eif2b1 (eif2b1,LOC107675950,LOC107728130,LOC107702972)


Basic Information

Item Value
gene id eif2b1
gene name eif2b1,LOC107675950,LOC107728130,LOC107702972
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 27510873 ~ 27514550 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240887.1
GAGAAAGACGGCGCCTGTAAGCAGACAAGCGTTGCTGTAACGGATAGAGCCGTTTTGCGAGCAGCTGTTGTCTTCTGATCATCTTCTAGTTTGTGAATGAAATTAATTGTGGTGCTCATTCCGTTACGTTGTGAACAACATTAGGGCAAATATTACCTCTGCTGCGGTCATTATTCGAGCGGAAAAATGTGCGTTTTGTGTCCACGTGCTTCTGCATAACATGCGTTATTATGAGTGAAAGCGTTCATGGAAACAACCGAAGAGCAAAATATTATGGAACGGGATACTTACATGTTAATAACTGACAAACTGGTGGAGTATTTCCGAGCGCAGATCAGAGAAGACCCGGATGTGGCTTCAGCGGTGGCTGCTATCCGATCGCTGCTTGAATTCCTCAAGAGGGATCAAAGTGAGACGATCCTGGGCCTGCGGGAGAACATGACGAAAGCCATACACAGGCTGGAAGAGACGGATTCATCGGTGGCCGTTTCATCTGGAGGAGAGCTCTTCCTGCGCTTCATCAGCCTCACGTCACTGGAACATCCGGACCTCTCACAGTGTAGGAATGTGATGATAGAGCGAGGAGAACTCTTCCTGAAGAAAATATCCCTGTCTAGAGGCAAAGTGGGTAAACTGTGCCACACCTTTATCAAAGATGGAGCCAAAATCCTGACACACTCATCGTCCCGAGTGGTTTTAAAGGTTCTGGAAAACGCAGCGGCTGATAATAAACGCTTCACAGTATACGTCACTGAATCCCAGCCGGATTCAGCGGGtaaACTTATGGCTAAAAAACTATGCAACCTCAATATTCCCGTCACAGTGGTGCTTGACGCTGCAGTCGGGTACATCATGGAGAAGGTTGACCTGGTTATCGTCGGTGCTGAGGGCGTTGTGGAAAGTGGAGGTGTCATAAACAAgATTGGCACCTATCAGATGGCTGTGTGCTCCAAGGCACACAACAAACCATTTTATGTGGTGGCAGAAAGTTTTAAGTTTGTGCGACTCTACCCTCTTAACCAGCAAGACGTACCCGACAGATTCAAGTATAAAGCAGATATCTTGAAAACGGTGAAAGATCTGAACCAAGAGCACCCCATGATCGACTACACCCCTCCATCCCTCATCACGTTACTCTTCACTGACCTCGGTGTGTTGACGCCCTCGGCTGTCAGCGATGAGCTCATCAAACTTTACTTATGATGACGACTGCTCTTCATAAAGCATTTGTATCATTGACACCAACGTGTATATGACCACAAATGCGCCATTAACTCAGAGACCTTGTATTTGGAATACATGTCATAATCCTgaatttaagattaaattatctgtaagaaaaaaaaaa
>XM_043240888.1
tagaagaagaagaagaagaagaagaaagcgcAAGTCCACTTGCTTGCTGCATGGCGttgatagtttaaaataaattaataaaacaaacattgtttTGTTGACAAAGTAGCTAATTTGGAAGCAGTTAATAGGATAAATCTCATTCCTTTGCCAAAGATAAAATATCTCGTCGGCTTTAGCCTCAGGGTGTCATTAGAAAACATTGCATCAGCGACGCGTTGTAAGAGATCTTTGCGGTGAATCGCATCGTTCGTCAACAGAGACGCGTCCAGGAGTTTTAATATGGAAGAAGGAGAACTGGTGGAGTATTTCCGAGCGCAGATCAGAGAAGACCCGGATGTGGCTTCAGCGGTGGCTGCTATCCGATCGCTGCTTGAATTCCTCAAGAGGGATCAAAGTGAGACGATCCTGGGCCTGCGGGAGAACATGACGAAAGCCATACACAGGCTGGAAGAGACGGATTCATCGGTGGCCGTTTCATCTGGAGGAGAGCTCTTCCTGCGCTTCATCAGCCTCACGTCACTGGAACATCCGGACCTCTCACAGTGTAGGAATGTGATGATAGAGCGAGGAGAACTCTTCCTGAAGAAAATATCCCTGTCTAGAGGCAAAGTGGGTAAACTGTGCCACACCTTTATCAAAGATGGAGCCAAAATCCTGACACACTCATCGTCCCGAGTGGTTTTAAAGGTTCTGGAAAACGCAGCGGCTGATAATAAACGCTTCACAGTATACGTCACTGAATCCCAGCCGGATTCAGCGGGtaaACTTATGGCTAAAAAACTATGCAACCTCAATATTCCCGTCACAGTGGTGCTTGACGCTGCAGTCGGGTACATCATGGAGAAGGTTGACCTGGTTATCGTCGGTGCTGAGGGCGTTGTGGAAAGTGGAGGTGTCATAAACAAgATTGGCACCTATCAGATGGCTGTGTGCTCCAAGGCACACAACAAACCATTTTATGTGGTGGCAGAAAGTTTTAAGTTTGTGCGACTCTACCCTCTTAACCAGCAAGACGTACCCGACAGATTCAAGTATAAAGCAGATATCTTGAAAACGGTGAAAGATCTGAACCAAGAGCACCCCATGATCGACTACACCCCTCCATCCCTCATCACGTTACTCTTCACTGACCTCGGTGTGTTGACGCCCTCGGCTGTCAGCGATGAGCTCATCAAACTTTACTTATGATGACGACTGCTCTTCATAAAGCATTTGTATCATTGACACCAACGTGTATATGACCACAAATGCGCCATTAACTCAGAGACCTTGTATTTGGAATACATGTCATAATCCTgaatttaagattaaattatctgtaagaaaaaaaaaa

Function

symbol description
eif2b1 Predicted to contribute to guanyl-nucleotide exchange factor activity and translation initiation factor activity. Predicted to be involved in translational initiation. Predicted to act upstream of or within translation. Predicted to be part of eukaryotic translation initiation factor 2B complex. Human ortholog(s) of this gene implicated in leukoencephalopathy with vanishing white matter. Orthologous to human EIF2B1 (eukaryotic translation initiation factor 2B subunit alpha).

NR:

description
PREDICTED: translation initiation factor eIF-2B subunit alpha

GO:

id name namespace
GO:0019509 L-methionine salvage from methylthioadenosine biological_process
GO:0043087 regulation of GTPase activity biological_process
GO:0006446 regulation of translational initiation biological_process
GO:0005851 eukaryotic translation initiation factor 2B complex cellular_component
GO:0046523 S-methyl-5-thioribose-1-phosphate isomerase activity molecular_function
GO:0005085 guanyl-nucleotide exchange factor activity molecular_function
GO:0003743 translation initiation factor activity molecular_function

KEGG:

id description
K03239 EIF2B1; translation initiation factor eIF-2B subunit alpha

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240887.1 True 1348 mRNA 0.46 9 27510873 27514246
XM_043240888.1 False 1336 mRNA 0.45 9 27510873 27514550

Neighbor

gene id symbol gene type direction distance location
LOC122345447 aldh2.2,aldh2.1,aldh2,LOC107662045,LOC106578507 coding downstream 43459 27457790 ~ 27467414 (-)
mapkapk5 mapkapk5,LOC107702970,LOC107662046,LOC107548527,LOC107556043 coding downstream 53770 27445539 ~ 27457103 (-)
kiss1rb kiss1rb,LOC107728362,LOC107702921 coding downstream 65403 27439081 ~ 27445470 (-)
zgc:153044 NA coding downstream 74423 27434577 ~ 27436450 (-)
tmem116 si:ch211-157p22.10,LOC107740032,LOC107548513,LOC107556047,LOC107728188,LOC107662092,LOC107702969 coding downstream 79257 27421756 ~ 27431616 (-)
dguok LOC107675955,LOC107740006 coding upstream 4215 27518765 ~ 27522039 (-)
mob1a LOC107739988,LOC107675956,LOC107702973,LOC101160416,LOC103363194,LOC107087288,LOC103031464,LOC101481896 coding upstream 7515 27522065 ~ 27525414 (-)
rilpl2 rilpl2,LOC107728107,LOC107702927 coding upstream 27870 27542420 ~ 27545250 (-)
ythdc1 ythdc1,LOC107693408,LOC107702977,LOC107728241 coding upstream 61188 27575738 ~ 27589910 (-)
LOC122345116 ugt2a3,LOC107728060,LOC107702979,LOC107556030,LOC107728043,LOC107556031,LOC107702978,LOC107548539 coding upstream 79043 27593593 ~ 27604409 (-)
G39893 NA non-coding downstream 224679 27285182 ~ 27286194 (-)
G39888 NA non-coding downstream 243644 27265289 ~ 27267229 (-)
G39872 NA non-coding downstream 276711 27232658 ~ 27234162 (-)
G39870 NA non-coding downstream 285311 27224887 ~ 27225562 (-)
G39857 NA non-coding downstream 321651 27188850 ~ 27189222 (-)
G39935 NA non-coding upstream 23938 27538488 ~ 27538861 (-)
G39936 NA non-coding upstream 24390 27538940 ~ 27539327 (-)
G39951 rgs3a,LOC107702900,LOC107728018,LOC107556028,LOC107558862,LOC107693410 non-coding upstream 135900 27650450 ~ 27650827 (-)
G39964 NA non-coding upstream 233910 27748460 ~ 27789829 (-)
G40021 NA non-coding upstream 381093 27895643 ~ 27895961 (-)
isca1 isca1,LOC107702919,LOC107662049 other downstream 112132 27382921 ~ 27398741 (-)
LOC122345426 smpx,LOC107705278,LOC107671350,LOC107590224,LOC107663668,LOC107586736,LOC107721880 other downstream 403488 27099815 ~ 27107385 (-)
LOC122344921 NA other downstream 1942187 25561974 ~ 25568686 (-)
G39413 LOC102215562 other downstream 2228587 25281886 ~ 25282286 (-)
LOC122345923 NA other downstream 2752205 24754202 ~ 24758668 (-)
LOC122344874 NA other upstream 371491 27886041 ~ 27895454 (-)
G40080 pappaa,pappa,LOC107556005,LOC107558864,LOC107739977,LOC107675511,LOC107728218 other upstream 741278 28255828 ~ 28264704 (-)
LOC122345120 LOC107728794,LOC107696375,LOC107590009,LOC107739482 other upstream 1809432 29323982 ~ 29326115 (-)
G40182 brinp1,LOC107715673,LOC107674904 other upstream 1946035 29460585 ~ 29490204 (-)
eng LOC107562335,LOC107704777,LOC107741503 other upstream 2100169 29614719 ~ 29655061 (-)

Expression


Co-expression Network