kremen1 (kremen1,LOC107656811,LOC107561268,LOC107560966,LOC107702222)


Basic Information

Item Value
gene id kremen1
gene name kremen1,LOC107656811,LOC107561268,LOC107560966,LOC107702222
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 3753979 ~ 3809696 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240847.1
GCACGGGGCAGGTTGAATCTATTGCCCCGATTTCCTGTCACATGGTTTGAAATAGGATCCCTAGTTTTTCTGCTATCTGTCTTGAGCGTGAGTGTCTGGGGGCAGCGCTGATCTGCCCAGAAAGTCGAGACGCTCTTAACGCAGACGCGCCGCGCGATTCGCCGACACTCGTCTTGCTCGCCGCACCAGACCGGACTCGGAACGCTTCACCTgcgaggagagagaggaagagaaggtGTCCAGATCCCTCACAGCCCGCCACGGAAGAGCGATGGACTCGTGGAGAGCCGCGGCTCTGCTCCTCGCCGCCTGTCTCGGCGCGTCGGCTTCGGAGCAGTTCCACACGGAGTGTTACACGGCGAACGGAGAGGACTACAGGGGTCGACAGAACCAGACGAGCCTGGAAGGAGGAAGACCGTGCCTCTTCTGGAACGAGACTTTCCAGCATCCGTACAACACCATCAAATACCCCAACGGAGAAGGAGGCCTTGGGCCGCACAACTTCTGCAGGAACCCAGACGGAGATGTTCGGCCGTGGTGTTATATCGCAGATCTCGAGGACGGAATCTACTGGAAATACTGTGATATCCCGAGCTGCCAAATGCCTGGTAACCTGGGCTGTTTTAAGGACAGCGGCGATCCAACACCTCTATCCGGAGGCTACCAGACCTCCAACAAGCTCACCATTCAGAACTGCATCAGCTTCTGCAGAAACCAAAGATACAAGCTCGCCGGTTTGGAATCAGGCTATGCTTGTTTCTGTGGCAACGACATCGATTACCATCGTCACGGTGACGCTCCGAGCACAGAGTGTAACCATGTGTGTTTTGGAGATCATACTCAGCCATGCGGAGGCGACGGACGGGTCATAGTCTTCGACACAAAAGTAGGCGCTTGCGGAGGAAACTACACGTCGCCCTCCGCAGTCATCTACTCTCCTGACTTCCCGGACAAATACAAATCTGGCAGGGTCTGCTACTGGACCATTCAGGTTCCAGGTGCTTCTGTCATTCTCTTCAACTTTACTTTCTTCAATATCGTGGATCAGACGGACATGGTGGAGCTGCTGAACGGTTACTCCAATCAGGTGCTGGCGCGGTTCGATGGGCGCAATCCACCGCGGGACATCGTGAACGTCACCGCGGACTTcgtcattttgtatttttactctGACCGGACGAATGAGGCGCAAGGATTTTCTGTTCTTTATCATGCTTTCAGAAATCAAGCCGTCACGCCTCTGGAGGAAGACGATGATGGCGATGAAGGGGACGGCAGCACGGTGCGGCCGAATGCGGGAAGCACCACCGCAAAATCGAACACCAGTCAGAACGGAAAGTCCTCCCTCCGGTACTATGTAATCACATCGAGTCCTGCAAACATGCCAGGTCAGTGGCATGAACCGGGCCGGACCCCGGACCACAGCACCATGTGGACCATCTACGCATTAGCCGCTCTGCTAACGCTAACAGTCATAGCCATGGTGGCTAAGCTGCTCTTGCATCTTACTGTAAAATCCCCGTCCATCCCGACGATCAGCGGGGCGGATTCGTGCGCGCAGAGCACCGCGTCCGAACCCTGGATCATCTTCTACAGACCTTCCACCATCTCTCTGTTCAAGAAGAAACTCAAGAACCACCACGGAGACCTCAGCCCTCTCGTGGGGAACTAACCTCGCCGACCTCGGACCTCTACGGCTGCTTTAGCCCCTAAAGGATGCACACACTGTATGTAAGCAATgctggtcttctgctgctggaTCTGATCCACTCCTAATTCACTTCAAAGCGACCAGCGCAGGGCCCACAGCCCGATGGGTTGTTGGTAAGAAACTGCGCAAAAAGAGCTCGCGCTTGCTCTCGATTTGCATCGTAACCAATCACCGATCATGTGACAGGTGCACACATGCACCGAGCCATTTGATTAGCAAAAGAGTGCCGGGATGCTTCCGAAACGAATACGGATAGTCGTTTGTGTAGGCGCTTTCACAGAAGCGATCTGCCGATAACGTCCGCATTAGAGACTCTCGGCGGAGCGCACTGAAAGACAAAACCACTCACGTAACCAAAATAATGCCACGGTACCCAAGGAGATACCATTCTTTTTAACCTCTAATGTAGGTCACCTGTTGTTGAGGAGCACAGAGCTCCTTTCTTCAGATGTAAGAGAGCTGGCTGAACCGGCGGAGGATTGATGTCACAATCATGTCGAGAGCAATTCGGACTCAAACGAGACAgtctcgagagagagagagagagagagagagaggtggacgGAGTCTGAAATTGCTACGAGTTGGGCGATGTTCAAAACCGGCTGACATCCCCGCGGACCTCGCTTTCGTCTCTTGTCGTTTGTGTTGGGTTTTGATCTTTCCGCATTGCCTTTAAGTGCCTTCAGGActgaaacgaaaaaaaaaaatagaaactctTTTGTCTGTCTTCTAAGCTGTCACAACGTCTCGATGATGTAAACAAGCATTGATCCTTCGGAGCATTGAATTGCAAATGAGAATAAGCACTaaggatgtgtttttttttgttggtttttttattCTAGAGATAAATGTAGTCCTGTGGGTGTCATTGGGCTTATTGTTCTTGTCAGGTTTTCGACTTGAGCAAGAGAAGCATTGTGATGAACGTTGTGTAATTCTGTGTGGGAACAATCAAACGTCATCCCTTTTCATTTCGCTCTCCGACAGAGGCAGTGGTGAAATTCTTCCCAAAACAATTTGCTCTTTCTCCCCCTTCACCACAGCTCGAGCTTTCGCATTCTGAGGCACTTTTCCAGCCGGCGGAAAACCATGAGGATCACTGCACTGCTAGCTGCGAGGATTCGGGGCGCTTGCTAAAAACCGGAAAGGGCCAAAAAGACGGCATTTACTCCTGACGCGcttgaaatgcaaaataagatattttgaagaatggttAACTTTATCCACACACGTCAccgaaagagaaaaaaacaaacactgtgcCTCATtcatgaaatttttttttgtgtgtgtgcgtgtaagcTCATAAAACCGCTCTGACGCGTTCCCAAAAGTGcttgtattttcaaaatgttaattactaTAAAAAATCCTGCTCCCAAGCATgcataaaaaatgaacattagtTTCCAGCGTGTTAACGATGATTCCGGAAGACTTTACTAAATTAgttgtaaatgataaaaataagtgCTTTACAGACAAAGCGTAAGCCtagttctaaataaaataaaataacttgcactgactgatcttaaaacatgtcagctCCTATGTTTTGTCTTAAGAAGCTTGCTTAtatcctaattgaactatgccCTAATCCCTATGAAACCCGGccttatacaattaaaaattaaaacaaacataagcaCATGACAGCACTTcactttatgtataatgcatacaatgcatataaataataaatgcatgggGTAACAATTAATTGCTAAGTGCTGTAATGTATTAACTATGTttacaattattcatgagattgtactaaaatgacttttatattgcattatatataaaagctttaaGTGTTACCACACATTTATACAATAGAGAGAGTTATTAGTCTCTTATTGGTCTGattaaccaaaaacaaacctgGAATTGAATGAAATATTACGCAGACCCTTCATATTTGGTTTGGTAAAAGCTTTTATGCATGTTTGACTGAGGTTTTTTCTGCATTGACACCAGCAGGCGTCACCAGATTTCGTTTTTTCGAGCTCTGAAATCATTTTGAACCATCACTAGCTGACTtacatgttttactgtttatctGAGGTTTACAGTGCGTTTCTGAATTCTGTGTAGAGTTTATGGAAATGTCCATTTTGCATGCGAACGACCGTTTATGAACGAGGCCCATTGCAcactaaacagaaaaaaaagtgagtaaatgatgacagaaattgcAGTTCACAGCACTCAGACACAGGCCGACCGTTTTATATTCAGTTCTGGGTGTAGTACTTCACGTAGGTTTtagtaatattgcaaaaaaccttcatttaaaaggacattCACTTGCCGTGTTGGCGGGTACGTCAATAATGCCACACTTACTGTCCAAAGCGATTTAACATTAACTACATGATGCACTTTATCACTGAAGTACTTATCCTGCGTGATGTTTTATGCACGGCCAAAAGCATTATAAGTTTATATCTCAGATTGCATCGATATATCGCATATATCGAAACAAATCCGTATCAGTCGAGCCAATTCGAGCGCAAATACCTAGTTTTTCTTTCCTCAATCCGAACTCTTTTGTCTGTATTTTGGTCTGCGGCCTGTTAATTATTGCATACTCCTTCGTACCCTTAGCTCTGCGGTGCCCGCGGCTGCCCATGCATACTAAAGTGTCACCGGTCACAGAAAGAGGGAGACAAACCCAAAGTGACAGGTTAAATCTAACAAGGTCATATTCGTCTGGAAAGGCTGGTGAATAATGCAGAAACCAGGCGTCCATTTAGATCGCAAAGCTCAAATGCCATAGCACTTTTACCGGTGGAAAAAGTGTTATATCCTTCTGCGGTCTATCACCATGTCAGCGGGCTTTCCTTCGGAGAATCCGAGATAGGAATCCCTCCACTTTTTGCGAAAGGGTGCTTCCAGggattataaaaaaagatgttgttttcatttaattgtacataaaatagtgaaaattttaatttatgccataaattattgttattttggatgtaaaatGGGATATAATCTATCTTTTGTACAAGTAcctttgtagtttttatttaatgtgtcccgagtgcaaaaataaatatgcatgtttcTTA
>XM_043240848.1
ACGCACGGGGCAGGTTGAATCTATTGCCCCGATTTCCTGTCACATGGTTTGAAATAGGATCCCTAGTTTTTCTGCTATCTGTCTTGAGCGTGAGTGTCTGGGGGCAGCGCTGATCTGCCCAGAAAGTCGAGACGCTCTTAACGCAGACGCGCCGCGCGATTCGCCGACACTCGTCTTGCTCGCCGCACCAGACCGGACTCGGAACGCTTCACCTgcgaggagagagaggaagagaaggtGTCCAGATCCCTCACAGCCCGCCACGGAAGAGCGATGGACTCGTGGAGAGCCGCGGCTCTGCTCCTCGCCGCCTGTCTCGGCGCGTCGGCTTCGGAGCAGTTCCACACGGAGTGTTACACGGCGAACGGAGAGGACTACAGGGGTCGACAGAACCAGACGAGCCTGGAAGGAGGAAGACCGTGCCTCTTCTGGAACGAGACTTTCCAGCATCCGTACAACACCATCAAATACCCCAACGGAGAAGGAGGCCTTGGGCCGCACAACTTCTGCAGGAACCCAGACGGAGATGTTCGGCCGTGGTGTTATATCGCAGATCTCGAGGACGGAATCTACTGGAAATACTGTGATATCCCGAGCTGCCAAATGCCTGGTAACCTGGGCTGTTTTAAGGACAGCGGCGATCCAACACCTCTATCCGGAGGCTACCAGACCTCCAACAAGCTCACCATTCAGAACTGCATCAGCTTCTGCAGAAACCAAAGATACAAGCTCGCCGGTTTGGAATCAGGCTATGCTTGTTTCTGTGGCAACGACATCGATTACCATCGTCACGGTGACGCTCCGAGCACAGAGTGTAACCATGTGTGTTTTGGAGATCATACTCAGCCATGCGGAGGCGACGGACGGGTCATAGTCTTCGACACAAAAGTAGGCGCTTGCGGAGGAAACTACACGTCGCCCTCCGCAGTCATCTACTCTCCTGACTTCCCGGACAAATACAAATCTGGCAGGGTCTGCTACTGGACCATTCAGGTTCCAGGTGCTTCTGTCATTCTCTTCAACTTTACTTTCTTCAATATCGTGGATCAGACGGACATGGTGGAGCTGCTGAACGGTTACTCCAATCAGGTGCTGGCGCGGTTCGATGGGCGCAATCCACCGCGGGACATCGTGAACGTCACCGCGGACTTcgtcattttgtatttttactctGACCGGACGAATGAGGCGCAAGGATTTTCTGTTCTTTATCATGCTTTCAGAAATCAAGCCGTCACGCCTCTGGAGGAAGACGATGATGGCGATGAAGGGGACGGCAGCACGGTGCGGCCGAATGCGGGAAGCACCACCGCAAAATCGAACACCAGTCAGAACGGAAAGTCCTCCCTCCGGTACTATGTAATCACATCGAGTCCTGCAAACATGCCAGTGTGGACCATCTACGCATTAGCCGCTCTGCTAACGCTAACAGTCATAGCCATGGTGGCTAAGCTGCTCTTGCATCTTACTGTAAAATCCCCGTCCATCCCGACGATCAGCGGGGCGGATTCGTGCGCGCAGAGCACCGCGTCCGAACCCTGGATCATCTTCTACAGACCTTCCACCATCTCTCTGTTCAAGAAGAAACTCAAGAACCACCACGGAGACCTCAGCCCTCTCGTGGGGAACTAACCTCGCCGACCTCGGACCTCTACGGCTGCTTTAGCCCCTAAAGGATGCACACACTGTATGTAAGCAATgctggtcttctgctgctggaTCTGATCCACTCCTAATTCACTTCAAAGCGACCAGCGCAGGGCCCACAGCCCGATGGGTTGTTGGTAAGAAACTGCGCAAAAAGAGCTCGCGCTTGCTCTCGATTTGCATCGTAACCAATCACCGATCATGTGACAGGTGCACACATGCACCGAGCCATTTGATTAGCAAAAGAGTGCCGGGATGCTTCCGAAACGAATACGGATAGTCGTTTGTGTAGGCGCTTTCACAGAAGCGATCTGCCGATAACGTCCGCATTAGAGACTCTCGGCGGAGCGCACTGAAAGACAAAACCACTCACGTAACCAAAATAATGCCACGGTACCCAAGGAGATACCATTCTTTTTAACCTCTAATGTAGGTCACCTGTTGTTGAGGAGCACAGAGCTCCTTTCTTCAGATGTAAGAGAGCTGGCTGAACCGGCGGAGGATTGATGTCACAATCATGTCGAGAGCAATTCGGACTCAAACGAGACAgtctcgagagagagagagagagagagagagaggtggacgGAGTCTGAAATTGCTACGAGTTGGGCGATGTTCAAAACCGGCTGACATCCCCGCGGACCTCGCTTTCGTCTCTTGTCGTTTGTGTTGGGTTTTGATCTTTCCGCATTGCCTTTAAGTGCCTTCAGGActgaaacgaaaaaaaaaaatagaaactctTTTGTCTGTCTTCTAAGCTGTCACAACGTCTCGATGATGTAAACAAGCATTGATCCTTCGGAGCATTGAATTGCAAATGAGAATAAGCACTaaggatgtgtttttttttgttggtttttttattCTAGAGATAAATGTAGTCCTGTGGGTGTCATTGGGCTTATTGTTCTTGTCAGGTTTTCGACTTGAGCAAGAGAAGCATTGTGATGAACGTTGTGTAATTCTGTGTGGGAACAATCAAACGTCATCCCTTTTCATTTCGCTCTCCGACAGAGGCAGTGGTGAAATTCTTCCCAAAACAATTTGCTCTTTCTCCCCCTTCACCACAGCTCGAGCTTTCGCATTCTGAGGCACTTTTCCAGCCGGCGGAAAACCATGAGGATCACTGCACTGCTAGCTGCGAGGATTCGGGGCGCTTGCTAAAAACCGGAAAGGGCCAAAAAGACGGCATTTACTCCTGACGCGcttgaaatgcaaaataagatattttgaagaatggttAACTTTATCCACACACGTCAccgaaagagaaaaaaacaaacactgtgcCTCATtcatgaaatttttttttgtgtgtgtgcgtgtaagcTCATAAAACCGCTCTGACGCGTTCCCAAAAGTGcttgtattttcaaaatgttaattactaTAAAAAATCCTGCTCCCAAGCATgcataaaaaatgaacattagtTTCCAGCGTGTTAACGATGATTCCGGAAGACTTTACTAAATTAgttgtaaatgataaaaataagtgCTTTACAGACAAAGCGTAAGCCtagttctaaataaaataaaataacttgcactgactgatcttaaaacatgtcagctCCTATGTTTTGTCTTAAGAAGCTTGCTTAtatcctaattgaactatgccCTAATCCCTATGAAACCCGGccttatacaattaaaaattaaaacaaacataagcaCATGACAGCACTTcactttatgtataatgcatacaatgcatataaataataaatgcatgggGTAACAATTAATTGCTAAGTGCTGTAATGTATTAACTATGTttacaattattcatgagattgtactaaaatgacttttatattgcattatatataaaagctttaaGTGTTACCACACATTTATACAATAGAGAGAGTTATTAGTCTCTTATTGGTCTGattaaccaaaaacaaacctgGAATTGAATGAAATATTACGCAGACCCTTCATATTTGGTTTGGTAAAAGCTTTTATGCATGTTTGACTGAGGTTTTTTCTGCATTGACACCAGCAGGCGTCACCAGATTTCGTTTTTTCGAGCTCTGAAATCATTTTGAACCATCACTAGCTGACTtacatgttttactgtttatctGAGGTTTACAGTGCGTTTCTGAATTCTGTGTAGAGTTTATGGAAATGTCCATTTTGCATGCGAACGACCGTTTATGAACGAGGCCCATTGCAcactaaacagaaaaaaaagtgagtaaatgatgacagaaattgcAGTTCACAGCACTCAGACACAGGCCGACCGTTTTATATTCAGTTCTGGGTGTAGTACTTCACGTAGGTTTtagtaatattgcaaaaaaccttcatttaaaaggacattCACTTGCCGTGTTGGCGGGTACGTCAATAATGCCACACTTACTGTCCAAAGCGATTTAACATTAACTACATGATGCACTTTATCACTGAAGTACTTATCCTGCGTGATGTTTTATGCACGGCCAAAAGCATTATAAGTTTATATCTCAGATTGCATCGATATATCGCATATATCGAAACAAATCCGTATCAGTCGAGCCAATTCGAGCGCAAATACCTAGTTTTTCTTTCCTCAATCCGAACTCTTTTGTCTGTATTTTGGTCTGCGGCCTGTTAATTATTGCATACTCCTTCGTACCCTTAGCTCTGCGGTGCCCGCGGCTGCCCATGCATACTAAAGTGTCACCGGTCACAGAAAGAGGGAGACAAACCCAAAGTGACAGGTTAAATCTAACAAGGTCATATTCGTCTGGAAAGGCTGGTGAATAATGCAGAAACCAGGCGTCCATTTAGATCGCAAAGCTCAAATGCCATAGCACTTTTACCGGTGGAAAAAGTGTTATATCCTTCTGCGGTCTATCACCATGTCAGCGGGCTTTCCTTCGGAGAATCCGAGATAGGAATCCCTCCACTTTTTGCGAAAGGGTGCTTCCAGggattataaaaaaagatgttgttttcatttaattgtacataaaatagtgaaaattttaatttatgccataaattattgttattttggatgtaaaatGGGATATAATCTATCTTTTGTACAAGTAcctttgtagtttttatttaatgtgtcccgagtgcaaaaataaatatgcatgtttcTTA

Function

symbol description
kremen1 Predicted to enable metal ion binding activity and transferase activity. Acts upstream of or within angiogenesis; lateral line development; and liver development. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Is expressed in lens; midbrain hindbrain boundary; otic vesicle; posterior lateral line primordium; and ventral fin fold. Human ortholog(s) of this gene implicated in ectodermal dysplasia 13. Orthologous to several human genes including KREMEN1 (kringle containing transmembrane protein 1).

NR:

description
kremen protein 1-like isoform X2

GO:

id name namespace
GO:0001525 angiogenesis biological_process

KEGG:

id description
K23091 KREMEN; kremen protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240847.1 True 4806 mRNA 0.46 10 3753979 3809694
XM_043240848.1 False 4766 mRNA 0.46 10 3753979 3809696

Neighbor

gene id symbol gene type direction distance location
xbp1 xbp1 coding downstream 91069 3659704 ~ 3662910 (-)
si:dkey-1k23.3 LOC107560961,LOC107656799,LOC107702214,LOC107755870 coding downstream 131575 3619178 ~ 3622404 (-)
taok3a taok3,taok3a,LOC107699916,LOC107697236,LOC107708246 coding downstream 259786 3422884 ~ 3494193 (-)
txnrd2.2 txnrd2 coding downstream 336238 3390994 ~ 3417741 (-)
gnb1l gnb1l,LOC107708243,LOC107755863,LOC107551810 coding downstream 377453 3343559 ~ 3376526 (-)
susd2 LOC107656804,LOC107561267,LOC107702221,LOC107707826,LOC107560963 coding upstream 12422 3822118 ~ 3847170 (-)
slc39a14 slc39a14,LOC107656812,LOC107560970,LOC107561269,LOC107702220,LOC107707824 coding upstream 39797 3849493 ~ 3873889 (-)
LOC122345410 hspb8,LOC107720866,LOC107561261 coding upstream 327835 4137531 ~ 4141903 (-)
LOC122345409 htr7c,LOC107561270,LOC107707833,LOC107656814,LOC107560967,LOC102292089 coding upstream 478103 4287799 ~ 4319735 (-)
LOC122346182 NA coding upstream 540531 4350227 ~ 4370478 (-)
G33124 NA non-coding downstream 101091 3648466 ~ 3652888 (-)
G33114 NA non-coding downstream 134925 3617937 ~ 3619054 (-)
G33008 NA non-coding downstream 363600 3388284 ~ 3390379 (-)
G32998 NA non-coding downstream 410739 3340599 ~ 3343240 (-)
G32999 NA non-coding downstream 426738 3293606 ~ 3327241 (-)
G33140 htr7c,LOC107755817,LOC107707833,LOC107656814,LOC107561270,LOC107702213,LOC107560967 non-coding upstream 88895 3898591 ~ 3904546 (-)
LOC122345413 NA non-coding upstream 158160 3967856 ~ 3968964 (-)
LOC122345411 NA non-coding upstream 241086 4050782 ~ 4051472 (-)
G33300 NA non-coding upstream 1050303 4859999 ~ 4902402 (-)
G33310 NA non-coding upstream 1104185 4913881 ~ 4915751 (-)
coq5 coq5,LOC107560969,LOC107707852,LOC107656810,LOC107561264,LOC107702223,LOC107707851,LOC107560965,LOC101158254,LOC107755815,LOC107561265 other downstream 1215 3744675 ~ 3752764 (-)
LOC122344624 LOC107699921,LOC107708239,LOC107755860,LOC107697241,LOC107551809 other downstream 741160 2935743 ~ 3012819 (-)
G32908 sema4c,LOC107697240,LOC107708238,LOC107699920 other downstream 793802 2951462 ~ 2960177 (-)
add2 add2,LOC107668755 other downstream 1148062 2586587 ~ 2605917 (-)
snrnp27 snrnp27 other downstream 1168527 2580548 ~ 2585452 (-)
piwil2 piwil2,LOC107560971,LOC107707823,LOC107702219 other upstream 68954 3878650 ~ 3898578 (-)
LOC122346168 srrm4,LOC107720865,LOC107702227,LOC107561260,LOC107656798 other upstream 335160 4144856 ~ 4193081 (-)
G33175 NA other upstream 812794 4622490 ~ 4623058 (-)
G33758 LOC107596916,LOC107710760,LOC107700938,LOC107587412,LOC107693817 other upstream 3014475 6824171 ~ 6826182 (-)
usp20 usp20,LOC107691016,LOC107693839,LOC107710745 other upstream 3113150 6922846 ~ 6943203 (-)

Expression


Co-expression Network