LOC122346175 (LOC107667871,LOC107707936,LOC107571030)


Basic Information

Item Value
gene id LOC122346175
gene name LOC107667871,LOC107707936,LOC107571030
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 76028 ~ 81063 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240864.1
AAAATGAAGAAGGATTCAAAAATTGTTCCGCGAGATCGTCAGATCATATGAGCAGACACAAACTGTGGGAGTCGGACGGCGCGCGCTTTCTCCTGCTTCATTTAATCTAGGTTTATATTGTAACTCGCATAAGAAACATCACTCCTGATCCTGCATCGccattaaagaaaatgaataatagcATTTCGAAATACTTTAAGAAAAAGCAGCCTGACAGTGACACGACAAGGGCGTCACAAACTGCTGACAATGCCCAGGAAGGAAATCATACaagcaagaaaaacaaaaaggggcCTGGTAATAATGACCGTGATCCATTAAAGGaaagaacaaacattttctgtacaAAGGACGGACAATCAAAAAGCCATCTGCAACAGAGTGCTGAAGGGCAAAGCAACACTTTTAATTTCTGCTACAAATCTGAGACTCATGCAGTGGTGTGTGATACATCCAAGACGGTGCTTGATGCTCTTAATACGAACAAGAATttcagaaagattaaaaaagacaacaaagggAAAGAAATAGTGATCCAGAGACGTGAAGGAGCAGTTCCTAGAGCAGCTGTGAAGACCGATTTCCCCTGCTGTCTCATTGGAAGAAATGAGCTCTTAGATATAACCTTCATCAAAAATAGtggaaatgttcatttaaagaaaacagctaAAAGACTTTCATTATCCAGTGAACCAAAACACTTTGTAatcttttacattaaaacaaaaggagGGAAGAAGGTGAGGTacttaatgaaaaacaatgagCTGAGGACGAAGGTTGAAGATGTTTGCGTGTACGCATTTAAAGAAGACAAACTGAAGGTTGCTTTGCGTCGTGACGGACGATTCACCAATGCCATATTTGAGAAACACTGTGTACTTTCTGAGTTTAGGGACAAAACCATCCATGATATGTCACACACTGTAGAGCATCTTGATGGAAAGCATTTTGAGATCATTGTTAGGAGTAACAACAACCAGCCAGATAGCCTAGAGGAGGTCTTCAGTGATGACAGTATTGAAATGGAGGAAGCTTCAGCTGCTGATGTAAAAGAAAGCGCTCAACCTAACCAGCATCCCATCAACACTGAACAagaagagacaaaacaaaagaaaaacacaatgaaatccAACAACGCCTCAACTAATTCTCCGAAAATAATTCCAGACTCTGAAGAGATTCTAGCAATTCTACGTGCTCAGTTTAAAGACTTACTGGAGACATTAAAGCAGCGAGAGAACCTGAAGAACAAATCTGATACCCTGAAGTTCTTCAGAGCAGAATATGATAAAAGCGTTCAGAGTTTCTCTGAGGTCAAGAAAGTGAAGCAGCTCATGAGACTCTCCGACTCTGTGTGTCAGATTCGAGTGGAGGGGTCCCCCAGAGGAACCGGCTTCTTACTCTTTGACCGATTTATCCTCACCAACGCTCATGTTATTGGAGAATTTGACCCTTTCACCAGGAAGCTTTCAAAGACCTTCACTGCAGTATTTGGTTATGAGGATTTGGACGCAAAGGAGGCCAAGTATATCCCGGTTAAGGAACATGTTGCAGCATACTATCATGGAAAGATCAACATGGACAGGTATCTTGACTTTGCTCTTCTTGAATTGAAAGACGTAGATGAAATCGCTGACTGTCCTGGACTGCTCAGCCGATACACTCATGCCCCCCCTCCTAACCGTGGTGGGATCTGCATTGTGGGACATCCAGGTGAAGGGGTCAAAAAAATGGACCCCTGCTTCATCATTGGGAAAGAGCACCTACAAGAGGCTGCACATAAACACATCTCTGAGAATGTCAACTTCATTCATGTGATGACACAACAGTCTTTGGCAGAGAAATGGGAAACGCATGACAACCAGTTCATGTATAACTCTTGTTTCTTTCATGGATCTTCTGGCTCTCCAGTTTTTGATGAAAACTGTTATCTGGTTGGCGTTCACACCGGTGGATATGCGTACAAAggagaaaactgtaaaactagGAGCATTATGGAATACTCGTATTCCATGCAGCCCGTCCTCGAAAGTATCATCGCACAGGCTAAGAAAAGTGGGAGAGCTGACATCTTAAAATTACTCTCtgaatataaaactttaaatccTAGCTTGAAAGATGATGATGTGGACATGGAAGAAGCTCCACAAAATCAAGAAGATGAACATGAATAATGGGAGAGTACCGATTGAGGCAACATCCATCTACAgaagtcaacatttgaagtggattaaAGCTGTCtttaagacaaaaacacattttggttttggtaCAACTTTGATTTAAAGGTTTTGATCTTCTTCAGATGTTGACTAgtgtatttgtttgaaatgcaaaactttcagatattaaaatattcaggGAAATTCACCAAAGTTTCATTCAATAACATAAAATCTGTATTTAGGTGAATGTCTCATTCCTTTTTATGGTtggtaatgatttatttttttcatttaactgtTAATCCGGTTCTCGTGTAACATATACATTCTATGTTTAATGTCATGGAGAA

Function

NR:

description
PREDICTED: protein FAM111A-like isoform X1

GO: NA

KEGG:

id description
K24274 FAM111A; protein FAM111A

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240864.1 True 2518 mRNA 0.40 6 76028 81063

Neighbor

gene id symbol gene type direction distance location
LOC122345224 spef2,LOC107704166,LOC107725157,LOC107573760 coding upstream 104275 185338 ~ 201609 (-)
lifra LOC107594555,LOC107704172,LOC107658266,LOC107725078,LOC107750295,LOC107567645 coding upstream 124039 205102 ~ 222554 (-)
LOC122344789 LOC107704867,LOC107594577 coding upstream 181305 262368 ~ 272815 (-)
c5h5orf34 LOC107750289,LOC107658216,LOC107567649 coding upstream 192105 273168 ~ 278284 (-)
paip1 paip1,LOC107725119,LOC107704219,LOC107658232,LOC107567649 coding upstream 197888 278951 ~ 286298 (-)
G32102 NA non-coding downstream 50136 25514 ~ 25892 (-)
G32100 NA non-coding downstream 58513 16470 ~ 17515 (-)
G32099 NA non-coding downstream 60723 12703 ~ 15305 (-)
G32098 NA non-coding downstream 64159 11445 ~ 11869 (-)
G32097 NA non-coding downstream 64977 10253 ~ 11051 (-)
G32086 NA non-coding upstream 81427 162490 ~ 204536 (-)
G32150 NA non-coding upstream 269904 350967 ~ 352079 (-)
G32177 NA non-coding upstream 350567 431630 ~ 431890 (-)
G32186 NA non-coding upstream 375054 456117 ~ 482271 (-)
G32187 ugt2b3,ugt2b1,LOC107667397,LOC107725113,LOC107667542,LOC107723313 non-coding upstream 377417 458480 ~ 479881 (-)
G32104 LOC107725162,LOC107594575 other downstream 39680 35777 ~ 36348 (-)
G32103 LOC107725162,LOC107704185,LOC107594575 other downstream 41311 33779 ~ 34717 (-)
G32101 LOC107594575,LOC107725162,LOC107704185 other downstream 52079 20139 ~ 23949 (-)
rictora rictora,LOC107704198,LOC107658248,LOC107567655,LOC107750288,LOC107594576,LOC107725140 other upstream 158888 239951 ~ 261671 (-)
kcnv2b atp5ib,atp5i,atp5ia,kcnv2b,LOC107703581,LOC107725101,LOC107704252,LOC107594594,LOC107723293 other upstream 300989 382052 ~ 387878 (-)
ddr2l ddr2l,LOC107704361,LOC107725118,LOC107550294,LOC107723312,LOC107667359,LOC108444179 other upstream 475591 556654 ~ 583095 (-)
wdr31 wdr31,si:ch73-266o15.4,LOC107653158,LOC107667323,LOC107751417 other upstream 541451 622514 ~ 631126 (-)
castor1 gatsl3,LOC107755828,LOC107726730,LOC107704487 other upstream 1231541 1312604 ~ 1336187 (-)

Expression


Co-expression Network