si:ch211-12e13.10


Basic Information

Item Value
gene id si:ch211-12e13.10
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 398419 ~ 399683 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240769.1
atgcaatttaaagTACAAAGGAAGGTGCAACACTACAGAAGGTCCGTGGCATCTAATGGTAACAATTTCTTTTTGTACTTAAACATTTGTCAACTTAAAATCAGTTTCTACTATAGGATGAAGAGACTCCTCATCTTCGCCAGCCTATTAAGCATCACCCTTTGCTTCCCGGTGGGTTCACCTTTACAGAAGAGAGAAAGACGCAGACGTCAGCTGGGTTTTGGTTATGGATACGGGCATGGGCAGGCTTATCCGTTCTATGTTCCCTTCTTCCAGCCTGGCCTTAACGATGATTTCACTCCTGAAATTTACATTGATCACAGCAGACCTTCCATTCCCAAGCCAGTGGCTCCCAGGCCTGCCGTGACCTCCCTGCCACGCCGGACAACATCAAAGGTGCCAATTACTGGCGATGACCCCTGCTCTCCACCAAGAGTTGACGATTTAAACGGCGATCATCTGCCGGTTCTCATTTATGTTGACCCCAAGGAGTGGAGCTCGATAAGTGGGAACCAACCCTTTTCACCCGGTCAGTCCAGCGATCTTCAGCCAGCCTTGGCCATTGTCCCGGGCCTTTTCCTCCCCGCATCCGAGGGTAGCCAAGTAACACAAAGTCCCTTTCGAGATACCCACGGGCTAAAAGCTCCAGACTCGATAAGGGTCCCTGAATCTCACAGAAAAGATTGTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240769.1 True 690 mRNA 0.49 2 398419 399683

Neighbor

gene id symbol gene type direction distance location
LOC122345880 NA coding downstream 25601 371671 ~ 372818 (-)
adamts12 LOC107725168,LOC107704241,LOC107594580,LOC107750303,LOC107658289,LOC107567650 coding downstream 58688 316841 ~ 339731 (-)
fgf10b fgf10,LOC107705049,LOC107725110,LOC107594591,LOC107658296,LOC107567653 coding downstream 85391 301638 ~ 313028 (-)
mybbp1a mybbp1a,LOC107658206,LOC107704885,LOC107594578,LOC107567654,LOC107750298 coding downstream 99038 287133 ~ 299381 (-)
paip1 paip1,LOC107725119,LOC107704219,LOC107658232,LOC107567649 coding downstream 112121 278951 ~ 286298 (-)
lrp13 LOC107725159,LOC107594583,LOC107704910 coding upstream 309 399992 ~ 411093 (-)
gak gak,LOC107704343,LOC107667379 coding upstream 87361 487044 ~ 511879 (-)
sh2b3 sh2b3,LOC107594562,LOC107550292,LOC107704923 coding upstream 113749 513432 ~ 549044 (-)
pheta1 LOC107653115,LOC107725116,LOC107594559,LOC107550295,LOC107723306,LOC107687307 coding upstream 150118 549801 ~ 555622 (-)
ier3 LOC107723299,LOC107667686,LOC107653130,LOC107567455,LOC107751423,LOC107550277 coding upstream 193820 593503 ~ 594649 (-)
G32150 NA non-coding downstream 46340 350967 ~ 352079 (-)
G32086 NA non-coding downstream 193883 162490 ~ 204536 (-)
G32102 NA non-coding downstream 372527 25514 ~ 25892 (-)
G32100 NA non-coding downstream 380904 16470 ~ 17515 (-)
G32099 NA non-coding downstream 383114 12703 ~ 15305 (-)
G32177 NA non-coding upstream 31947 431630 ~ 431890 (-)
G32186 NA non-coding upstream 56434 456117 ~ 482271 (-)
G32187 ugt2b3,ugt2b1,LOC107667397,LOC107725113,LOC107667542,LOC107723313 non-coding upstream 58797 458480 ~ 479881 (-)
G32191 NA non-coding upstream 65381 465064 ~ 470468 (-)
G32194 LOC107667397,LOC107723313,LOC107572263,LOC107725113 non-coding upstream 66352 466035 ~ 471546 (-)
kcnv2b atp5ib,atp5i,atp5ia,kcnv2b,LOC107703581,LOC107725101,LOC107704252,LOC107594594,LOC107723293 other downstream 10541 382052 ~ 387878 (-)
rictora rictora,LOC107704198,LOC107658248,LOC107567655,LOC107750288,LOC107594576,LOC107725140 other downstream 136748 239951 ~ 261671 (-)
G32104 LOC107725162,LOC107594575 other downstream 362071 35777 ~ 36348 (-)
G32103 LOC107725162,LOC107704185,LOC107594575 other downstream 363702 33779 ~ 34717 (-)
G32101 LOC107594575,LOC107725162,LOC107704185 other downstream 374470 20139 ~ 23949 (-)
ddr2l ddr2l,LOC107704361,LOC107725118,LOC107550294,LOC107723312,LOC107667359,LOC108444179 other upstream 156971 556654 ~ 583095 (-)
wdr31 wdr31,si:ch73-266o15.4,LOC107653158,LOC107667323,LOC107751417 other upstream 222831 622514 ~ 631126 (-)
castor1 gatsl3,LOC107755828,LOC107726730,LOC107704487 other upstream 912921 1312604 ~ 1336187 (-)
lrrc74b lrrc74b,LOC107755819,LOC107667596,LOC107599620 other upstream 942923 1342606 ~ 1354414 (-)
ypel1 ypel1,YPEL1,ypelc,ypel2b,LOC103374080,LOC106586007 other upstream 1273341 1673024 ~ 1694286 (-)

Expression


Co-expression Network