LOC122344701


Basic Information

Item Value
gene id LOC122344701
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 30959444 ~ 30963507 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006250921.1
TGCGGCGGAGGCACACCGGCTCTGCGGAAGGATACGCGCACGCAATAACAACAGCGCAGCGCAGCTGCTGCAAACCGGCTGGCGGAGGAATACGACACAGCTGCACGGtctgCATGTGGATCtaatggtggatcagcaccgaGAGATGATGTCTACAGCCCTGACCGCGATTGGAGACCAGAACCACTAGATGAgaaaataaaagcactgcCACCTGTTCTGAGAGTCACTGAGGGATAAAGAACAAACTTCAGCGACTGAGCGATATCCGCTGAGATGAATCTGCTTTCCTGGCTTCTGCATTTCTAAATAAGTCTGGCTGGGATTTCGTGTTTCATTGTATGCGTTTTCACATCGCCTTTCTCTCTAAATCCTGACTGGTTGATGACGGGATGCCTGCACGCTAGCGGTCGAACTGCCTTTCGGGCATTACCTTCAGCAAGCGTGAAAACAACACTAAAGACTTTTTAGGCTATTTGGAAATCCCGGACCGGACTGCGGCCTTCAGATGAACTCTTACTGGACTGAAGGAGCTCAGCTTTATTTGATTCTGGATCAGTCGTTAAATCAGCGCTCTCATCTCGAATCTGATCATCAGCATCTTTTGAGTTCCAGAAGCTTGACTTTTGCTTCACAagcctccaaaacatctcacatcttctgaggagccttGATTTCTTCATTTCTCAATCAGCATTGCATGTTTAGCTCATGTTTGCTGGAGATATAGCGACCcctgatatttatataattttatgtcaGTATGTGCCGTATAATGTATTGCTCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006250921.1 True 788 lncRNA 0.47 3 30959444 30963507

Neighbor

gene id symbol gene type direction distance location
cux2a NA coding downstream 7956 30942514 ~ 30951488 (-)
LOC122344688 LOC107743064,LOC107698017,LOC107734413 coding downstream 17562 30920817 ~ 30941882 (-)
rabepk rabepk,LOC107743065,LOC107579283 coding downstream 123710 30831189 ~ 30835734 (-)
LOC122344907 NA coding downstream 189537 30765631 ~ 30769907 (-)
golga2 golga2,LOC107658391 coding downstream 204504 30734104 ~ 30754940 (-)
mcc mcc,LOC106565572 coding upstream 15086 30978593 ~ 31052589 (-)
rcl1 rcl1,LOC107701854,LOC107655287 coding upstream 90417 31053924 ~ 31064355 (-)
LOC122344691 NA coding upstream 110536 31074043 ~ 31081265 (-)
rplp0 rplp0,LOC107654305 coding upstream 145216 31108723 ~ 31112733 (-)
gusb gusb,LOC107719352,LOC107701859,LOC107654306,LOC107734369,LOC104964597,LOC107591494 coding upstream 179070 31142577 ~ 31155113 (-)
G40760 LOC108429729,LOC107563441 non-coding downstream 34247 30920851 ~ 30925197 (-)
LOC122344700 LOC108429729,LOC107563441 non-coding downstream 34247 30921178 ~ 30925197 (-)
G40762 NA non-coding downstream 39844 30866243 ~ 30919600 (-)
G40751 hspa5,LOC107687227,LOC107567952 non-coding downstream 112566 30821125 ~ 30846878 (-)
G40739 NA non-coding downstream 187420 30770714 ~ 30772024 (-)
LOC122344702 NA non-coding upstream 10811 30974318 ~ 30974883 (-)
G40782 NA non-coding upstream 14102 30977609 ~ 30978322 (-)
G40794 NA non-coding upstream 74898 31038405 ~ 31039457 (-)
G40798 NA non-coding upstream 124685 31088192 ~ 31094923 (-)
LOC122344940 NA non-coding upstream 257310 31220817 ~ 31222257 (-)
G40752 hspa5,LOC107686379,LOC107743071,LOC107687227,LOC107567952,LOC107734417,LOC107734415,LOC107686377 other downstream 133086 30817732 ~ 30826358 (-)
G40713 lzts3,LOC107567954,LOC107687254,LOC107574519,LOC795227,LOC107665914 other downstream 166725 30789633 ~ 30792719 (-)
G40711 NA other downstream 226084 30631028 ~ 30733360 (-)
fubp3 fubp3,LOC107689604,LOC107687236,LOC106566971 other downstream 346303 30590843 ~ 30613141 (-)
rnf170 rnf170,LOC107721034,LOC107687247 other downstream 865868 30087966 ~ 30093576 (-)
LOC122344987 LOC107591496,LOC107663763,LOC107725109,LOC107734348,LOC107563429,LOC107654309 other upstream 367842 31331349 ~ 31350449 (-)
apooa apoo other upstream 738946 31702453 ~ 31711737 (-)
G41035 LOC107734367,LOC107665727,LOC107725151,LOC107591476,LOC107654325,LOC563292 other upstream 757763 31721270 ~ 31722906 (-)
tnca zmp:0000000846,LOC107715542,LOC107557573,LOC107591511,LOC102306937,LOC107725145 other upstream 1150389 32113896 ~ 32174064 (-)
LOC122346090 LOC107704013,LOC107725152,LOC107748063,LOC107654332,LOC107557589,LOC107594564 other upstream 1250524 32214031 ~ 32293782 (-)

Expression


Co-expression Network