gltpa (gltpa,gltp,LOC107752155,LOC107654619,LOC107741237,LOC107597288,LOC107595968)


Basic Information

Item Value
gene id gltpa
gene name gltpa,gltp,LOC107752155,LOC107654619,LOC107741237,LOC107597288,LOC107595968
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 5843678 ~ 5849639 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240923.1
GCAGTCCAGCTGTGCGGCGCAGCGCGAGAAGAAGAAGTGATTGTATGCCGTCTGTCGGTCCCGCGGTAGTTCCGGGTTCTGTCTTCGCTGCCTCCGCGTTGTCCTCGTCTTATGttgtaggcaaaaaaaaaaaaaaaaagtcactttagCCCTCTTTAGGCGACCATGGCTCTTCTAATGGAGCACCAGTTCCGGCAACTTCCAGCCGACAAACAAGTGGAAACCCGGCCGTTTCTCGAGGCGGTTTCTCACCTTCCTCCTTTCTTCGATTGCCTCGGCTCTgctgttttttcccccatcaAAGCTGATATCGCGGGTAACATCACTAAAATCAAGGCCGTGTATGACAGCAACCCTACCAGGTTTAAAACCTTGCAACACATTTTGGAAGCAGAGAAGGAGATGCATGGAGCCGAGTGGCCAAAAGTTGGAGCAACACTTGCCCTCATGTGGCTGAAAAGGGGGCTACGCTTTATCCAGGTTCTTCTCCAGAGCCTAGTGGATGGGGATAAAGACGAAAACAACCCTAATCTCATCAGAGTCAACGTCACCAAAGCGTATGAAATGGCACTGAAGAAGTATCATGGCTGGTTTGTCCAGAAGCTCTTTAAAgcagcGCTATACGCCGCTCCTTACAGATCAGATTTTCTCAAAGCTCTTTCTAAAGGCCGAGAGGTCAAGGAGGAAGAATGCTTGGACAAAGTGCGGCAGTTCCTAGTAAACTTCACAGCTACGATCGACGCCATCTATGAAATGTACACCAAGATGAATGCAGAGCTGGACTACACTGTGTGATCTCACATTCACGGGCGAGCAAACTTCAGACCTCATCTACTGCTGTCCCGCTGGATCTCTGTTGCCTCCCTGTAGACGTCTCCTTAGTCTCCGCTCTTATCTCGTACTGGATCCTGCGTCTCTGGCAGTGTACCGCCGCGTTTTCTCTCGGGGAACAATTAAGGTCCTGGCTGCTGAAGACTTTGGTGGATTTGGAAGGGAAGGATGTGTGTTATTTGTTCTGCTCGTGTTGACTGTTTGAATGCTTTGGCTTTTCTTTAGAAAAGACGGTTTGCGagtgtttttttataactttaacTACTAATCATTTCTCTTTGATTCTCGATACATGCACTTTAAGTCTGTGTATGGAATGGCTCTGTATGTGTTCCTTTAATAATGTATTGCAAATGAgggttttctttttactttttaattataccAAAACAAACGTCTACAAGACTGTCTAACCAAATATCTGACATTGACTGTACTGCTGTTAGTTTTTACTCTGAATTctattttatgacaaaaaaaaatacttgaatgtgacatgaaatataaaagaaaccACTTCCTCAGAAGCGATAATGAAGCCACTACATTAAGTGGTGAAACGgtaaataatttcttaataaaaattTGTTTCAATAAGGACTTCTTAAGACTGTAATGAAAAACTGTGAATCTTCATAGACGTAATTGGTCTGATGTTTTGTTGATGTAATGTAGTGGATGagtattgtttgtttgtagggtttttttttttttttttttttgtcattcctGAATGTTGATTTCATTCAAACtgctttttagaaataaatgttaatttatggaAATAA

Function

symbol description
gltpa Orthologous to human GLTP (glycolipid transfer protein).
gltp Enables glycolipid binding activity; identical protein binding activity; and lipid transfer activity. Involved in intermembrane lipid transfer. Located in cytosol.

NR:

description
glycolipid transfer protein

GO:

id name namespace
GO:0046836 glycolipid transport biological_process
GO:0005737 cytoplasm cellular_component
GO:0017089 glycolipid transfer activity molecular_function
GO:0051861 glycolipid binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240923.1 True 1619 mRNA 0.42 5 5843678 5849639

Neighbor

gene id symbol gene type direction distance location
trpv4 trpv4,LOC107752140,LOC107741238,LOC107654595,LOC107672638 coding downstream 681 5820352 ~ 5842997 (-)
mmab LOC107752154,LOC107597358,LOC107654603,LOC107672637,LOC107741242,LOC107595926 coding downstream 172549 5668793 ~ 5671129 (-)
kctd10 kctd10,LOC107597295,LOC107595924,LOC107672630,LOC107752136 coding downstream 190649 5648255 ~ 5653029 (-)
foxn4 foxn4,LOC107654613 coding downstream 214392 5621069 ~ 5629286 (-)
LOC122345133 LOC107752131,LOC107684984,LOC107595918,LOC107672624,LOC107741247 coding downstream 388922 5435977 ~ 5454756 (-)
git2a git2,git2a,LOC107595928,LOC107752141,LOC107597287 coding upstream 9640 5859279 ~ 5884164 (-)
slc6a4b slc6a4b,LOC107654599,LOC107597334,LOC107595929,LOC107672619,LOC107741230,LOC108434249,LOC106580268 coding upstream 49256 5898895 ~ 5909991 (-)
trnak-uuu_104 NA coding upstream 106660 5956299 ~ 5956371 (-)
foxd1 foxd1,LOC107598200,LOC107718663,LOC107700903,LOC107596217,LOC107757501 coding upstream 237162 6086801 ~ 6089556 (-)
ankra2 ankra2,LOC107757524,LOC107655931,LOC107596806,LOC107718646,LOC107700928,LOC107596181 coding upstream 246518 6096157 ~ 6099701 (-)
G33446 NA non-coding downstream 159394 5679683 ~ 5684284 (-)
G33434 NA non-coding downstream 188914 5654080 ~ 5654764 (-)
G33423 acacb,LOC107752147,LOC107654593 non-coding downstream 222973 5618265 ~ 5620705 (-)
G33409 LOC107684993,LOC107597297,LOC106585658 non-coding downstream 241474 5601409 ~ 5602204 (-)
LOC122344983 LOC107684988,LOC107597340,LOC107752133,LOC107741245,LOC107672606 non-coding downstream 248504 5588045 ~ 5595174 (-)
G33533 NA non-coding upstream 46489 5896128 ~ 5897353 (-)
G33542 NA non-coding upstream 96350 5945989 ~ 5946874 (-)
G33544 NA non-coding upstream 103637 5953276 ~ 5959213 (-)
G33549 NA non-coding upstream 119603 5969242 ~ 5982803 (-)
G33610 NA non-coding upstream 322505 6172144 ~ 6172412 (-)
G33175 NA other downstream 1220620 4622490 ~ 4623058 (-)
LOC122346168 srrm4,LOC107720865,LOC107702227,LOC107561260,LOC107656798 other downstream 1650597 4144856 ~ 4193081 (-)
piwil2 piwil2,LOC107560971,LOC107707823,LOC107702219 other downstream 1945100 3878650 ~ 3898578 (-)
coq5 coq5,LOC107560969,LOC107707852,LOC107656810,LOC107561264,LOC107702223,LOC107707851,LOC107560965,LOC101158254,LOC107755815,LOC107561265 other downstream 2090914 3744675 ~ 3752764 (-)
G32908 sema4c,LOC107697240,LOC107708238,LOC107699920 other downstream 2883501 2951462 ~ 2960177 (-)
G33758 LOC107596916,LOC107710760,LOC107700938,LOC107587412,LOC107693817 other upstream 974532 6824171 ~ 6826182 (-)
usp20 usp20,LOC107691016,LOC107693839,LOC107710745 other upstream 1073207 6922846 ~ 6943203 (-)
G33998 LOC108444092 other upstream 1532707 7382346 ~ 7397153 (-)
LOC122345606 LOC107712378 other upstream 1857331 7706970 ~ 7711824 (-)
si:dkey-220k22.3 NA other upstream 1868926 7718565 ~ 7721758 (-)

Expression


Co-expression Network