eda (eda)


Basic Information

Item Value
gene id eda
gene name eda
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 13342146 ~ 13372469 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240759.1
GCAGTAGGTTATCAGCCTGAATCCTCGCAGTCCGAGGTCAGGAAGCCAGATGAGCCCGCAGAGAAGCGCTTGCTCACCGCGACCAGTCAAAGCCAAAAGTCGCTGAGAGGACGAGGAAGTTCGGTATGCAGAAGCAATGCTGACTGACCTGCACGCAGCCATGGTACCGAAGCGCGAGCCGGCGAAGTTGGAGGAGCGCGAGCGCACGCAGGCGGCGTGTGAGTGCCAAAGTCAGTGTAACAACTGCAAAATCTTCCTGAGTTTATTCatcctctcgctctctctgcaCCTCGTCACGCTCTTCTGCTACCTGGACCTGCGCTCGGAGCTCAAACGAGAAATATCTCAGAAGAACAAAGATGAGGTGTCATTAACGGGGCCGGTGCCGCACTATGAAGCCGCACCGCCAGTGCTCCGGTTACCGGACACCGACCACCCAACAATAGAAGACCAGAGCAGATGGAGGGATGAACACACAAGAGGGCTGGAGAGAGTCATTCATCGTACCAAACGTTCagAAActaatggaaaaaagaaaggagagcGGAAAAAAGGCAAGAAAGGACCCCCTGGCGCTCCTGGACCTCCAGGCCCACCTGGTCCACAAGGTCCACCTGGAATACCAGGGATCCCCGGAATCCCAGGCAGTAATGCGATGGGTCCCTCTGGCCCTCCCGGACCTCCCGGACCTGCAGGACCACCTGGACCACAAGGTCCACCTGGACCACAGGGACCTTCAGGTGGTGCAGATAAAGCCAGACACAGAGAGACGCAGCCAGCCGTGGTGCATCTTCAAGGTCAGGAAACTACTATCCAGGTGAAAGAAGatttGTCAGAAGGTGTGCTGAAAAATTGGAGAATGATCTCAATCCACCAGAGAGTGTTTAAAATGCACTCGCGCTCCGGAGAGCTGGAAGTCTTACTTGACggaacatattttatatatagtcaGGTAGAAGTATATTACCTGAACTTCACGGACATAGCGAGTTATGAGGTGATGGTGGATAAGACTCCATTCTTGCGCTGCACGCGAAGCATCGAGACGGGCCAGCGCAAGTTCAACACCTGCTACACCGCCGGAGTGTGTTTGCTGCGAGCCCGCCAGAGGATCTCCATCCGCATGGTGTACGAGGACACCTCCATCTCCATGAGCAACCACACCACCTTCCTCGGCAGCATCCGTCTAGGGGACGCTCCGGCCGCCGGACACACCTGAGCCCATCGGCGCGCGGGTCGACCcgatcagacacacacaacacGCTGATGAGCTCACAGACCACACCCACTGAACTCAACTGAGCCAGTACGTCTCGTTAGCACCGCCCCCCAAGGACACAGAGCCAACCATTTATGAACGACCGGGCTCATCTGCATATCTGCCGAGATGTCAGGCACATGTGACTATGTAGCATCACCGACACTGACCAAAACATCCGATTCTTTCTGAGCACTGAAACAGCCTTCGTCATTCCTCAAACACCAACAACGCAACATTGGCTTTCTAGTGAATAACCAAGATGCATTGTGTATCAGCCATTCTAGCAGCTTTCACCTAGCGACTGGATGAGctcagctgtgtgtgtatgtggtaTCCGGCACACGTAGCACAGGGAGGAAGTGTACCTGCAGTGACTGCAGAGACTGGAACTGTGAACGGAGTAATATACTCTATTCATTCAATGCCCGCTCAATCCATAAAAGACACACACTTCGGTAGATTAAACAGCAGATAAATAGTGAACTTGTGTACTTTTCTATTAAGCACTGATTATGGCAATGTATACAACAGAATATCTATGTTCAGTTATCACTAAACCTTTACAAATGCAGTCAAGATAGCCATTTTTAATATGAAGTCATGCAATTctgaaaatgtacagttttatgGTTCTTTGCTCTTGATCTGTAATTACCTGTGGGGGAAAAACTGTGAGGTGGCAGTAGTTCAGGCACTGAAATTGATGATAATCCACAATGGTCTTCCAGTATCCTAGTCTTTAACATCATCCTGAATATGCGATGCAATACCATATGCCTCCTGTAGGGGACAGCAGTGCTCCTCTTTAGAAAATGAAGTACTGAGTCTGGCTATGTTTGGAGTAGAATACTGTCGTACTTCGTTTACTTTTgcatcctatatatatatataaatataataatttatataaataatttgacagcatatatata
>XM_043240760.1
GCCGCAGTAGGTTATCAGCCTGAATCCTCGCAGTCCGAGGTCAGGAAGCCAGATGAGCCCGCAGAGAAGCGCTTGCTCACCGCGACCAGTCAAAGCCAAAAGTCGCTGAGAGGACGAGGAAGTTCGGTATGCAGAAGCAATGCTGACTGACCTGCACGCAGCCATGGTACCGAAGCGCGAGCCGGCGAAGTTGGAGGAGCGCGAGCGCACGCAGGCGGCGTGTGAGTGCCAAAGTCAGTGTAACAACTGCAAAATCTTCCTGAGTTTATTCatcctctcgctctctctgcaCCTCGTCACGCTCTTCTGCTACCTGGACCTGCGCTCGGAGCTCAAACGAGAAATATCTCAGAAGAACAAAGATGAGGTGTCATTAACGGGGCCGGTGCCGCACTATGAAGCCGCACCGCCAGTGCTCCGGTTACCGGACACCGACCACCCAACAATAGAAGACCAGAGCAGATGGAGGGATGAACACACAAGAGGGCTGGAGAGAGTCATTCATCGTACCAAACGTTCagAAActaatggaaaaaagaaaggagagcGGAAAAAAGGCAAGAAAGGACCCCCTGGCGCTCCTGGACCTCCAGGCCCACCTGGTCCACAAGGTCCACCTGGAATACCAGGGATCCCCGGAATCCCAGGCAGTAATGCGATGGGTCCCTCTGGCCCTCCCGGACCTCCCGGACCTGCAGGACCACCTGGACCACAAGGTCCACCTGGACCACAGGGACCTTCAGGTGGTGCAGATAAAGCCAGACACAGAGAGACGCAGCCAGCCGTGGTGCATCTTCAAGGTCAGGAAACTACTATCCAGGTGAAAGAAGatttGTCAGAAGGTGTGCTGAAAAATTGGAGAATGATCTCAATCCACCAGAGAGTGTTTAAAATGCACTCGCGCTCCGGAGAGCTGGAAGTCTTACTTGACggaacatattttatatatagtcaGGTATATTACCTGAACTTCACGGACATAGCGAGTTATGAGGTGATGGTGGATAAGACTCCATTCTTGCGCTGCACGCGAAGCATCGAGACGGGCCAGCGCAAGTTCAACACCTGCTACACCGCCGGAGTGTGTTTGCTGCGAGCCCGCCAGAGGATCTCCATCCGCATGGTGTACGAGGACACCTCCATCTCCATGAGCAACCACACCACCTTCCTCGGCAGCATCCGTCTAGGGGACGCTCCGGCCGCCGGACACACCTGAGCCCATCGGCGCGCGGGTCGACCcgatcagacacacacaacacGCTGATGAGCTCACAGACCACACCCACTGAACTCAACTGAGCCAGTACGTCTCGTTAGCACCGCCCCCCAAGGACACAGAGCCAACCATTTATGAACGACCGGGCTCATCTGCATATCTGCCGAGATGTCAGGCACATGTGACTATGTAGCATCACCGACACTGACCAAAACATCCGATTCTTTCTGAGCACTGAAACAGCCTTCGTCATTCCTCAAACACCAACAACGCAACATTGGCTTTCTAGTGAATAACCAAGATGCATTGTGTATCAGCCATTCTAGCAGCTTTCACCTAGCGACTGGATGAGctcagctgtgtgtgtatgtggtaTCCGGCACACGTAGCACAGGGAGGAAGTGTACCTGCAGTGACTGCAGAGACTGGAACTGTGAACGGAGTAATATACTCTATTCATTCAATGCCCGCTCAATCCATAAAAGACACACACTTCGGTAGATTAAACAGCAGATAAATAGTGAACTTGTGTACTTTTCTATTAAGCACTGATTATGGCAATGTATACAACAGAATATCTATGTTCAGTTATCACTAAACCTTTACAAATGCAGTCAAGATAGCCATTTTTAATATGAAGTCATGCAATTctgaaaatgtacagttttatgGTTCTTTGCTCTTGATCTGTAATTACCTGTGGGGGAAAAACTGTGAGGTGGCAGTAGTTCAGGCACTGAAATTGATGATAATCCACAATGGTCTTCCAGTATCCTAGTCTTTAACATCATCCTGAATATGCGATGCAATACCATATGCCTCCTGTAGGGGACAGCAGTGCTCCTCTTTAGAAAATGAAGTACTGAGTCTGGCTATGTTTGGAGTAGAATACTGTCGTACTTCGTTTACTTTTgcatcctatatatatatataaatataataatttatataaataatttgacagcatatatata
>XM_043240761.1
GCAGTAGGTTATCAGCCTGAATCCTCGCAGTCCGAGGTCAGGAAGCCAGATGAGCCCGCAGAGAAGCGCTTGCTCACCGCGACCAGTCAAAGCCAAAAGTCGCTGAGAGGACGAGGAAGTTCGGTATGCAGAAGCAATGCTGACTGACCTGCACGCAGCCATGGTACCGAAGCGCGAGCCGGCGAAGTTGGAGGAGCGCGAGCGCACGCAGGCGGCGTGTGAGTGCCAAAGTCAGTGTAACAACTGCAAAATCTTCCTGAGTTTATTCatcctctcgctctctctgcaCCTCGTCACGCTCTTCTGCTACCTGGACCTGCGCTCGGAGCTCAAACGAGAAATATCTCAGAAGAACAAAGATGAGGTGTCATTAACGGGGCCGGTGCCGCACTATGAAGCCGCACCGCCAGTGCTCCGGTTACCGGACACCGACCACCCAACAATAGAAGACCAGAGCAGATGGAGGGATGAACACACAAGAGGGCTGGAGAGAGTCATTCATCGTACCAAACGTTCagAAActaatggaaaaaagaaaggagagcGGAAAAAAGGCAAGAAAGGACCCCCTGGCGCTCCTGGACCTCCAGGCCCACCTGGTCCACAAGGTCCACCTGGAATACCAGGGATCCCCGGAATCCCAGGCAGTAATGCGATGGGTCCCTCTGGCCCTCCCGGACCTCCCGGACCTGCAGGACCACCTGGACCACAAGGTCCACCTGGACCACAGGGACCTTCAGGTGGTGCAGATAAAGCCAGACACAGAGAGACGCAGCCAGCCGTGGTGCATCTTCAAGGTCAGGAAACTACTATCCAGGTGAAAGAAGAAGGTGTGCTGAAAAATTGGAGAATGATCTCAATCCACCAGAGAGTGTTTAAAATGCACTCGCGCTCCGGAGAGCTGGAAGTCTTACTTGACggaacatattttatatatagtcaGGTAGAAGTATATTACCTGAACTTCACGGACATAGCGAGTTATGAGGTGATGGTGGATAAGACTCCATTCTTGCGCTGCACGCGAAGCATCGAGACGGGCCAGCGCAAGTTCAACACCTGCTACACCGCCGGAGTGTGTTTGCTGCGAGCCCGCCAGAGGATCTCCATCCGCATGGTGTACGAGGACACCTCCATCTCCATGAGCAACCACACCACCTTCCTCGGCAGCATCCGTCTAGGGGACGCTCCGGCCGCCGGACACACCTGAGCCCATCGGCGCGCGGGTCGACCcgatcagacacacacaacacGCTGATGAGCTCACAGACCACACCCACTGAACTCAACTGAGCCAGTACGTCTCGTTAGCACCGCCCCCCAAGGACACAGAGCCAACCATTTATGAACGACCGGGCTCATCTGCATATCTGCCGAGATGTCAGGCACATGTGACTATGTAGCATCACCGACACTGACCAAAACATCCGATTCTTTCTGAGCACTGAAACAGCCTTCGTCATTCCTCAAACACCAACAACGCAACATTGGCTTTCTAGTGAATAACCAAGATGCATTGTGTATCAGCCATTCTAGCAGCTTTCACCTAGCGACTGGATGAGctcagctgtgtgtgtatgtggtaTCCGGCACACGTAGCACAGGGAGGAAGTGTACCTGCAGTGACTGCAGAGACTGGAACTGTGAACGGAGTAATATACTCTATTCATTCAATGCCCGCTCAATCCATAAAAGACACACACTTCGGTAGATTAAACAGCAGATAAATAGTGAACTTGTGTACTTTTCTATTAAGCACTGATTATGGCAATGTATACAACAGAATATCTATGTTCAGTTATCACTAAACCTTTACAAATGCAGTCAAGATAGCCATTTTTAATATGAAGTCATGCAATTctgaaaatgtacagttttatgGTTCTTTGCTCTTGATCTGTAATTACCTGTGGGGGAAAAACTGTGAGGTGGCAGTAGTTCAGGCACTGAAATTGATGATAATCCACAATGGTCTTCCAGTATCCTAGTCTTTAACATCATCCTGAATATGCGATGCAATACCATATGCCTCCTGTAGGGGACAGCAGTGCTCCTCTTTAGAAAATGAAGTACTGAGTCTGGCTATGTTTGGAGTAGAATACTGTCGTACTTCGTTTACTTTTgcatcctatatatatatataaatataataatttatataaataatttgacagcatatatata

Function

symbol description
eda Predicted to enable death receptor agonist activity and death receptor binding activity. Acts upstream of or within bone development and odontogenesis. Predicted to be located in membrane. Predicted to be active in extracellular space. Is expressed in dental mesenchyme; integument; pharyngeal arch; and pharynx. Human ortholog(s) of this gene implicated in ectodermal dysplasia 1 and tooth agenesis. Orthologous to human EDA (ectodysplasin A).

NR:

description
PREDICTED: ectodysplasin-A

GO: NA

KEGG:

id description
K05480 EDA; ectodysplasin-A

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240759.1 True 2193 mRNA 0.50 8 13342149 13372469
XM_043240760.1 False 2190 mRNA 0.50 8 13342146 13372469
XM_043240761.1 False 2184 mRNA 0.50 8 13342149 13372469

Neighbor

gene id symbol gene type direction distance location
nalf2 fam155b,LOC107548493,LOC107746345,LOC107655916,LOC107596158,LOC107757536 coding upstream 4008 13334755 ~ 13338138 (+)
steep1 zgc:103697,cunhxorf56,LOC107548454,LOC107655899,LOC101478835 coding upstream 184909 13151621 ~ 13157237 (+)
stard8 LOC107757534,LOC107596160,LOC107548495,LOC107746344,LOC107700913 coding upstream 234574 13066436 ~ 13107572 (+)
yipf6 yipf6,LOC107596694,LOC107746343,LOC107757533,LOC107596161,LOC107655918 coding upstream 285786 13051667 ~ 13056360 (+)
ar ar,LOC107757532,LOC107596701 coding upstream 319373 12965936 ~ 13022773 (+)
wnt11f2 wnt11,LOC107746349,LOC107548453,LOC107655896,LOC107596154,LOC107757514,LOC107700898 coding downstream 4068 13376537 ~ 13379768 (+)
igbp1 LOC107746347,LOC107700909,LOC107548490,LOC107655913,LOC107757539 coding downstream 10743 13383212 ~ 13387955 (+)
micu2 LOC107700905,LOC107746354,LOC107596152,LOC107655910,LOC107757544,LOC107548488 coding downstream 40151 13412620 ~ 13418968 (+)
nova1 nova1,LOC107757545,LOC107655909,LOC107700904,LOC107746355,LOC107548487,LOC103377877 coding downstream 46887 13419356 ~ 13437936 (+)
alkbh6 LOC107746424,LOC107548452,LOC107700897,LOC107655907,LOC107757515,LOC107596150 coding downstream 68979 13441448 ~ 13447200 (+)
G36109 NA non-coding upstream 17763 13324033 ~ 13324383 (+)
LOC122345423 NA non-coding upstream 29494 13299755 ~ 13312652 (+)
G36062 NA non-coding upstream 233293 13108632 ~ 13108853 (+)
G35905 NA non-coding upstream 456212 12885331 ~ 12885934 (+)
G35904 NA non-coding upstream 456862 12885005 ~ 12885284 (+)
G36140 NA non-coding downstream 147504 13519973 ~ 13521608 (+)
G36141 NA non-coding downstream 194508 13566977 ~ 13580798 (+)
G36168 NA non-coding downstream 275457 13647926 ~ 13648538 (+)
G36191 NA non-coding downstream 348316 13720785 ~ 13721566 (+)
G36198 NA non-coding downstream 359500 13731969 ~ 13732456 (+)
LOC122346073 LOC107654625,LOC107597279,LOC107741224,LOC107696048,LOC107727161 other upstream 534795 12803789 ~ 12807351 (+)
iscu si:ch211-191d15.2,iscu,LOC107597282,LOC104937683 other upstream 636901 12703352 ~ 12705245 (+)
si:ch211-225b11.4 si:ch211-225b11.4,LOC107743340,LOC107597327,LOC107654601,LOC107580265,LOC107735986 other upstream 813356 12514013 ~ 12528790 (+)
G35720 LOC107654642,LOC107597266,LOC107743332,LOC107741203,LOC107557123,LOC107663229 other upstream 1086474 12249138 ~ 12255672 (+)
smarca1 smarca1,LOC107597262,LOC107672796,LOC107741199,LOC107663213,LOC103034185,LOC105028962,LOC105893234,LOC106603320 other upstream 1399036 11924228 ~ 11943110 (+)
ins ins,LOC107596207 other downstream 611628 13984097 ~ 13985706 (+)
G36495 NA other downstream 917951 14290420 ~ 14292500 (+)
LOC122345142 NA other downstream 927574 14300043 ~ 14305304 (+)
LOC122345214 NA other downstream 960554 14333023 ~ 14337765 (+)
mrpl1 LOC107663378,LOC107746869,LOC107752362,LOC107599195 other downstream 975093 14347562 ~ 14349991 (+)

Expression


Co-expression Network