tango2 (tango2,LOC107673391,LOC107595038)


Basic Information

Item Value
gene id tango2
gene name tango2,LOC107673391,LOC107595038
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 9843314 ~ 9861374 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240806.1
CCGGACGTCTCTGTAGACGTCAATGCGATGTTGGTTTAGCCCTTTGTACAGTATTAGCCTGTGCTCTAAGTTGCTTCTCACAGTAGCGGTAGAATGAATTGTAATCACTGACAACACATGGAACCCACATAGCACATCCCagctctgacctctgacctcactGTGATTGAAAACTCCTGCCATCAGTAACCTCCTCATGTGCATCATCTTCTTGAAGTTTGACCCTCGGCCTGCATCCAAAAATGCCTACAGgcTTATTCTGGCTGCTAACAGAGATGAGGTCTACAGCAGACCGTCCAAAGCTGCAGACTTCTGGGGCAGCAGCAATGAGATCCTTAGTGGTCTGGACCTGGAAGAGGGAAAGGAAGGTGGATCGTGGCTGGGAATTAGCAAACGAGGGAAACTGGCGGCACTGACCAATTACCTGGAAGCACGGCAAAATCCAGATGCTCAGGGGAGAGGTTTCCTGGTGTCCAACTATTTGACGGATAACTTGGACAGTTTCGCATACCTCCGCAAAGTGTCTTCAGAAGCTCATTTATATAATGGCTTCAATCTCCTTACTGCTGACTTCAGGGCCAATGAAGACACATTGTGTTACTATGGAAACAAGGGCAGTTCAGAGCCCATTCATCTCAAAGCAGcaGGAATCTATGGGTTGAGTAACTCTCTTCTGGAAACTCCGTGGAGAAAGCTGCTGCACGGCAAACAGCTGTTCACCAGTGTAGTGAACAAAACACTGCCCCCTGATGGCTTAGTGCAGGAACTGCTCCATATCCTCAATAACGAGGAGCTAAACACCCCGGACCCCACGCAGGAGAGTCAAGGTGTAGGCTTCAGCAAGGCCATGCTCCAAGCCCTGTCTGCAGTGTGTGTGCGCTCACCAGGATACGGCACAAGGACCAATACAGTCATCCTCATCGACCGAGACGGAAACGTGAGCTTTACTGAACGCACCATGCTGAACTGTGACATCAGCCAGTGGAGCACAAATAGCTTCCAGTTCAGACTGCAAGAATGAGAGCCAGATGCCAGGCCAAGAGAAGAAGACTCTCACGTTGTGCCTTTATCCAGCCACTGTCTGCTCAAGCCACGCAGCACCCCAGTTACATGAACATCAAATCTTATTTCAGACTTTCCTGTTGAAAGCGGTTATTAATTGTCACAGCTCTGTTCTGAGAGGAAGCTTGATTGcactttcttatttttaaggTATTTCTTCTTTCTAATAACTAGGGGTTCATGAGGAGGCCTGAATCTACTCATGAGATGTGATTTTTCGGTGCATGTCATTCACTCTGCATATGAAGAATGTAAAACGTTATCATCTACTGAAACCCATTTTATCACAAACTGTCATCGGTATGAAATGCCGTCGGACAGAATAGTTTTAGGAGCAAGATGTCTACTGCCAAAGAATAATTGTCAGTCATTTGTGagaacaagaaaataaaacattttcataatctTGCACAATGTAAACTTTA
>XM_043240807.1
CCGGACGTCTCTGTAGACGTCAATGCGATGTTGGTTTAGCCCTTTGTACAGTATTAGCCTGTGCTCTAAGTTGCTTCTCACAGTAGCGGTAGAATGAATTGTAATCACTGACAACACATGGAACCCACATAGCACATCCCagctctgacctctgacctcactGTGATTGAAAACTCCTGCCATCAGTAACCTCCTCATGTGCATCATCTTCTTGAAGTTTGACCCTCGGCCTGCATCCAAAAATGCCTACAGgcTTATTCTGGCTGCTAACAGAGATGAGGTCTACAGCAGACCGTCCAAAGCTGCAGACTTCTGGGGCAGCAGCAATGAGATCCTTAGTGGTCTGGACCTGGAAGAGGGAAAGGAAGGTGGATCGTGGCTGGGAATTAGCAAACGAGGGAAACTGGCGGCACTGACCAATTACCTGGAAGCACGGCAAAATCCAGATGCTCAGGGGAGAGGTTTCCTGGTGTCCAACTATTTGACGGATAACTTGGACAGTTTCGCATACCTCCGCAAAGTGTCTTCAGAAGCTCATTTATATAATGGCTTCAATCTCCTTACTGCTGACTTCAGGGCCAATGAAGACACATTGTGTTACTATGGAAACAAGGGCAGTTCAGAGCCCATTCATCTCAAAGCAGGAATCTATGGGTTGAGTAACTCTCTTCTGGAAACTCCGTGGAGAAAGCTGCTGCACGGCAAACAGCTGTTCACCAGTGTAGTGAACAAAACACTGCCCCCTGATGGCTTAGTGCAGGAACTGCTCCATATCCTCAATAACGAGGAGCTAAACACCCCGGACCCCACGCAGGAGAGTCAAGGTGTAGGCTTCAGCAAGGCCATGCTCCAAGCCCTGTCTGCAGTGTGTGTGCGCTCACCAGGATACGGCACAAGGACCAATACAGTCATCCTCATCGACCGAGACGGAAACGTGAGCTTTACTGAACGCACCATGCTGAACTGTGACATCAGCCAGTGGAGCACAAATAGCTTCCAGTTCAGACTGCAAGAATGAGAGCCAGATGCCAGGCCAAGAGAAGAAGACTCTCACGTTGTGCCTTTATCCAGCCACTGTCTGCTCAAGCCACGCAGCACCCCAGTTACATGAACATCAAATCTTATTTCAGACTTTCCTGTTGAAAGCGGTTATTAATTGTCACAGCTCTGTTCTGAGAGGAAGCTTGATTGcactttcttatttttaaggTATTTCTTCTTTCTAATAACTAGGGGTTCATGAGGAGGCCTGAATCTACTCATGAGATGTGATTTTTCGGTGCATGTCATTCACTCTGCATATGAAGAATGTAAAACGTTATCATCTACTGAAACCCATTTTATCACAAACTGTCATCGGTATGAAATGCCGTCGGACAGAATAGTTTTAGGAGCAAGATGTCTACTGCCAAAGAATAATTGTCAGTCATTTGTGagaacaagaaaataaaacattttcataatctTGCACAATGTAAACTTTA

Function

symbol description
tango2 Predicted to be involved in Golgi organization and protein secretion. Predicted to be active in Golgi apparatus. Orthologous to human TANGO2 (transport and golgi organization 2 homolog).

NR:

description
PREDICTED: transport and Golgi organization protein 2 homolog isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240806.1 True 1487 mRNA 0.46 9 9843314 9861374
XM_043240807.1 False 1484 mRNA 0.46 9 9843314 9861374

Neighbor

gene id symbol gene type direction distance location
tmem150aa tmem150aa,LOC107750168,LOC107672765,LOC107673390,LOC107709874 coding downstream 2235 9831999 ~ 9841079 (-)
si:ch211-102c2.8 LOC107595037,LOC107709829 coding downstream 14274 9816868 ~ 9829040 (-)
tcn2 tcn2,LOC107595007,LOC107709872,LOC107673413,LOC107672782,LOC107750173,LOC107592334 coding downstream 30184 9808869 ~ 9813130 (-)
rabl6b rabl6b,rabl6,LOC107750171,LOC107672784,LOC107673384,LOC107709868 coding downstream 34941 9798294 ~ 9808373 (-)
imp4 imp4,LOC107595005,LOC107709870,LOC107750176,LOC107592341,LOC107672800 coding downstream 47281 9792187 ~ 9796033 (-)
naaladl1 naaladl1,si:ch211-214j8.1,LOC107595014 coding upstream 167100 10028474 ~ 10034404 (-)
gtf2h2 gtf2h2,gtf2h2c,LOC107672775,LOC107595044,LOC107592329,LOC107752507,LOC103032811,LOC102292669 coding upstream 181160 10042534 ~ 10046774 (-)
oclnb ocln,oclnb,LOC107673430,LOC107595017,LOC107752508,LOC107592328,LOC107672774 coding upstream 185524 10046898 ~ 10052562 (-)
marveld2b marveld2b,LOC107673429,LOC107595015,LOC107744415,LOC107672714,LOC107592409,LOC107752498 coding upstream 192605 10053979 ~ 10058774 (-)
ak6 ak6,LOC107595020,LOC107592327 coding upstream 197535 10058909 ~ 10060421 (-)
G34877 NA non-coding downstream 65076 9777633 ~ 9778238 (-)
G34871 NA non-coding downstream 76707 9766268 ~ 9766607 (-)
G34869 NA non-coding downstream 78782 9764073 ~ 9764532 (-)
G34704 NA non-coding downstream 595273 9246920 ~ 9248041 (-)
G34594 NA non-coding downstream 782500 9013306 ~ 9060814 (-)
G35035 NA non-coding upstream 420035 10281409 ~ 10296141 (-)
G35047 NA non-coding upstream 476373 10337747 ~ 10341167 (-)
G35107 NA non-coding upstream 517392 10378766 ~ 10378998 (-)
G35139 abca2,LOC107672707,LOC107730718 non-coding upstream 651556 10512930 ~ 10513285 (-)
G35142 NA non-coding upstream 655297 10516671 ~ 10517342 (-)
G34789 vps37b,LOC107594993,LOC107673398,LOC107656485,LOC107587312,LOC107709855,LOC107721558 other downstream 440691 9337828 ~ 9402623 (-)
vamp5 LOC107594989,LOC107681225 other downstream 622786 9215498 ~ 9220528 (-)
G34580 LOC107681240,LOC107709820,LOC107560234,LOC107715750 other downstream 913261 8929470 ~ 8930053 (-)
LOC122345093 NA other downstream 1165596 8674229 ~ 8677718 (-)
timm8b timm8b,LOC107717885,LOC107598437 other downstream 1411728 8429700 ~ 8431586 (-)
si:dkey-96l17.6 si:dkey-96l17.6,LOC107672751,LOC107738297,LOC107592400,LOC107744487,LOC108434467,LOC105902719 other upstream 463585 10324959 ~ 10335343 (-)
G35122 NA other upstream 599834 10461208 ~ 10461709 (-)
G35371 znf703,LOC107599934,LOC107672788,LOC107744445,LOC107687685,LOC107726392,LOC107592299 other upstream 1006990 10868364 ~ 10874064 (-)
G35384 NA other upstream 1062553 10923927 ~ 10926163 (-)
slc25a15b slc25a15b,LOC107744499,LOC107687678,LOC107599942,LOC107726376,LOC107672737 other upstream 1098937 10960311 ~ 10969118 (-)

Expression


Co-expression Network