGCCATGTACCCCAACATCATCCTCACCAACAGACTACAGCCCTCTGCCATGGTGGATGAGGCGACCTGTGCCGcctgtgattttaataaaccTGGTGCAAACTGTCAGCGCAGAATGACTTGGCAGTGGAGAGGAGAGATTATGCCTGCCAGTAGAAGTGAGTTTCATCGCATTCAGCAACAGCTGGAGTCTGAGAAGTTTCCTCCTCTTTTTCCTAATGGACCACCTCGTGCTTTTCATGAGCTCAACAGAGAAGAACAAGCACGGCATGAAAAGAAGCGGTTGGGAGACTACTGTCGAAAAGCCTATAAGAAGGTTCATCTGACCAGACTGGAGGAGAGAGTTACTACCATTTGCCAGAGAGAAAACTCTTTTTATGTTGACACGGTTCGAGCCTTCAGAGACCGCCGATATGAATTTAAAGGACTCCACAAGGTGTGGAAGAAGAAGCTGTCTACAGCGCAAGATAATGGGGACGCAGCGGAGGTGAAGCGCTGCAAAAACATGGAGATCCTTTATGAGTCTCTTCAACTGGCTCACAAGTGCATCCTTAACTCCTTCTACGGATATGTCATGAGAAAAGGAGCACGATGGTACTCGATGGAGATGGCGGGGATTGTCTGTTTCACTGGTGCCAACATTATCACACAGGCCAGAGAGCTCATTGAGCAGATTGGGAGGCCTCTTGAGTTGGACACTGATGGTATCTGGTGTGTTCTTCCCAACACCTTTCCTGAGAACTTTGTCATAAAATCCACCAATGAGAAGAAGGCAAAGGTGACCATCAGTTATCCAGGAGCTATGCTTAATATCATGGTCAAGGAGGGTTTCACAAATCATCAGTATCAAGAGCTGGTGGACCCAGCATCTTTAACATATGAGACCAGAGCTGAGAACAGTATCTTCTTTGAAGTTGATGGGCCATACTTGGCTATGATCCTGCCTGCCTCtaaagaagaaggaaaaaagctAAAGAAGAGGTATGCTGTGTTTAACGAGGACGGGTCGCTGGCTGAGCTGAAGGGCTTTGAGGTGAAGAGAAGAGGAGAACTTCAACTTATTAAGATCTTCCAGTCCTCTGTGTTTGAAGCCTTCCTGAAAGGCACAACTCTTGAAGAGGTTTATGCCTCTGTGGCGAAAGTGGCTGACTACTGGCTTGATGTGCTCTACAGCAAGgctGCTAACATGCCAGATGCAGAGTTATTTGAGCTGATTTCAGAAAACCGTTCCATGTCCCGTAAACTGGAAGATTATGGAGAGCAGAAGTCCACTTCCATCAGCACAGCAAAGCGTCTTGCAGAGTTCCTTGGTGATCAGATGGTGAAGGACGCTGGCCTGAGTTGTCGCTATGTCATCTCCCGCAAACCGGAGGGCTCACCAGTCACTGAAAGGGCAATCCCTCTGGCCATCTTTCAAGCTGAAGAGAGTGTTAAAAAGCATTTCCTACGCAAATGGCTGAAGATGCCCAGTCTCCATGACCTTGATATTAGATCTATTCTGGACTGGGGTTACTACATTGAGCGCTTGGGCAGTGCTATACAGAAGATCATCACTATCCCTGCAGCATTACAACAGgtGAAAAATCCTGTACCCCGAGTACGACATCCAGACTGGCTGCATAAGAAGCTTCTGGAAAAGAATGACATCTACAAGCAGAAGAAGATCAGTGAGCTCTTTACCAGTGAGGGAAAGAGACAGGTGGCCCAGCAGTCGTTACCAGCAGGTGTGACTCCCGATATGGAAGACTTCGGTGTTCCTCAGCGCCCTGTGCAGCCCGCCATACTCATCAGTACAAAGAGGAAGAGGATATCTCAAGGAGAGGACAGCCAGGCTGAGTCTCAAGAGCAAGAACTCACACAGTCTTGGAGAGAAATACTGGGGTCTCCACCAGCCATTGGCTCCTCTCGTgaggaACTTCTTGTCTGGTTGCGCTACCATAAGAAAAAATGGGAGCTGCAGCTTCGTCAGAGGAAAGAACGGCGGAAGCGGCGGCGTTTGATTGATGGGGGATCTCAGCCGACTGGCGGTGGCGTAATCCGTGGTGGACCGACCACAGGGCTGGGCAGTTTTCTGCGAAGAACTGCCCGCAGTATACTAGACATGCCCTGGCAAATTGTACAGATTGCAGAAACCAGTCACCCAGGCTTTTATAAGCTGTGGGCGGTCATTGGCAACGACCTGCACTGCATGAAGCTCAACATCCCACGAGTGTTTTATGTCAATCAGAAAGTACCCAAGCAAGAAGAAGGTGCTAATTGCAAAAAGGTGAACCGGATACTTCCACGCTCTGGTGTGGTGTATTATCTGTACCAGTATGCTGTTCCTGAGGACATGTACCAGGAACACATCAATGAGATCAATGCTGACCTCTCAGCTCCTGATATTGAGGGTGTCTATGAGACACAGGTTCCTCTGCTGTTCCGGGCTCTGGTCCAGTTGGGCTGCATGTGTATGGTCAATAAGCAGGTGGTCAGAGACCTGGCTGGCAGAGAGGCTGATACCTTTGACCTGGAGCATCTAGAGATGAGATCCCTGGCCCAGTTCAGCTACCTCGAGCCAGGCAGTGTAAGGCACATCTACCTATACCATCACAGTCAGGGCCATAAGGCTCTCTTTGGCCTCTTCATACCCTCTCAACGCAAAGCCAGCATCTTTGTTCTCGACACGGTACGCAGTAATCAGATGCCAAACCTAACTTCGTTGTACGGAGCAGAGCGCACAGCACTCCTCGAGAAGACCACTGAGGAGCTGCTGCCACCTGAGAAGCATCTGTTTGAAGTGCGTGCTGAGAACGACGTCAAAGCCATCTACCGCGCACTGCAGCGCATTCTCCTCAACTACAAGGAGGAGCGACGTGGTCCGACCCTGATTGCTGTTCAGTCTAACTGGGAGCTGCGCAGGCTGGCGGCTGGCATGACTGTACTGGAGGAGTTCCCGGTGGTTCCGGTTCACGTTATTGATGAGATAAGTTACAACGTACTGGACTGGCAGCGGCATGGAGCTCGTCGCATGATAAAACACTACCTGAACCTGGACAGCTGCCTCTCACAGGCTTTTGATATGGCCAGGTATTATCACCTGCCTGTGGGAAATCTGCCTCAGGACATTTCTATATTTGGATCAGATCTATTTCTTGCACGTCATCtgagaaagcacaaccacttgTTGTGGCTGTCACCTACGGCACGTCCGGACCTCGGGGGGAAAGAGGCTGACGACAGCAGACTGGTGATGGAGAGTGATGAGAGAGGCTCCATGGAGATCAATAGCCATGGCTGCTACTCAACAGTTTGTGTGGAGTTGGATATTCAGAGTTTGGCGGTGAACACCATTCTACAGTCCCAGCACGTCAATGACATGGAAGGCGGGGCCAGCATTGGTGTCAGCTTTGATGTCATTCAGCATGCTTCTCTGGAGGAAATGATGTCAGGGAATCAGGGGGCAAACACAGTGGCCAGCTATGACGAGACGGCGCTCTGCTCCAACACATTCAGGATTTTGAAGAGTATGGTTGTCGGTTGGGTCCGAGAGATCACGCAGTATCATAATGTCTACGCTGATAACCAGGTGATGCATTTTTACCGGTGGTTGCGATCACCCAGTTCTCTGCTGTACGACCCGGCCCTGCACCGAACCCTTCTCAACATGATGAAGAAGATCTTCCTGCAACTTGTGGCAGAGTTCAAGCGCCTGGGATCATCTGTCATCTATGGAAACTTTAACCGTCTCATCCTCTGCACCAAGAAACGGCGCATTGATGACGCCATTGCATACGTGGAGTACATCACTAACAgTATTCATTCAAAGGAGATCTTCCACTCTCTGTCCATCACATTCTCACGCTGTTGGGAATTTCTGCTGTGGATGGATCCAGCTAACTATGGAGGAGTGAAGGGAAAACTGCCCTCTAGCCTTCTGTATGGGGAGCATGGcaatgaaaagaagaaaaataaggatggagaagaggaggatggaagtgaagatgaggatgaagatgaagaaaaccAAGGGGAAGATGAAGAACGGGATGGGGAAGATGACGTAGAAGACTTGATAGAAAGTAACTGGAACATCATGCAGTACCTTCCTCAGACATCATCCTGTCAGAAATACTTTCTCATGATCATTTCAGCCTATATTGCAGCTGTCTATCACAGCATGAAACAAGAGCTTCGGCGAAACGCCCCTGGTGCTACTCCCATTAAGAGACGAGGAGCAACCCAAGCATCCCAGCAGCCAACTGGGGATGTCAGTGCACTTCCTGGTTTGATTACATTCTCTCAGGAGTATGTGTCAAGTGAACTCACACAGAACTTCTTCACCATCACTCAGAAGATTCAGAAGAAGGTGTCGAGCACTCGTAGTGTTACTCTTCCATCTGAGATGTTTCCTGTTCTTCCTGGTTCTCACTTACCCCTCAACAACCCAGCTCTAGAGTTTATTAAATACGTCTGCCAGGTGCTCTCTCTGGATGCCAACATTGTCAATCAGGTGAACAAACTGAAGCGAGATCTTTTGCGATTAGTGGATGTTGGAGAGTTTTCGGAGGACGCCCAGTTCCGTGACCCCTGCAAGTCCTACATCCTGCCAGAGGTCATCTGCCACCACTGTAACTTCTGTCGTGACCTTGACCTCTGCAAAGACCCTGCTGTTTCCCAGGATGGTTCAGTCCTTCCTCAGTGGTTCTGCTCTAACTGTCAGGCCCAATATGACACAGAGTCCATAGAAATGGCCCTGGTGGAGGCGCTCCAGAAGAAGCTCATGAGTTACACACTACAAGACCTGGAATGTTCTAAATGCAAAGGAGTGAAGGAAGCAAATATGCCAATGTACTGCAGCTGCGCTGGAGATTTCAACCTCACCTTCACCACAAAGAGCTTCACCGAACAGGTGGAAGTGTTCCGGAACATTGCTGCCCACTATAACATGAACTTCCTGCTAGAGACCATTGACTGGGTCCTTAGTATGAACGCATAGTGGCTTTTTCAACTGATACACTCCATCATTTGTGCCAAACAATGTGCGTGAGCAATTTGTACAGATCTGAATTCATACGAAATGTGTGTACATTATAACCATGGAACAATTGTGGTACTAGTACTTTGTGtgccaataaatatttttgtatatgaaGAATTAAGTTTTGCTATGATATCCAGTCATTACTCTCTAAGTAATTACATGCAAATTATGGTTTTGGTCATTTATGCTTACTAATCGAATCTGTAATGATATTTGCAGATGAGGGGTATCGCTCTTGTTCATAGTGGATGCTTCTACTGTCTCTTTAGTAATGGCCCATTTGgatattgtttctttttgacGTTTTTGAGTTTAAATTCTGTAAAGAATAtggcttttatatttttgtaatcacATATTGGATGGTGCAATAGCCAGCAACTACCCGGTTTAACTTAATGAGACATTCTCTTCACTGCCTGGCTCCTGCCCACTCTACATTACCACATTATAATTTGATTTCTTATCCCAGGCAAAGACCTGGACATCATGGAAATGTGTGACATGCTATGCAGCGTGCAATTTGAATCCATCCACTGTTGGGAATTGGCATTGCTGTACTCGGCCACTTTTactgaaatgtttctttttcccATGAGAGCAAAGGGCATTTAATTCAGAACAGGGTCTGGAGCACTTtggttttttcttctttgtccCTCAGCAAATGGTCAAATCTtggtatttcacattt

Function

symbol description
pole Predicted to enable DNA binding activity; DNA-directed DNA polymerase activity; and single-stranded DNA 3'-5' exodeoxyribonuclease activity. Predicted to be involved in DNA metabolic process and mitotic cell cycle. Predicted to act upstream of or within DNA repair and DNA replication. Predicted to be located in nucleus. Predicted to be part of epsilon DNA polymerase complex. Is expressed in proliferative region. Human ortholog(s) of this gene implicated in colorectal cancer. Orthologous to human POLE (DNA polymerase epsilon, catalytic subunit).

NR:

description
DNA polymerase epsilon catalytic subunit A

GO:

id name namespace
GO:0006260 DNA replication biological_process
GO:0005634 nucleus cellular_component
GO:0003887 DNA-directed DNA polymerase activity molecular_function
GO:0003677 DNA binding molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K02324 POLE; DNA polymerase epsilon subunit 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240652.1 True 7663 mRNA 0.48 50 1579923 1597728

Neighbor

gene id symbol gene type direction distance location
si:dkey-98f17.5 si:dkey-98f17.5,LOC107755832,LOC107599615,LOC107668759,LOC107704964,LOC108431725,LOC108255717,LOC107599159,LOC106580116 coding upstream 37539 1530761 ~ 1542384 (+)
rfc5 rfc5,LOC107716544,LOC107668751,LOC107704514 coding upstream 78072 1494928 ~ 1501851 (+)
spring1 zgc:110063,LOC107667499,LOC107755806,LOC107599146,LOC107704950 coding upstream 268930 1307563 ~ 1310993 (+)
tesca tesc,tesca,LOC107726727,LOC107667246,LOC107750755,LOC107566489 coding upstream 308666 1266077 ~ 1271257 (+)
fbxo21 fbxo21,LOC107726726,LOC107750754 coding upstream 314979 1257072 ~ 1264944 (+)
pes pes1,pes,LOC107704970 coding downstream 6085 1603813 ~ 1612548 (+)
gal3st1a gal3st1,gal3st1a,LOC107741514,LOC107653284,LOC107755837,LOC107668734 coding downstream 18334 1616062 ~ 1622327 (+)
ppil2 ppil2 coding downstream 25369 1623097 ~ 1652416 (+)
LOC122344671 LOC107755842,LOC107599645,LOC107599132 coding downstream 145587 1743315 ~ 1745171 (+)
ydjc LOC107741491,LOC107704612,LOC107599608,LOC107755843,LOC107668745,LOC107599128 coding downstream 176237 1773965 ~ 1779426 (+)
G32443 NA non-coding upstream 3653 1544752 ~ 1576270 (+)
G32439 NA non-coding upstream 66374 1513050 ~ 1513549 (+)
G32406 NA non-coding upstream 71816 1497804 ~ 1508107 (+)
G32381 NA non-coding upstream 154826 1422607 ~ 1425097 (+)
G32390 NA non-coding upstream 161437 1411723 ~ 1418486 (+)
G32499 NA non-coding downstream 55705 1653433 ~ 1653899 (+)
G32504 NA non-coding downstream 75301 1673029 ~ 1674356 (+)
LOC122345819 NA non-coding downstream 92381 1690109 ~ 1697674 (+)
G32513 mapk1,LOC107386038 non-coding downstream 108246 1705974 ~ 1706887 (+)
G32538 NA non-coding downstream 162266 1759994 ~ 1760230 (+)
selenoe fep15,LOC107667262,LOC107566481,LOC107750764,LOC108443918,LOC101066385,LOC105931211,LOC100703742 other upstream 464518 1112264 ~ 1115405 (+)
G32277 NA other upstream 522770 1055193 ~ 1057153 (+)
tal2 tal2,LOC107594599,LOC107725114,LOC107723303,LOC107667406 other upstream 1128558 450168 ~ 451365 (+)
LOC122346012 cunh9orf84,LOC107704297 other upstream 1132437 432779 ~ 447486 (+)
susd1 susd1,LOC107594557,LOC107704917,LOC107572260,LOC107667560 other upstream 1148458 419242 ~ 431465 (+)
ccl19a.2 ccl19a.2,LOC107704660,LOC107755825,LOC107599642,LOC107668736,LOC107599131,LOC107741495 other downstream 194100 1791828 ~ 1793266 (+)
G32611 prrc2b,LOC107704672 other downstream 224926 1822654 ~ 1826114 (+)
G32620 prrc2b,LOC107704672,LOC107562325 other downstream 237420 1835148 ~ 1843013 (+)
LOC122346050 nutf2,LOC107726276,LOC107692933,LOC107733565 other downstream 302899 1900627 ~ 1905499 (+)
LOC122345711 LOC107556260,LOC107714787,LOC107691117,LOC107551460,LOC107715220,LOC107690391,LOC565819 other downstream 412489 2010217 ~ 2019150 (+)

Expression


Co-expression Network