lrp13 (LOC107725159,LOC107594583,LOC107704910)


Basic Information

Item Value
gene id lrp13
gene name LOC107725159,LOC107594583,LOC107704910
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 399992 ~ 411093 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240767.1
CGTCACCTGATCAATTAAGCAGCATCAGCCTCAGCTGTTCTCTCGATTAAAGCGCGTCTTCTCGAACCGAGGCGGTTTGACCCGCTCGTCCCTGCAGTCATGTGTTTGTTAGTGCTGCTGAACGTCGCTTCAGGGATCTTTCTGCTTCTGAGAGCTGAATGCGTGCAGGCTGCAGTAGCTTCTCGTGGTGTTCCCCTGCACTGCAGACTGGGCTTCAAACCCTGTAAGGACGGATCAGAGTGTGTGCTGTACAGTCATGTGTGTGACGGCGAGAACGACTGTCCTGACGGCTCTGATGAAGACGAATGTGCTGCTGTCTGCAGCATAGGTCAGTTTCAGTGTGCCCACGGTAAGAAGTGCATCGAGCGCCGGCAGGTGTGTGACGGTGTGGCTCAGTGTCAGGATCGCTCCGATGAAGTCGACTGCTTCAAGCCAGAGGAGGGCTGCGGTCATCGCTGCGATAAAAACCGCTGCATCCCAGAATCCTTTGTCTGTGATGGAGATGCAGACTGTGCTGACGGCAGCGATGAAGCCAGCTGTGATATCAGCCCTGGTGATGATAATGACAtcaaagaggaggaagaggaaaaaaagacggAGAATGAAGTCTCAGGAAGCCCTCATGTAACTAAAGGACCTCTGCACTGTTCATTCGGCTCCAAGTTATGTAGAGACGGGACGGACTGTGTACTCTTTAATCACTTGTGTGACGGCGAGCTTGACTGTAATGACGGGTCTGATGAAGACGACTGCTCTGAGAAGTGTGAAAATGGTCAGTTTCAGTGTGCCCACGGTAAGAAGTGCATCGAGCGCCGGCAGGTGTGTGACGGTGTGGCTCAGTGTCAGGATCGCTCCGATGAAGTCGACTGCTTCAAGCCAGAGGAGGGCTGCGGTCACCGCTGCGATAAAAACCGCTGCATCCCAGAATCCTTTGTCTGTGATGGAGATGCAGACTGTGCTGACGGCAGCGATGAAGCCAGCTGTGGTGAGGAGAGCTGCAGCAGTGCTGAATGGCAGTGCAGCAGCGGTCAGTGCGTTTCAGTCAGTATGCGCTGTGATGGACACCCGGACTGCAGAGATCATTCAGACGAGGAGGGCTGCACCGAACCTCCGCCCTGCAGCACACAGCGCCGCTGTCCGAAGAGCCAGGAGTGTCTGCTGGACGAGTGGATGTGTGACGGAGAGACGGACTGCAAGGATGGCACGGATGAGAAGAACTGTAAGGAGTCTCCAGTGCAGTGCGGTGAGTTCCAGTGGCCTTGCAGCTCTAACACGCAGTGTATTCCTGAAGCCTGGCGCTGTGACGGCGCTGAAGACTGCAGGGATGGAAGCGACGAATCTGCTTGTCCGAGTGTGTCCTGTCCTCCTCACATGTTCCAGTGTGGTAGCTCGGAGTGTGTGGACCCGTCTCAGCTCTGTAATGGAGTCACTAACTGTCTGGACGGTTCTGACGAGGGTGGGACCTGTAAGACGGACAAATGTTCTGATCCGTCAAAGTGTGCACAGGACTGCCACAGCACACCTACAGGCAAGCGCTGTTTTTGCAGGATGGGCTACAAGCCCGTGGATAGTGGTGCGGTGTGTGTTGATGTGGATGAGTGTGTGGACCGTCCAGACTTCTGTTCACACTACTGTAACAACACTCAGGGCTCATTCGAGTGCTCTTGTAGTCATGGTTATGTTCTGGAACCTGATGGCCACAGTTGCAAAATCACAGGTGAGCCGTACCTGCTGGCATCTGTGCAGTCTGAGGTCTTCCTGCTGGGTCTGAGGAGCTCCAGTCTGGACGTTCTGCTCTCGtcagaaaagcattttgttCTATCACTTGACTACGACTGGCAGAAGCAGAGAGTGTACTGGATCAACCTCAACACGGACAACATAAAATGGTTGTCACTAGATCAGAAGAGCAAAGGAACCTTTATTAGAGGTATCAATGCAGACAGTCTGGCAGTGGACTGGGTGGCGAGAAACCTCTACTGGGCTGATGGCGTCAACAGCCAGATCAACGCAGTAGGACTGGACGGTGACGTCACCAGAACCACAGACCGTGTGGTGATCCTGAGTGAAGATCTAGGGCAGCTTCGCTCCATCGCTCTGCTGCCACAGGAAGGAATTATGTTCTGGTCAGAAACTGGGGATGAGGCTCAGATAGAAAGAGCAGGAATGGACGGCTCAGACAGACGTGTGCTGGTCAGTCGCTCTCTCCGATGGCCGGTCAGTTTGACAGTGGACTCCCTGCATCACAAAATCTACTGGACAGATGAGAAACTCAAGTGCATAGGATCAGCCAATTTTGATGGAGGAGATATTAAgATCTTGCAGATGATGGAGACCCCCAGTCCATTCTCAGTATCTGTATTCAATGATAAGGTCTACTGGTCTGATACCAAACGAGGAACCATTCAGAGAGCTCACAAAATCACGGGCAAACTGCGCCAAGTCCTGCTCAAACGTCCTGGACAGCCATTTGGTTTAAAGgtcATTCATGGACTTTTCCAAGTGGGCGTCCCTAACCCGTGTGCTTCCCAGCGCTGCTCTCACCTGTGTGTTTTATCCCCGGGGATGAAGGCTGTGTGCAAGTGTCCGTCTCAGTTGCTGCTGGATGAAGACGGGCTGAGCTGCTCCAAACACAAAGACTTGTCCTTCCTGCTGTTTCTTTCTCCAGCTGCAGTCACGCAGGTTTATTTACAGAACAGACATGGCAACATGGGCCTGAAGAACTGGCCTGAACATCGGCGTTTCGACCTTCCCAACATGAACAAGCCGACCATGTTAGATTTAGTGCTGCGTGACCTCACCCTGTACGTGTCCGATAGCGGGCAGCCCATTGTAGGGCTCTTCAAGATGAAGGATACAGCGCTGGTGCCTCGTGGGAAGCTGCTCCAGCTACATAAGGACTCGCTGCGCACGTTCTCAGTGGACTGGATCACTTTGAACGTGTACTGGAGCAGCGAGAAGCTGCACGGCCTGCAGGTCACCTCGTCGGATGGAGCACACACCAGTGTGATAATAAAGGACGGTGTCGGAGCCATTGACTCTATTGCTGTAGACCCACCCAGCGGACACCTCTGCTTCTCAAACAAAGTCCAGGAAGGTCACACGACGCGGGTGGAGTGTGCCTATATGAACGGACAGAACAGGACAGTGGTGTGGAGTAATTCAGTCCGGCCAACTTCACTGATCTTGACAGATGAAGGGAATAAACTGTACTGGGCCGACACTGGTCTCTCAGTAATCGGTTCAGTTTCTGTAGATGGTTCTGGATACAAGGAAATAAAGACAGAAGGCAGCTTGATTGCATTTGCCTTGGTTAATAAAGTTCTTGTTTggattacaaaaaaagAGTCCACTAAGTGTTGGTTTAGTGATGACGAGCATACAGGGAAACTGTGGTTTGAAGTGGACGCCGACATTGTGGGTCTGAAAGCCTTCGCAAAGTCAAGACAAAAAGGCACCAATCTGTGCTCTAATGGTAATGGAGGTTGCGGTCACCTCTGTCTTGCGTTCCCCGGAGGAATGGCATGCCACTGTGACCATAATCACCGCCTGGTCAACAGCAGAGACTGCAGTCCAGACCCCCGCTGCCCTGAAGGCACCAAACCATGCCTGAGCGAACACATCTGTCTACCTCTGGAGCAGTTCTGCAACGGCGTCGCCGACTGCCCAGATCATTCTGACGAGAACTGTTTACAGGATAAGCAGAATAATGTCTGGCTCAATCCTAAAGTGTTTCGTCCAGGCTTGAGTGATAATGTCATACCAGAGAACGTGGAGTCTGAGGCTTGTAGTGTTACACTGTGTAACGGCAACGGTAACTGTGAAACCCAGAACggagtgactgtgtgtgtctgtgaggcGGGTTACACCGGAGAGCACTGCCTGGATGCTTCGAGCGGCCTCTCAGAGGGGCCACTTCTCTATGGAGTAGTCGGACTGTGTGCCGCTTTGGTCGTCCTGGGGGCCATCTTCGGTATCATTCAGAGGAAAAAAGCCACAAACCGGAGGCAAACCACGCGGGTTATGGACACGCAGGAAACGGGCATGAAGAAACTAGAAAGACGAGAGAAATCTTCAGAGAAAAAATCTAATGGAAAAGACACCGAATTCTCAGAGGAAAATGTGGTAACGTCTGTGGACTAGCTTCATCTCGACAGTGGCATCTTGgtttcttttgaaataaaacggCTGCATTTTGAAAAGTCA
>XM_043240768.1
CGTCACCTGATCAATTAAGCAGCATCAGCCTCAGCTGTTCTCTCGATTAAAGCGCGTCTTCTCGAACCGAGGCGGTTTGACCCGCTCGTCCCTGCAGTCATGTGTTTGTTAGTGCTGCTGAACGTCGCTTCAGGGATCTTTCTGCTTCTGAGAGCTGAATGCGTGCAGGCTGCAGTAGCTTCTCGTGGTGTTCCCCTGCACTGCAGACTGGGCTTCAAACCCTGTAAGGACGGATCAGAGTGTGTGCTGTACAGTCATGTGTGTGACGGCGAGAACGACTGTCCTGACGGCTCTGATGAAGACGAATGTGCTGCTGTCTGCAGCATAGGTCAGTTTCAGTGTGCCCACGGTAAGAAGTGCATCGAGCGCCGGCAGGTGTGTGACGGTGTGGCTCAGTGTCAGGATCGCTCCGATGAAGTCGACTGCTTCAAGCCAGAGGAGGGCTGCGGTCATCGCTGCGATAAAAACCGCTGCATCCCAGAATCCTTTGTCTGTGATGGAGATGCAGACTGTGCTGACGGCAGCGATGAAGCCAGCTGTGGTGAGGAGAGCTGCAGCAGTGCTGAATGGCAGTGCAGCAGCGGTCAGTGCGTTTCAGTCAGTATGCGCTGTGATGGACACCCGGACTGCAGAGATCATTCAGACGAGGAGGGCTGCACCGAACCTCCGCCCTGCAGCACACAGCGCCGCTGTCCGAAGAGCCAGGAGTGTCTGCTGGACGAGTGGATGTGTGACGGAGAGACGGACTGCAAGGATGGCACGGATGAGAAGAACTGTAAGGAGTCTCCAGTGCAGTGCGGTGAGTTCCAGTGGCCTTGCAGCTCTAACACGCAGTGTATTCCTGAAGCCTGGCGCTGTGACGGCGCTGAAGACTGCAGGGATGGAAGCGACGAATCTGCTTGTCCGAGTGTGTCCTGTCCTCCTCACATGTTCCAGTGTGGTAGCTCGGAGTGTGTGGACCCGTCTCAGCTCTGTAATGGAGTCACTAACTGTCTGGACGGTTCTGACGAGGGTGGGACCTGTAAGACGGACAAATGTTCTGATCCGTCAAAGTGTGCACAGGACTGCCACAGCACACCTACAGGCAAGCGCTGTTTTTGCAGGATGGGCTACAAGCCCGTGGATAGTGGTGCGGTGTGTGTTGATGTGGATGAGTGTGTGGACCGTCCAGACTTCTGTTCACACTACTGTAACAACACTCAGGGCTCATTCGAGTGCTCTTGTAGTCATGGTTATGTTCTGGAACCTGATGGCCACAGTTGCAAAATCACAGGTGAGCCGTACCTGCTGGCATCTGTGCAGTCTGAGGTCTTCCTGCTGGGTCTGAGGAGCTCCAGTCTGGACGTTCTGCTCTCGtcagaaaagcattttgttCTATCACTTGACTACGACTGGCAGAAGCAGAGAGTGTACTGGATCAACCTCAACACGGACAACATAAAATGGTTGTCACTAGATCAGAAGAGCAAAGGAACCTTTATTAGAGGTATCAATGCAGACAGTCTGGCAGTGGACTGGGTGGCGAGAAACCTCTACTGGGCTGATGGCGTCAACAGCCAGATCAACGCAGTAGGACTGGACGGTGACGTCACCAGAACCACAGACCGTGTGGTGATCCTGAGTGAAGATCTAGGGCAGCTTCGCTCCATCGCTCTGCTGCCACAGGAAGGAATTATGTTCTGGTCAGAAACTGGGGATGAGGCTCAGATAGAAAGAGCAGGAATGGACGGCTCAGACAGACGTGTGCTGGTCAGTCGCTCTCTCCGATGGCCGGTCAGTTTGACAGTGGACTCCCTGCATCACAAAATCTACTGGACAGATGAGAAACTCAAGTGCATAGGATCAGCCAATTTTGATGGAGGAGATATTAAgATCTTGCAGATGATGGAGACCCCCAGTCCATTCTCAGTATCTGTATTCAATGATAAGGTCTACTGGTCTGATACCAAACGAGGAACCATTCAGAGAGCTCACAAAATCACGGGCAAACTGCGCCAAGTCCTGCTCAAACGTCCTGGACAGCCATTTGGTTTAAAGgtcATTCATGGACTTTTCCAAGTGGGCGTCCCTAACCCGTGTGCTTCCCAGCGCTGCTCTCACCTGTGTGTTTTATCCCCGGGGATGAAGGCTGTGTGCAAGTGTCCGTCTCAGTTGCTGCTGGATGAAGACGGGCTGAGCTGCTCCAAACACAAAGACTTGTCCTTCCTGCTGTTTCTTTCTCCAGCTGCAGTCACGCAGGTTTATTTACAGAACAGACATGGCAACATGGGCCTGAAGAACTGGCCTGAACATCGGCGTTTCGACCTTCCCAACATGAACAAGCCGACCATGTTAGATTTAGTGCTGCGTGACCTCACCCTGTACGTGTCCGATAGCGGGCAGCCCATTGTAGGGCTCTTCAAGATGAAGGATACAGCGCTGGTGCCTCGTGGGAAGCTGCTCCAGCTACATAAGGACTCGCTGCGCACGTTCTCAGTGGACTGGATCACTTTGAACGTGTACTGGAGCAGCGAGAAGCTGCACGGCCTGCAGGTCACCTCGTCGGATGGAGCACACACCAGTGTGATAATAAAGGACGGTGTCGGAGCCATTGACTCTATTGCTGTAGACCCACCCAGCGGACACCTCTGCTTCTCAAACAAAGTCCAGGAAGGTCACACGACGCGGGTGGAGTGTGCCTATATGAACGGACAGAACAGGACAGTGGTGTGGAGTAATTCAGTCCGGCCAACTTCACTGATCTTGACAGATGAAGGGAATAAACTGTACTGGGCCGACACTGGTCTCTCAGTAATCGGTTCAGTTTCTGTAGATGGTTCTGGATACAAGGAAATAAAGACAGAAGGCAGCTTGATTGCATTTGCCTTGGTTAATAAAGTTCTTGTTTggattacaaaaaaagAGTCCACTAAGTGTTGGTTTAGTGATGACGAGCATACAGGGAAACTGTGGTTTGAAGTGGACGCCGACATTGTGGGTCTGAAAGCCTTCGCAAAGTCAAGACAAAAAGGCACCAATCTGTGCTCTAATGGTAATGGAGGTTGCGGTCACCTCTGTCTTGCGTTCCCCGGAGGAATGGCATGCCACTGTGACCATAATCACCGCCTGGTCAACAGCAGAGACTGCAGTCCAGACCCCCGCTGCCCTGAAGGCACCAAACCATGCCTGAGCGAACACATCTGTCTACCTCTGGAGCAGTTCTGCAACGGCGTCGCCGACTGCCCAGATCATTCTGACGAGAACTGTTTACAGGATAAGCAGAATAATGTCTGGCTCAATCCTAAAGTGTTTCGTCCAGGCTTGAGTGATAATGTCATACCAGAGAACGTGGAGTCTGAGGCTTGTAGTGTTACACTGTGTAACGGCAACGGTAACTGTGAAACCCAGAACggagtgactgtgtgtgtctgtgaggcGGGTTACACCGGAGAGCACTGCCTGGATGCTTCGAGCGGCCTCTCAGAGGGGCCACTTCTCTATGGAGTAGTCGGACTGTGTGCCGCTTTGGTCGTCCTGGGGGCCATCTTCGGTATCATTCAGAGGAAAAAAGCCACAAACCGGAGGCAAACCACGCGGGTTATGGACACGCAGGAAACGGGCATGAAGAAACTAGAAAGACGAGAGAAATCTTCAGAGAAAAAATCTAATGGAAAAGACACCGAATTCTCAGAGGAAAATGTGGTAACGTCTGTGGACTAGCTTCATCTCGACAGTGGCATCTTGgtttcttttgaaataaaacggCTGCATTTTGAAAAGTCA

Function

NR:

description
PREDICTED: low-density lipoprotein receptor-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240767.1 True 4206 mRNA 0.52 21 399992 411093
XM_043240768.1 False 3762 mRNA 0.52 19 399992 411093

Neighbor

gene id symbol gene type direction distance location
si:ch211-12e13.10 NA coding downstream 309 398419 ~ 399683 (-)
LOC122345880 NA coding downstream 27174 371671 ~ 372818 (-)
adamts12 LOC107725168,LOC107704241,LOC107594580,LOC107750303,LOC107658289,LOC107567650 coding downstream 60261 316841 ~ 339731 (-)
fgf10b fgf10,LOC107705049,LOC107725110,LOC107594591,LOC107658296,LOC107567653 coding downstream 86964 301638 ~ 313028 (-)
mybbp1a mybbp1a,LOC107658206,LOC107704885,LOC107594578,LOC107567654,LOC107750298 coding downstream 100611 287133 ~ 299381 (-)
gak gak,LOC107704343,LOC107667379 coding upstream 75951 487044 ~ 511879 (-)
sh2b3 sh2b3,LOC107594562,LOC107550292,LOC107704923 coding upstream 102339 513432 ~ 549044 (-)
pheta1 LOC107653115,LOC107725116,LOC107594559,LOC107550295,LOC107723306,LOC107687307 coding upstream 138708 549801 ~ 555622 (-)
ier3 LOC107723299,LOC107667686,LOC107653130,LOC107567455,LOC107751423,LOC107550277 coding upstream 182410 593503 ~ 594649 (-)
tor4ab LOC107653139,LOC107751425,LOC107723309,LOC107550278,LOC107567459,LOC107667676 coding upstream 195277 606370 ~ 613827 (-)
G32150 NA non-coding downstream 47913 350967 ~ 352079 (-)
G32086 NA non-coding downstream 195456 162490 ~ 204536 (-)
G32102 NA non-coding downstream 374100 25514 ~ 25892 (-)
G32100 NA non-coding downstream 382477 16470 ~ 17515 (-)
G32099 NA non-coding downstream 384687 12703 ~ 15305 (-)
G32177 NA non-coding upstream 20537 431630 ~ 431890 (-)
G32186 NA non-coding upstream 45024 456117 ~ 482271 (-)
G32187 ugt2b3,ugt2b1,LOC107667397,LOC107725113,LOC107667542,LOC107723313 non-coding upstream 47387 458480 ~ 479881 (-)
G32191 NA non-coding upstream 53971 465064 ~ 470468 (-)
G32194 LOC107667397,LOC107723313,LOC107572263,LOC107725113 non-coding upstream 54942 466035 ~ 471546 (-)
kcnv2b atp5ib,atp5i,atp5ia,kcnv2b,LOC107703581,LOC107725101,LOC107704252,LOC107594594,LOC107723293 other downstream 12114 382052 ~ 387878 (-)
rictora rictora,LOC107704198,LOC107658248,LOC107567655,LOC107750288,LOC107594576,LOC107725140 other downstream 138321 239951 ~ 261671 (-)
G32104 LOC107725162,LOC107594575 other downstream 363644 35777 ~ 36348 (-)
G32103 LOC107725162,LOC107704185,LOC107594575 other downstream 365275 33779 ~ 34717 (-)
G32101 LOC107594575,LOC107725162,LOC107704185 other downstream 376043 20139 ~ 23949 (-)
ddr2l ddr2l,LOC107704361,LOC107725118,LOC107550294,LOC107723312,LOC107667359,LOC108444179 other upstream 145561 556654 ~ 583095 (-)
wdr31 wdr31,si:ch73-266o15.4,LOC107653158,LOC107667323,LOC107751417 other upstream 211421 622514 ~ 631126 (-)
castor1 gatsl3,LOC107755828,LOC107726730,LOC107704487 other upstream 901511 1312604 ~ 1336187 (-)
lrrc74b lrrc74b,LOC107755819,LOC107667596,LOC107599620 other upstream 931513 1342606 ~ 1354414 (-)
ypel1 ypel1,YPEL1,ypelc,ypel2b,LOC103374080,LOC106586007 other upstream 1261931 1673024 ~ 1694286 (-)

Expression


Co-expression Network