LOC122346063 (LOC107747844,LOC107554104,LOC107556635,LOC107667225)


Basic Information

Item Value
gene id LOC122346063
gene name LOC107747844,LOC107554104,LOC107556635,LOC107667225
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 2087785 ~ 2090156 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240718.1
ATGAGTTTCAGAAGGGGTGTACTccctGAGTCTGTCCTGGGCAGTATTCCTCTTCCCAGCTACCGGATCCTCTACTGCTCCCCCAGGGAGTGCAAGAACCGCAAATATGCGTTCAAGGTGGTTCATCAGGGCATGCGGCCGTACATCATGAGCGCTGAAACCCAGGAGGACATGCTGGGTTGGGTCAAggctctcagccaatcagcaagCATGGAGGCTGATGACATCATCAACAGGCGCTGTGCCAGTTTTCAGGACTTCACTCAGATGGGAGATAACGCCGAAACCATGGAGCTCCAGCACACGTTTCCAAAACAGGCCGTCACAAAACTGAGCAGGGTCCAGACAGAACCGACGCTGCTGGATCAGGACGGGACGGGAATTAAAATGAAGACACCAGAGCTGAGAGGAAGACACGAGAGCAGAGCGATCGCACCTGAAGCTACTAAGTATTCTCAGACTTTACTGAACGCAGAAGAGGAGCCTCTTTCCTTCCTACATCCGAAGGCAACCTTCAAGCAACCTTCATTTCTCAGAGATCAGTATGGGTCTCCGTGTCAGGGTAACGTGGGCAGAACAGATGTCTGGCCCTTGGATAACTGCTCGAGTGCTCCAATATCCCCCTGCATCTACACAGAGAGAGGACTTCTGCTCGACAAGcCTGAGTTTCCATGTTCTGTGTGCTACTCTTCCAACTACCACACGGCAGAACACGTGGCCATGTGCAAGGTAGGTAAACCAGACATCGTCCTAGAGAGAGAAATCCAACCAATCAGAGATCTGGAAAACGATACAGATGTGAGTGTATTGCAATGCGTGCATTTGTGAGAATAAAGTTATGAAAATTTTGTACACATTTGGGGCATTAAATAGTGTggttatttcagtaattcaaatCCTTCCTAAACTGTGTCATGGTGAGTAGAGAATTGTTGAAACTGACAATAGACTTAAGAAATGCTATTACAACAGAAGTCTATTTGTAACTTAAGAACTACCTTCACTTGATGACTGTTACACAAGCAACATcaaacaattttctttaaaatatttgagaCATTTCATAACTTCTTTGTTAAGAACATTTTCATGAATCCACCCAAGTGCTAGTTTAGTATTCTTAACATTctgttagtttttatttaaaaaaattcttcattttaaattttaatttaattttaaaaggcatagtaatttttcatttaattaaaaattc

Function

NR:

description
PREDICTED: pleckstrin homology domain-containing family A member 5-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240718.1 True 1216 mRNA 0.43 7 2087785 2090156

Neighbor

gene id symbol gene type direction distance location
LOC122344882 gnrhr4,LOC107715601,LOC107575089,LOC107690392,LOC107715190,LOC107691141 coding downstream 29052 2052705 ~ 2058733 (-)
LOC122344761 ngly1,LOC107748685,LOC107696895,LOC107739561,LOC107688325,LOC107579448 coding downstream 189195 1893780 ~ 1898590 (-)
ube2l3b ube2l3,ube2l3b,ube2l3a,ub2l3,LOC106562742,LOC107599129,LOC105014760 coding downstream 302396 1780165 ~ 1785389 (-)
sdf2l1 sdf2l1,LOC107704634,LOC107755844,LOC107668746 coding downstream 315993 1769436 ~ 1771792 (-)
top3b top3b,LOC107705001 coding downstream 342089 1733099 ~ 1745696 (-)
LOC122346100 LOC107757959,LOC107587426,LOC107709681,LOC107681216,LOC107560221,LOC107560220 coding upstream 294995 2385151 ~ 2418053 (-)
purba LOC107737074,LOC107755849,LOC107668742,LOC107670383,LOC107599601,LOC108431741,LOC107580671 coding upstream 434403 2524559 ~ 2527337 (-)
zgc:65851 zgc:65851,LOC107670379,LOC107708255,LOC107668750,LOC107599600,LOC107755851,LOC107573085 coding upstream 445869 2536025 ~ 2543574 (-)
mxd1 mxd1,LOC107670395,LOC107708253 coding upstream 465320 2555476 ~ 2579803 (-)
LOC122345702 figla coding upstream 517058 2607214 ~ 2609585 (-)
G32688 NA non-coding downstream 57292 2017378 ~ 2030493 (-)
G32682 LOC107551460,LOC107556260,LOC107715220,LOC107691117,LOC107714787,LOC107690391 non-coding downstream 87328 1999885 ~ 2000457 (-)
G32681 NA non-coding downstream 90942 1996276 ~ 1996843 (-)
G32675 NA non-coding downstream 121253 1966329 ~ 1966532 (-)
G32656 NA non-coding downstream 194710 1851228 ~ 1893075 (-)
G32701 NA non-coding upstream 133189 2223345 ~ 2224056 (-)
G32703 NA non-coding upstream 153511 2243667 ~ 2243883 (-)
G32707 NA non-coding upstream 178664 2268820 ~ 2269330 (-)
LOC122346102 NA non-coding upstream 265810 2355966 ~ 2356780 (-)
G32727 LOC107681241 non-coding upstream 283846 2374002 ~ 2375663 (-)
LOC122344636 pex11a,LOC107556261,LOC107714788,LOC107690406,LOC107691149,LOC107715221,LOC107551461 other downstream 64863 2020096 ~ 2022922 (-)
G32676 NA other downstream 120037 1966637 ~ 1967748 (-)
ypel1 ypel1,YPEL1,ypelc,ypel2b,LOC103374080,LOC106586007 other downstream 393499 1673024 ~ 1694286 (-)
lrrc74b lrrc74b,LOC107755819,LOC107667596,LOC107599620 other downstream 733371 1342606 ~ 1354414 (-)
castor1 gatsl3,LOC107755828,LOC107726730,LOC107704487 other downstream 751598 1312604 ~ 1336187 (-)
G32857 NA other upstream 406348 2496504 ~ 2554146 (-)
snrnp27 snrnp27 other upstream 490392 2580548 ~ 2585452 (-)
add2 add2,LOC107668755 other upstream 496431 2586587 ~ 2605917 (-)
LOC122344624 LOC107699921,LOC107708239,LOC107755860,LOC107697241,LOC107551809 other upstream 845587 2935743 ~ 3012819 (-)
G32908 sema4c,LOC107697240,LOC107708238,LOC107699920 other upstream 861306 2951462 ~ 2960177 (-)

Expression


Co-expression Network